Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32025
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1054 + 30437468-30437763,30438647-30438779,30439099-304391...    29   2.2  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    29   2.9  
09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724...    24   4.3  
07_01_0878 + 7288950-7289231                                           28   5.1  
03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104...    27   8.9  

>04_04_1054 +
           30437468-30437763,30438647-30438779,30439099-30439159,
           30439370-30439483,30439813-30439971,30440124-30440206,
           30440423-30440549,30440872-30440951,30441027-30441113,
           30441316-30441440,30441543-30441603,30441806-30441859,
           30441946-30442023,30442449-30442554,30442655-30442803,
           30442945-30443052
          Length = 606

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +3

Query: 9   ITTGNACLFGNLPV----SDSGAGRRNWKVH 89
           ++TG  CL G+ PV      SG+G  NW VH
Sbjct: 250 VSTGAVCLDGSPPVYHFSPGSGSGANNWLVH 280


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 479 WVGPPCWQRMWVXP 438
           W    CWQRMWV P
Sbjct: 14  WPTASCWQRMWVHP 27


>09_02_0322 -
           7240125-7241568,7242043-7243253,7245782-7246144,
           7246502-7246522
          Length = 1012

 Score = 23.8 bits (49), Expect(2) = 4.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 363 QHCSPARREAYHFPCQSHPHTLPAR 437
           +H   + RE  H   Q HP  LP+R
Sbjct: 712 KHPPDSHREIAHDKQQQHPDVLPSR 736



 Score = 22.6 bits (46), Expect(2) = 4.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 444 HPHTLPARWS 473
           HP  LP+RWS
Sbjct: 729 HPDVLPSRWS 738


>07_01_0878 + 7288950-7289231
          Length = 93

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 83  FPVSAASATVRDRQIAKKTRISRCYEA 3
           FPVSA +  V  R++A   R+SRC  A
Sbjct: 52  FPVSAQAQMVVQRELAAVGRLSRCRSA 78


>03_05_1143 +
           30709825-30709926,30710105-30710260,30710356-30710439,
           30710769-30710882,30711019-30711111,30711888-30711977,
           30712157-30712227,30712300-30712374,30712481-30712568,
           30712748-30712806,30712893-30712956,30713030-30713095,
           30713283-30713435,30713522-30713626,30713739-30713974,
           30714104-30714173,30714286-30714339,30714501-30714557,
           30714662-30714741,30716056-30717919
          Length = 1226

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -1

Query: 129 WRNSRVNSVVLERSVLS---SFGGQRHCQRQADCQKDT 25
           W+++ V  V+  R + S   S  GQ+ C RQ  CQ  T
Sbjct: 28  WKDNNVQVVIRVRPLSSGEISVQGQKRCVRQDSCQSIT 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,306,615
Number of Sequences: 37544
Number of extensions: 220969
Number of successful extensions: 630
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)