Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32024
(401 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 1e-15
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 77 5e-15
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 75 2e-14
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-14
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 4e-14
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 73 9e-14
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 9e-14
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 9e-14
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 2e-13
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 72 2e-13
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 8e-13
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-12
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 3e-12
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 4e-12
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 8e-12
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 65 2e-11
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 3e-11
SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13) 64 5e-11
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 63 7e-11
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 63 7e-11
SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 9e-11
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 62 1e-10
SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45) 61 4e-10
SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18) 60 5e-10
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 60 7e-10
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09) 59 2e-09
SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 5e-09
SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 5e-09
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 8e-09
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 56 1e-08
SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29) 55 2e-08
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 55 2e-08
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-08
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 3e-08
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 52 2e-07
SB_1366| Best HMM Match : Collagen (HMM E-Value=6.2e-05) 51 3e-07
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 51 4e-07
SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12) 51 4e-07
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 7e-07
SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10) 50 9e-07
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12) 49 2e-06
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04) 48 3e-06
SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 47 7e-06
SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09) 46 9e-06
SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07) 45 3e-05
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 45 3e-05
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 44 4e-05
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06) 44 6e-05
SB_36020| Best HMM Match : Collagen (HMM E-Value=0.31) 43 1e-04
SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) 43 1e-04
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 42 2e-04
SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027) 42 2e-04
SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024) 41 4e-04
SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14) 40 8e-04
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 40 0.001
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07) 38 0.002
SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036) 38 0.002
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 38 0.003
SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003) 38 0.004
SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048) 38 0.004
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 36 0.009
SB_1292| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.009
SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029) 36 0.012
SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042) 35 0.022
SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.029
SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04) 35 0.029
SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.038
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 34 0.050
SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.050
SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018) 34 0.050
SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05) 33 0.066
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 33 0.066
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.066
SB_50127| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_45152| Best HMM Match : DUF320 (HMM E-Value=2.9) 33 0.12
SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.15
SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14) 32 0.15
SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078) 32 0.15
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.20
SB_11354| Best HMM Match : Collagen (HMM E-Value=0.09) 31 0.27
SB_10146| Best HMM Match : Collagen (HMM E-Value=0.09) 31 0.27
SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 31 0.35
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022) 31 0.46
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 31 0.46
SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035) 31 0.46
SB_33814| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 30 0.61
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.61
SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013) 30 0.61
SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01) 30 0.81
SB_4609| Best HMM Match : EGF (HMM E-Value=8.9e-07) 30 0.81
SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56) 29 1.4
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 29 1.4
SB_38267| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_57480| Best HMM Match : MFS_1 (HMM E-Value=0.0025) 29 1.9
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_28449| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_46911| Best HMM Match : MSSP (HMM E-Value=4.4) 29 1.9
SB_27528| Best HMM Match : Epimerase (HMM E-Value=3.2e-06) 29 1.9
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 28 2.5
SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59) 28 2.5
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_12996| Best HMM Match : PHZA_PHZB (HMM E-Value=8.6) 28 2.5
SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031) 28 3.3
SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031) 28 3.3
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 28 3.3
SB_44152| Best HMM Match : CRAM_rpt (HMM E-Value=0.021) 28 3.3
SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11) 28 3.3
SB_56576| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_55803| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_583| Best HMM Match : Collagen (HMM E-Value=0.0088) 27 4.3
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 27 4.3
SB_23149| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_43153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 27 5.7
SB_45669| Best HMM Match : RVT_1 (HMM E-Value=0.14) 27 5.7
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 27 5.7
SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18) 27 5.7
SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0) 27 5.7
SB_57619| Best HMM Match : DUF229 (HMM E-Value=0) 27 7.6
SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017) 27 7.6
SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_40832| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19) 27 7.6
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 26 10.0
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 26 10.0
SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_35485| Best HMM Match : CRAM_rpt (HMM E-Value=1) 26 10.0
