Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32026
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1025 - 10506144-10506226,10506643-10506699,10507502-105076...    32   0.31 
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    29   2.9  
01_06_0006 - 25517892-25517935,25518156-25518276,25518598-255187...    28   3.9  
05_01_0155 + 1043045-1043240,1043325-1043401,1043963-1044092,104...    28   5.1  
10_08_0188 - 15596062-15597084,15597513-15597791                       27   6.8  
04_03_0664 + 18501248-18502802,18503370-18505054                       27   6.8  

>12_01_1025 -
           10506144-10506226,10506643-10506699,10507502-10507605,
           10507884-10507937,10508107-10508193,10509027-10509214,
           10509793-10509854,10510084-10510354,10510756-10510834,
           10511715-10511913,10512816-10512960,10513324-10513416,
           10514449-10514736
          Length = 569

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 373 ETFYXTACFARVHLNQGQFLYAF-YIAVIQRSDCHGF 480
           ETF+ TAC  R HL QG+ + A+ Y+   +  DC GF
Sbjct: 427 ETFFTTACMGRGHLCQGKLVDAYRYLHKEKDMDC-GF 462


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +3

Query: 390 CLFCACASQSRSILVCLLHRCYPA 461
           CLFC     SR ILVC L RC  A
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVA 81


>01_06_0006 -
           25517892-25517935,25518156-25518276,25518598-25518733,
           25519189-25519280,25519358-25519426,25519710-25519821,
           25519897-25520015,25520302-25520355,25520811-25520891,
           25520968-25521051,25521124-25521315,25521633-25521746,
           25521832-25521978,25522066-25522302,25522762-25522810,
           25522894-25523027,25523124-25523324,25523532-25523701,
           25523773-25523875,25524198-25524361,25525015-25525055,
           25525144-25525187
          Length = 835

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +1

Query: 208 EMNMDNYTNKKAVEEFLKMYRTGF----MPKNLEFSVFYDKMRDEAI 336
           E +   Y NK   +EFLK+   GF    + K LE     D M + A+
Sbjct: 695 ERDFRRYINKLGYKEFLKLPEMGFGTSLLQKRLEIETMTDNMSELAV 741


>05_01_0155 +
           1043045-1043240,1043325-1043401,1043963-1044092,
           1044376-1044473,1045622-1045729,1045748-1045800,
           1046876-1047080
          Length = 288

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 509 GYTSHGAGTTKPWQSE 462
           G+TSHG G T  WQS+
Sbjct: 243 GWTSHGGGRTGNWQSQ 258


>10_08_0188 - 15596062-15597084,15597513-15597791
          Length = 433

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 33  WACSRRAQQCSTKAEHHKDKKCG 101
           W C RR +Q ++  ++H D+K G
Sbjct: 206 WHCQRRVRQPNSLCDYHSDQKRG 228


>04_03_0664 + 18501248-18502802,18503370-18505054
          Length = 1079

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 105 GIHIFCLYGARLWYCTAEHDGYKPSQNPRQTS 10
           G+  F L   RL  CT+ H  ++   NPR+TS
Sbjct: 145 GVERFVLLVDRLDSCTSRHVCHQEVSNPRETS 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,739,802
Number of Sequences: 37544
Number of extensions: 219245
Number of successful extensions: 496
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)