Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32024
         (401 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   3.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   3.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   7.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 170 YPGYPGFNGVP 138
           +PGYP F G P
Sbjct: 365 FPGYPFFGGFP 375


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 145 PLKPGYPGYPFSP 183
           PL+P  P YPF P
Sbjct: 202 PLQPFPPPYPFYP 214


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 383 NWVPGPPSRLVLSDGVP 333
           +++PGPP   ++S  +P
Sbjct: 37  SYLPGPPVNDIISGNIP 53


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +3

Query: 42  LWSLL*CTLYSNITSHTWVPI 104
           +W+ L  T+  ++  H W+P+
Sbjct: 531 IWNPLTDTIPIHVWIHPWIPL 551


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,113
Number of Sequences: 336
Number of extensions: 2350
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)