SB_24324| Best HMM Match : PDZ (HMM E-Value=0.013) 26 10.0
SB_3202| Best HMM Match : AFP (HMM E-Value=2.9) 26 10.0
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 79.0 bits (186), Expect = 1e-15
Identities = 53/131 (40%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
PGPP G+PG PG + L G+ G G+ G +GD G +GPPG G + G
Sbjct: 967 PGPP-------GLPGRPGLKGERGRDGLDGQNGLPGIPGPKGDTGPVGPPGRPG---LPG 1016
Query: 194 IYAK----------GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQG 48
K GEKGY G PG G G KG+ G G G PG G G +G +QG
Sbjct: 1017 PVGKEGPPGEDGNIGEKGYAGLPGPRGETGEKGLDGPSGPPGTPGQPGPPGPRGPEGRQG 1076
Query: 47 PKGFKGFSGEK 15
GFKG GEK
Sbjct: 1077 FPGFKGNQGEK 1087
Score = 74.1 bits (174), Expect = 4e-14
Identities = 46/112 (41%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYP 165
G G+PG + +A G+ GD G G +G KG+ GPPG GE + G KG G P
Sbjct: 525 GPTGFPGTKGNQGIAGPPGQIGDPGKMGPQGFKGDPGPPGPPGEVGVPGAPGMKGPIGKP 584
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKE 12
G G G PG KG RG G PGM G G +G ++GP GF G G+ +
Sbjct: 585 GPVGDAGAPGEKGARG-LSIQGTPGMDGKRGPRGPIGEKGPTGFPGPPGDSD 635
Score = 73.3 bits (172), Expect = 7e-14
Identities = 48/118 (40%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
GPP R DG+ G PG + G +GD+G G G+ G GPPG G G
Sbjct: 903 GPPGR----DGMKGDPGPRGRDGLPGEPGARGDIGSRGLPGEDGPRGPPGIQGMKGAKGD 958
Query: 191 YAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G PG PG G PG KG RG G DG G+ G G +G T GP G G G
Sbjct: 959 AITGPTGPPGPPGLPGRPGLKGERGRDGLDGQNGLPGIPGPKGDTGPVGPPGRPGLPG 1016
Score = 73.3 bits (172), Expect = 7e-14
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATP---DIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLI 201
GPP L + G PG G T + +A L G KG+ GL G +G GE G PG +G
Sbjct: 1364 GPPG-LNGNPGAPGVDGPTGPKGESGIAGLDGPKGEPGLPGRDGPAGEKGSPGLSG---- 1418
Query: 200 DGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ-QGPKGF-KGF 27
+G+KG G PG +G PG +G RG G G PG G+ G+ G +G +G+ KG
Sbjct: 1419 ----LRGDKGDRGLPGPSGPPGEEGARGSDGFPGIPGSKGERGLIGPKGIKGERGYGKGI 1474
Query: 26 SGEKEEK 6
G + EK
Sbjct: 1475 PGPRGEK 1481
Score = 72.1 bits (169), Expect = 2e-13
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYP 165
G+PG G + IP GE+G +G G G G G G GE+ + G+ GEKG
Sbjct: 1292 GIPGLNGLS-GIP-----GERGPVGPAGPPGLPGRAGQAGPKGETGLPGMPGLDGEKGSA 1345
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEE 9
G PG G PG +G +GDQG G G G G+ G T +G G G G K E
Sbjct: 1346 GVPGIPGGPGGRGFKGDQGPPGLNGNPGAPGVDGPTGPKGESGIAGLDGPKGE 1398
Score = 69.3 bits (162), Expect = 1e-12
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-------K 183
G+PG G T + + G KG+ G G+ G G G PG G++ I+G+
Sbjct: 1142 GIPGQRGLTGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPA 1201
Query: 182 GEKGYPGYPGFN--GVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSG 21
G +G G PG G+PG G +G++G +G+PG+ G G+QG GP G GF+G
Sbjct: 1202 GVQGVKGDPGVGQPGLPGPAGPKGERGVNGFPGIKGIQGVQGLEGPPGPPGPPGQIGFTG 1261
Query: 20 EKEEK 6
K K
Sbjct: 1262 AKGSK 1266
Score = 68.1 bits (159), Expect = 3e-12
Identities = 43/110 (39%), Positives = 52/110 (47%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
+G PG PG I G KGD G E +G GP G TG AKG++G P
Sbjct: 1245 EGPPGPPGPPGQIGFTGAKGSKGDQGELVIE--RGAPGPRGNTG--------AKGDRGIP 1294
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 15
G G +G+PG +G G G G PG G G +G + G G G GEK
Sbjct: 1295 GLNGLSGIPGERGPVGPAGPPGLPGRAGQAGPKG--ETGLPGMPGLDGEK 1342
Score = 67.7 bits (158), Expect = 3e-12
Identities = 52/123 (42%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Frame = -1
Query: 374 PGPPSR--LVLSDGVPGWPGATPDIP-MAFLFGEKGDMGLTGEEGDKGEIGPPGETGESL 204
PG P + S G+PG P P P A G G GL G G KGE GP GE GE
Sbjct: 684 PGLPGEDGAIGSRGLPG-PSGEPGKPGPAGRAGLAGQDGLPGTPGTKGEPGPTGEKGEVF 742
Query: 203 -IDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 30
I G AKG++G G PG G+ G G G+QG G PG G G +QGP G G
Sbjct: 743 RIKGEKGAKGQQGGIGNPGPPGLRGDVGPPGEQGPTGVPGESWTSGGVGQIKQGPPGDPG 802
Query: 29 FSG 21
G
Sbjct: 803 NPG 805
Score = 65.7 bits (153), Expect = 1e-11
