Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32025
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    26   0.17 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    26   0.17 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    26   0.17 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    26   0.17 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    26   0.17 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           26   0.17 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    26   0.17 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    26   0.17 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.6  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +3

Query: 357 GIQHCSPARREAYHFPCQSHPHTLPARXXHPHTLPA 464
           G  + +P     Y   C S P   P    HP+  PA
Sbjct: 26  GTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPA 61


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +3

Query: 357 GIQHCSPARREAYHFPCQSHPHTLPARXXHPHTLPA 464
           G  + +P     Y   C S P   P    HP+  PA
Sbjct: 26  GTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPA 61


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +3

Query: 357 GIQHCSPARREAYHFPCQSHPHTLPARXXHPHTLPA 464
           G  + +P     Y   C S P   P    HP+  PA
Sbjct: 26  GTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPA 61


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +3

Query: 357 GIQHCSPARREAYHFPCQSHPHTLPARXXHPHTLPA 464
           G  + +P     Y   C S P   P    HP+  PA
Sbjct: 26  GTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPA 61


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +3

Query: 357 GIQHCSPARREAYHFPCQSHPHTLPARXXHPHTLPA 464
           G  + +P     Y   C S P   P    HP+  PA
Sbjct: 26  GTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPA 61


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +3

Query: 357 GIQHCSPARREAYHFPCQSHPHTLPARXXHPHTLPA 464
           G  + +P     Y   C S P   P    HP+  PA
Sbjct: 26  GTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPA 61


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +3

Query: 357 GIQHCSPARREAYHFPCQSHPHTLPARXXHPHTLPA 464
           G  + +P     Y   C S P   P    HP+  PA
Sbjct: 26  GTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPA 61


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +3

Query: 357 GIQHCSPARREAYHFPCQSHPHTLPARXXHPHTLPA 464
           G  + +P     Y   C S P   P    HP+  PA
Sbjct: 26  GTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPA 61


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 121 VSPFVYXPGRYVADPXRYDPSR 186
           +S   Y P  Y  DP +YDP R
Sbjct: 393 ISGLHYDP-EYYPDPEKYDPER 413



 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 115 STVSPFVYXPGRYVADPXRYDP 180
           S V  FV+ P      P R+DP
Sbjct: 453 SVVKDFVFDPTERTPVPLRFDP 474


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/29 (27%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = +1

Query: 133 VYXPGRYVADPXRYDPSR---DNSGRYIP 210
           ++   +Y  DP ++DP R   +N  + +P
Sbjct: 383 IHRDPQYFPDPEKFDPERFSDENKAKIVP 411


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = -3

Query: 460 GNVCGCXXLAGNVCGCD--WHGKW*ASRRAGEQCWIPCKHXQGIC 332
           G VC      G +C C    +G         E    PCKH   IC
Sbjct: 388 GGVCRISDGGGYICDCPSGTNGTNCEIDTINECDSNPCKHLDAIC 432



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 18  GNACLFGNLPVSDSGAGRRNWKV 86
           GN C  G  P ++  A  R W+V
Sbjct: 515 GNDCSLGINPWANCTASTRCWEV 537


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 427 NVCGCDWHGKW 395
           N+   D+HGKW
Sbjct: 275 NLMAYDFHGKW 285


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 36  GNLPVSDSGAGRRNWK 83
           G  P   SG GR+ WK
Sbjct: 69  GGGPRFSSGVGRKAWK 84


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 36  GNLPVSDSGAGRRNWK 83
           G  P   SG GR+ WK
Sbjct: 69  GGGPRFSSGVGRKAWK 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,109
Number of Sequences: 336
Number of extensions: 1850
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)