Identities = 41/103 (39%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK------GEKGYPGYPGFNGVPGRKG 126
G G GL G+ G GE GP G GES G + G+ G PG G G PGR G
Sbjct: 758 GNPGPPGLRGDVGPPGEQGPTGVPGESWTSGGVGQIKQGPPGDPGNPGTDGLPGAPGRDG 817
Query: 125 I---RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
I RG +G G GM G+ G+ GP G G +GE+ K
Sbjct: 818 IDGVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPGVTGEQGVK 860
Score = 64.5 bits (150), Expect = 3e-11
Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Frame = -1
Query: 377 VPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
+PGP G PG PG + G G+ G GE+G G GP GETGE +D
Sbjct: 996 IPGPKGDTG-PVGPPGRPGLPGPVGKE---GPPGEDGNIGEKGYAGLPGPRGETGEKGLD 1051
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ----QGPKGFKG 30
G G G PG PG G G +G +G G G G G +G GTS+ GPKG G
Sbjct: 1052 G--PSGPPGTPGQPGPPGPRGPEGRQGFPGFKGNQGEKGRMGPPGTSEPGNVPGPKGDPG 1109
Query: 29 FSGEK 15
+G +
Sbjct: 1110 PAGPR 1114
Score = 64.5 bits (150), Expect = 3e-11
Identities = 43/106 (40%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = -1
Query: 326 PGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGF 150
PG D A G G G+ G G KGE G GE G++ I G G G PG G
Sbjct: 1102 PGPKGDPGPAGPRGPAGRNGIDGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGL 1161
Query: 149 NGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
G PGR G G G G PG G GI G GP G G G K
Sbjct: 1162 KGEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPAGVQGVK 1207
Score = 64.5 bits (150), Expect = 3e-11
Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGE-SLIDGIYA-KGEKGY 168
G+PG P P A G G G+ G +G++G IGP G GE GI +GEKG
Sbjct: 1427 GLPG-PSGPPGEEGAR--GSDGFPGIPGSKGERGLIGPKGIKGERGYGKGIPGPRGEKGD 1483
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
G+PG NG PG G RG +G+ G PG G G G
Sbjct: 1484 SGFPGINGPPGPPGQRGYEGARGPPGAKGQAGEDG 1518
Score = 64.5 bits (150), Expect = 3e-11
Identities = 45/120 (37%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIG-------PPGETGESLIDGIYAK 183
G PG GA + G KG+ GL G +G KGE G P GE G+S GI
Sbjct: 1433 GPPGEEGARGSDGFPGIPGSKGERGLIGPKGIKGERGYGKGIPGPRGEKGDSGFPGI--N 1490
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPK-GFKGFSGEKEEK 6
G G PG G+ G G G +G G DG PG+ G + + +G + GF G G EK
Sbjct: 1491 GPPGPPGQRGYEGARGPPGAKGQAGEDGRPGVPGRRFVLVKTVKGREDGFPGIEGPLGEK 1550
Score = 64.1 bits (149), Expect = 4e-11
Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = -1
Query: 332 GWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYP 156
G PG P P G +G G G +G++G GPPG+ G+ G KG+ G PG P
Sbjct: 508 GLPGIGPPGPDGDR-GPQGPTGFPGTKGNQGIAGPPGQIGDPGKMGPQGFKGDPGPPGPP 566
Query: 155 GFNGVPGRKGIRGDQGSD---GYPGMGGDIGIQGTSQQGPKGFKGFSGEK 15
G GVPG G++G G G G G+ G +G S QG G G G +
Sbjct: 567 GEVGVPGAPGMKGPIGKPGPVGDAGAPGEKGARGLSIQGTPGMDGKRGPR 616
Score = 63.3 bits (147), Expect = 7e-11
Identities = 37/87 (42%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G G G +G G GP GE G + G G G PG PG GV G +G++GD G
Sbjct: 805 GTDGLPGAPGRDGIDGVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPGVTGEQGVKGDTG 864
Query: 107 SDGYPGMGGDIGIQGT-SQQGPKGFKG 30
G PG G G GT QG KG G
Sbjct: 865 PSGEPGPAGPPGPLGTPGTQGAKGEPG 891
Score = 62.9 bits (146), Expect = 9e-11
Identities = 47/125 (37%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
P PP G PG PG G G GL G G+ G+ GP G G + DG
Sbjct: 671 PKPPPGPAGEPGSPGLPGED---------GAIGSRGLPGPSGEPGKPGPAGRAGLAGQDG 721
Query: 194 I-YAKGEKGYPGYPGFNG----VPGRKGIRGDQ---GSDGYPGMGGDIGIQGTSQQGPKG 39
+ G KG PG G G + G KG +G Q G+ G PG+ GD+G G +QGP G
Sbjct: 722 LPGTPGTKGEPGPTGEKGEVFRIKGEKGAKGQQGGIGNPGPPGLRGDVGPPG--EQGPTG 779
Query: 38 FKGFS 24
G S
Sbjct: 780 VPGES 784
Score = 62.9 bits (146), Expect = 9e-11
Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI-YAKGEKGYP 165
G PG G + G G G G G+KG+ G PG+ G + G+ A+G KG P
Sbjct: 1106 GDPGPAGPRGPAGRNGIDGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGLKGEP 1165
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G G NG PGRKG G G +G G+ G G G + G +G KG G
Sbjct: 1166 GRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPA--GVQGVKGDPG 1211
Score = 60.9 bits (141), Expect = 4e-10
Identities = 42/108 (38%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG PG A GE G G+ G +G+KG G PG G G KG++G PG
Sbjct: 1313 GPPGLPGRAGQ---AGPKGETGLPGMPGLDGEKGSAGVPGIPGGP--GGRGFKGDQGPPG 1367
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G PG G G +G G G+ G G G + GP G KG G
Sbjct: 1368 LNGNPGAPGVDGPTGPKGESGIAGLDGPKGEPGLPGRDGPAGEKGSPG 1415
Score = 60.5 bits (140), Expect = 5e-10
Identities = 51/137 (37%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Frame = -1
Query: 374 PGPPS----RLVLSD-GVPGWPG-ATPDIPMAF--LFGEKGDMGLTGEEGDKGEIGPPGE 219
PGPP + V D G G PG A P P+ G KG+ G G G +G GPPG
Sbjct: 848 PGPPGVTGEQGVKGDTGPSGEPGPAGPPGPLGTPGTQGAKGEPGPLGTPGRQGLAGPPGR 907
Query: 218 TGESLIDGIYAKGEKGYPGYPGFNG------VPGRKGIRGDQGSDGYPGMGGDIGIQGTS 57
G G +G G PG PG G +PG G RG G G G GD T
Sbjct: 908 DGMKGDPG--PRGRDGLPGEPGARGDIGSRGLPGEDGPRGPPGIQGMKGAKGDAITGPTG 965
Query: 56 QQGPKGFKGFSGEKEEK 6
GP G G G K E+
Sbjct: 966 PPGPPGLPGRPGLKGER 982
Score = 60.1 bits (139), Expect = 7e-10
Identities = 37/89 (41%), Positives = 43/89 (48%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G++G+ G G KG IG PG G++ A GEKG G G PG G RG +G
Sbjct: 564 GPPGEVGVPGAPGMKGPIGKPGPVGDA-----GAPGEKGARGL-SIQGTPGMDGKRGPRG 617
Query: 107 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G G G G G S GP G KG G
Sbjct: 618 PIGEKGPTGFPGPPGDSDYGPPGDKGLKG 646
Score = 59.3 bits (137), Expect = 1e-09
Identities = 43/109 (39%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG PG + P G KG+ G G+EG G IGP G+ E+ G G PG
Sbjct: 626 GFPGPPGDSDYGPPGDK-GLKGNTGPPGDEGVPGPIGPKGDKCEACPKP--PPGPAGEPG 682
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGE 18
PG G G G RG G G PG G G G Q G G G GE
Sbjct: 683 SPGLPGEDGAIGSRGLPGPSGEPGKPGPAGRAGLAGQDGLPGTPGTKGE 731
Score = 59.3 bits (137), Expect = 1e-09
Identities = 43/120 (35%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGW---PGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLI 201
GP R + DG+PG PG+ + A + G++G G G G +G G PG G++
Sbjct: 1115 GPAGRNGI-DGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGLKGEPGRDGQN-- 1171
Query: 200 DGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
+ G KG PG G NG+ G G G G G G+ GD G+ GP G KG G
Sbjct: 1172 ---GSPGRKGEPGPAGKNGINGLDGPPGPDGPAGVQGVKGDPGVGQPGLPGPAGPKGERG 1228
Score = 55.6 bits (128), Expect = 1e-08
Identities = 50/132 (37%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = -1
Query: 377 VPGP---PSRL-VLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGE 210
VPGP P R L GV G PG + G+ G GL G +G G GPPG TG
Sbjct: 254 VPGPKGEPGRAPTLLKGVKGEPGPEGPQGPPGVRGDTGFPGLNGTQGLPGPKGPPGPTGP 313
Query: 209 SLIDGIYAKGEKG--YPGYPGFNGVPGRKGIRGDQ-GSDGYPGMGGDIGIQG-TSQQGPK 42
+G KG G + G G G G KG RG G G G G +G G K
Sbjct: 314 ---EG--PKGNMGISFKGPQGMKGDKGTKGARGPPGGGSGGSGCNGTTIFKGPPGAPGEK 368
Query: 41 GFKGFSGEKEEK 6
G G GEK E+
Sbjct: 369 GEPGKQGEKGEE 380
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 23/117 (19%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA---------------KGEKGYPGYPG 153
G KG+ G G+ G G GPPG G + + G+ KGE+G G+PG
Sbjct: 1175 GRKGEPGPAGKNGINGLDGPPGPDGPAGVQGVKGDPGVGQPGLPGPAGPKGERGVNGFPG 1234
Query: 152 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS--------QQGPKGFKGFSGEKEEK 6
G+ G +G+ G G G PG G G +G+ ++G G +G +G K ++
Sbjct: 1235 IKGIQGVQGLEGPPGPPGPPGQIGFTGAKGSKGDQGELVIERGAPGPRGNTGAKGDR 1291
Score = 54.8 bits (126), Expect = 2e-08
Identities = 44/123 (35%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = -1
Query: 371 GPPSR--LVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
GPP + G G PG + L G G G G+ G G GP G G
Sbjct: 1022 GPPGEDGNIGEKGYAGLPGPRGETGEKGLDGPSGPPGTPGQPGPPGPRGPEGRQGFPGFK 1081
Query: 197 GIYAKGEKGYPGYPGFN---GVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKG 30
G +GEKG G PG + VPG KG G G G G G G+ GT + G G KG
Sbjct: 1082 G--NQGEKGRMGPPGTSEPGNVPGPKGDPGPAGPRGPAGRNGIDGLPGTKGEPGSLGEKG 1139
Query: 29 FSG 21
+G
Sbjct: 1140 DAG 1142
Score = 54.4 bits (125), Expect = 3e-08
Identities = 33/80 (41%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGV---------PG 135
G G G G KG G PGE GE G KGE+G PG PG G+ PG
Sbjct: 345 GGSGGSGCNGTTIFKGPPGAPGEKGEPGKQG--EKGEEGRPGLPGAQGIEGPKGERGEPG 402
Query: 134 RKGIRGDQGSDGYPGMGGDI 75
+G++GD+G DG PG G +
Sbjct: 403 NQGLKGDRGVDGNPGPIGPL 422
Score = 53.6 bits (123), Expect = 6e-08
Identities = 46/133 (34%), Positives = 62/133 (46%), Gaps = 29/133 (21%)
Frame = -1
Query: 347 SDGVPGWPGATPD---IPMAFLFGEKG-DMGLTGEEGDKGEIG------PPGETGESLID 198
SDG PG PG+ + I + GE+G G+ G G+KG+ G PPG G+ +
Sbjct: 1443 SDGFPGIPGSKGERGLIGPKGIKGERGYGKGIPGPRGEKGDSGFPGINGPPGPPGQRGYE 1502
Query: 197 GIY----AKG---EKGYPGYPGF------------NGVPGRKGIRGDQGSDGYPGMGGDI 75
G AKG E G PG PG +G PG +G G++G+ G PG+ G I
Sbjct: 1503 GARGPPGAKGQAGEDGRPGVPGRRFVLVKTVKGREDGFPGIEGPLGEKGATGLPGLTGSI 1562
Query: 74 GIQGTSQQGPKGF 36
G+ G GF
Sbjct: 1563 GVPGPPGYSDFGF 1575
Score = 50.8 bits (116), Expect = 4e-07
Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Frame = -1
Query: 251 GDKGEIGPPGETGES--LIDGIYAK----GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
G G GP GE G + L+ G+ + G +G PG G G PG G +G G G PG
Sbjct: 250 GQDGVPGPKGEPGRAPTLLKGVKGEPGPEGPQGPPGVRGDTGFPGLNGTQGLPGPKGPPG 309
Query: 89 MGGDIGIQGT---SQQGPKGFKGFSGEK 15
G G +G S +GP+G KG G K
Sbjct: 310 PTGPEGPKGNMGISFKGPQGMKGDKGTK 337
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSD 102
GE G G PG G PG +G +G S+
Sbjct: 459 GEPGASGRPGIPGRPGTQGAKGSTVSN 485
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 77.0 bits (181), Expect = 5e-15
Identities = 52/134 (38%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAF------LFGEKGDMGLTGEEGDKGEIGPPGETG 213
PG P R DG PG G + A L G +G G G GD+G GP G G
Sbjct: 9 PGEPGR----DGTPGAIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAG 64
Query: 212 ESLIDG----IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQG 48
E +G + GEKGY G PG G+ G++G GD GS G G GD G+ G G
Sbjct: 65 EDGAEGAAGLVGDSGEKGYRGAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGVDGPPGSPG 124
Query: 47 PKGFKGFSGEKEEK 6
P+GF G G K
Sbjct: 125 PQGFNGARGPNGPK 138
Score = 60.5 bits (140), Expect = 5e-10
Identities = 36/94 (38%), Positives = 43/94 (45%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
DG G G D G G GL G+ G +G+ G PG +GE+ G+ G G P
Sbjct: 66 DGAEGAAGLVGDSGEKGYRGAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGV--DGPPGSP 123
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
G GFNG G G +GD G G G G G G
Sbjct: 124 GPQGFNGARGPNGPKGDSGRPGQDGRQGPPGPPG 157
Score = 56.8 bits (131), Expect = 6e-09
Identities = 37/87 (42%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G+ G G +GE GDKG GPPG G +G A+G G G G G GR+G G G
Sbjct: 100 GDPGSPGGSGEAGDKGVDGPPGSPGPQGFNG--ARGPNGPKGDSGRPGQDGRQGPPGPPG 157
Query: 107 SDGYPGMGGDIGIQGTSQQGP-KGFKG 30
+ G PG + IQ S+ GP KG G
Sbjct: 158 ARGEPGQQAPMMIQ-VSRPGPNKGPPG 183
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYA----KGEKGYPGYPGFNGVPGRKGIRGD 114
+GD G G +G G IGP G G + G +G G G G G G KG G+
Sbjct: 6 QGDPGEPGRDGTPGAIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGE 65
Query: 113 QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 15
G++G G+ GD G +G +G G +G G++
Sbjct: 66 DGAEGAAGLVGDSGEKG--YRGAPGRQGLQGKR 96
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGE 210
DG PG PG G KGD G G++G +G GPPG GE
Sbjct: 117 DGPPGSPGPQGFNGARGPNGPKGDSGRPGQDGRQGPPGPPGARGE 161
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 75.4 bits (177), Expect = 2e-14
Identities = 49/125 (39%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = -1
Query: 374 PGPPSRLVLSD-GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
PGPP + V+ G+PG PG D G KG GL GE G+ G GP G+ G+
Sbjct: 106 PGPPGKPVIRRVGIPGLPGKRGDRGTP---GAKGPPGLAGEPGEPGTQGPRGDPGD---- 158
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
+ GE G G G NG G G+RG G+ G PG G G QG +G G +G G
Sbjct: 159 -VGEPGEAGPSGRNGANGTAGPPGVRGQPGAIGSPGDAGRAGPQGPQGAEGRTGRRGSLG 217
Query: 20 EKEEK 6
E+ K
Sbjct: 218 ERGGK 222
Score = 68.1 bits (159), Expect = 3e-12
Identities = 44/107 (41%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYP 165
G+PG PG + G +GD G GE G G G PG GE G K GEKG+
Sbjct: 394 GMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAPGAQGERGPRGEQGKQGEKGHA 453
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFS 24
G G +G PG G +G G G PG G+ G G+ GP G KG S
Sbjct: 454 GEGGADGAPGIPGEQGPMGPVGAPGPVGNAGSPGS--PGPSGPKGDS 498
Score = 63.7 bits (148), Expect = 5e-11
Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Frame = -1
Query: 308 IPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEKGYPGYPGFNGV 141
IP G G GL G++GD+G G PG G + + G GE+G PG PG +G
Sbjct: 372 IPPQGRAGAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGA 431
Query: 140 P---GRKGIRGDQGSDGYPGMGGDIGIQGT----SQQGPKGFKGFSG 21
P G +G RG+QG G G G+ G G +QGP G G G
Sbjct: 432 PGAQGERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGAPG 478
Score = 58.4 bits (135), Expect = 2e-09
Identities = 32/80 (40%), Positives = 43/80 (53%)
Frame = -1
Query: 254 EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 75
+G G G PG G+ G+ G+ G PG G G PG +G G++G G PG G
Sbjct: 375 QGRAGAPGSPGLGGQKGDQGM--PGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAP 432
Query: 74 GIQGTSQQGPKGFKGFSGEK 15
G QG ++GP+G +G GEK
Sbjct: 433 GAQG--ERGPRGEQGKQGEK 450
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = -1
Query: 245 KGEIGPPGETGESLID--GIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 75
+G IGPPG G+ +I GI G++G G PG G PG G G+ G+ G G GD+
Sbjct: 100 RGLIGPPGPPGKPVIRRVGIPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDV 159
Query: 74 GIQGTSQQGPKGFKGFSG 21
G G + GP G G +G
Sbjct: 160 GEPG--EAGPSGRNGANG 175
Score = 51.2 bits (117), Expect = 3e-07
Identities = 43/124 (34%), Positives = 50/124 (40%)
Frame = -1
Query: 386 ANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGES 207
AN GPP GV G PGA A G +G G G G +G +G G G
Sbjct: 173 ANGTAGPP-------GVRGQPGAIGSPGDAGRAGPQGPQGAEGRTGRRGSLGERGGKGP- 224
Query: 206 LIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGF 27
+G +G G G NGVPG G GD G G G G G +G G G G
Sbjct: 225 -------QGSRGPVGPRGANGVPGSPGADGDTGEAGEHGADGLKGDRGA--DGLPGEDGI 275
Query: 26 SGEK 15
G +
Sbjct: 276 PGPR 279
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 75.4 bits (177), Expect = 2e-14
Identities = 40/91 (43%), Positives = 47/91 (51%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
GE G G G +G KG +G G+ G +DG KG PG PGF G PG+ GIRG +G
Sbjct: 68 GESGPTGALGAKGQKGRMGLKGDAGYDGVDGF-----KGLPGPPGFQGDPGKPGIRGHEG 122
Query: 107 SDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 15
G G G IG G + G G GF G K
Sbjct: 123 LQGVSGKAGSIGDPGPN--GASGMPGFDGTK 151
Score = 62.9 bits (146), Expect = 9e-11
Identities = 38/88 (43%), Positives = 47/88 (53%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 99
G MG G GD+G GPPGE G S G+ KG++G G G G G+ G+ GD+G G
Sbjct: 2 GLMGSRGTPGDRGPRGPPGEQGFS---GV--KGKEGRDGVKGERGSKGKSGLPGDKGPVG 56
Query: 98 YPGMGGDIGIQGTSQQGPKGFKGFSGEK 15
PG G G T + GP G G G+K
Sbjct: 57 PPGHPGHKG--PTGESGPTGALGAKGQK 82
Score = 57.2 bits (132), Expect = 5e-09
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 111
G G GL G G +G+ G PG G + G+ K G G PG G +G+PG G +GD
Sbjct: 95 GVDGFKGLPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGPNGASGMPGFDGTKGDP 154
Query: 110 GSDGYPGMGGDI 75
G +G G+ GDI
Sbjct: 155 GDEGNEGLPGDI 166
Score = 28.7 bits (61), Expect = 1.9
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = -1
Query: 377 VPGPPSRL--VLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESL 204
+PGPP G+ G G A G+ G G +G G G G PG+ G
Sbjct: 102 LPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGPNGASGMPGFDGTKGDPGDEGNEG 161
Query: 203 IDGIYAKGEKGY 168
+ G KG+
Sbjct: 162 LPGDIVPRYKGH 173
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 74.1 bits (174), Expect = 4e-14
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDM------GLTGEEGDKGEIGPPGETGESLIDG---IY 189
G G G T D+ A G+KGD+ G G +G KGE+GPPG ID +
Sbjct: 3626 GSKGDRGETGDVGAAGAKGDKGDVGPVGIRGFKGNKGMKGEVGPPGP--PERIDNQTLLA 3683
Query: 188 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 9
AKG+KG G+PG NG G +G +G +G G G G G T +GP G G +G + E
Sbjct: 3684 AKGDKGERGFPGNNGGKGERGAQGPRGEKGNTGAPGSQG--STGPRGPIGQPGMAGSQGE 3741
Query: 8 K 6
K
Sbjct: 3742 K 3742
Score = 71.7 bits (168), Expect = 2e-13
Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Frame = -1
Query: 374 PGPPSRL----VLS----DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGE 219
PGPP R+ +L+ G G+PG G +G+ G TG G +G GP G
Sbjct: 3670 PGPPERIDNQTLLAAKGDKGERGFPGNNGGKGERGAQGPRGEKGNTGAPGSQGSTGPRGP 3729
Query: 218 TGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 39
G+ + G ++GEKG G PGF G+PG+ G+RG QG +G G G GI G + G KG
Sbjct: 3730 IGQPGMAG--SQGEKGGKGDPGFPGLPGQAGLRGLQGPEGQKGSIGAPGIPG--KIGEKG 3785
Query: 38 FKG 30
G
Sbjct: 3786 VPG 3788
Score = 66.5 bits (155), Expect = 8e-12
Identities = 44/113 (38%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG PG P + + G G G G +G+KGE ES + KG KG PG
Sbjct: 3405 GPPGPPG-----PASTVAGPVGTRGFPGLKGEKGE------PAESTNVNPFTKGVKGEPG 3453
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 6
PGF G+ G G+ G G G PG G GI G GP GF G G E+
Sbjct: 3454 VPGFPGLKGEIGLIGPPGLAGSPGQTGAPGIPGRNGTAGPPGFPGLKGSPGER 3506
Score = 65.7 bits (153), Expect = 1e-11
Identities = 45/114 (39%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAF---LFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKG 171
GVPG+PG +I + L G G G G G G GPPG G G +G G
Sbjct: 3453 GVPGFPGLKGEIGLIGPPGLAGSPGQTGAPGIPGRNGTAGPPGFPGLKGSPG--ERGLSG 3510
Query: 170 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 9
G PG G G +GI G QGS G PG G G GP G G G K E
Sbjct: 3511 IDGPPGDAGPVGPRGINGIQGSQGVPGEPGPAGNGEKGAIGPIGPAGTKGNKGE 3564
Score = 57.2 bits (132), Expect = 5e-09
Identities = 49/139 (35%), Positives = 58/139 (41%), Gaps = 25/139 (17%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGET---------------- 216
S GVPG PG + G G +G G +G+KGE+G GE
Sbjct: 3532 SQGVPGEPGPAGNGEK----GAIGPIGPAGTKGNKGELGSKGEKYNYHYKDTEQERLALK 3587
Query: 215 -----GESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT--- 60
GE+ G+ KGE G PG G G G G GD GS G G GD+G G
Sbjct: 3588 SYQQKGETGTTGV--KGESGTPGLDGSPGKDGPTGSPGDPGSKGDRGETGDVGAAGAKGD 3645
Query: 59 -SQQGPKGFKGFSGEKEEK 6
GP G +GF G K K
Sbjct: 3646 KGDVGPVGIRGFKGNKGMK 3664
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/93 (38%), Positives = 47/93 (50%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G+PG G L G G+ GL+G +G G+ GP G G I+GI +G +G PG
Sbjct: 3483 GIPGRNGTAGPPGFPGLKGSPGERGLSGIDGPPGDAGPVGPRG---INGI--QGSQGVPG 3537
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
PG G G KG G G G G G++G +G
Sbjct: 3538 EPGPAG-NGEKGAIGPIGPAGTKGNKGELGSKG 3569
Score = 51.2 bits (117), Expect = 3e-07
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Frame = -1
Query: 383 NWVPGPPSRLVLSDGVPGWPG--ATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGE 210
N +P S + +G G G P P F+ + + G++GD G +
Sbjct: 3252 NGIPSRASEAITGEGAKGEKGDRGLPG-PAVFIATNSTVVTVKGQKGDAGTCS--SNCSQ 3308
Query: 209 SLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 30
+I + KGE+G G PG G+ G KG G G G G G G G + GP G KG
Sbjct: 3309 QVIRVL--KGEQGPQGPPGLKGIKGDKGFPGMVGFPGLRGKTGLPGKPGKGKPGPTGPKG 3366
Query: 29 FSG 21
G
Sbjct: 3367 EQG 3369
Score = 49.2 bits (112), Expect = 1e-06
Identities = 46/122 (37%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Frame = -1
Query: 341 GVPGWPGAT-PDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA----KGE 177
G PG G+T P P+ G+ G G GE+G KG+ G PG G++ + G+ KG
Sbjct: 3716 GAPGSQGSTGPRGPI----GQPGMAGSQGEKGGKGDPGFPGLPGQAGLRGLQGPEGQKGS 3771
Query: 176 KGYPGYPGF---NGVPGRKG-IRGDQGSDG-YPGMGGDIGIQGTSQQ-----GPKGFKGF 27
G PG PG GVPGR I G G G + G G QG Q GP G +G
Sbjct: 3772 IGAPGIPGKIGEKGVPGRPSTIAGPPGPPGRSKNISGPPGPQGPPGQASQIPGPPGPQGP 3831
Query: 26 SG 21
G
Sbjct: 3832 PG 3833
Score = 45.2 bits (102), Expect = 2e-05
Identities = 39/120 (32%), Positives = 45/120 (37%), Gaps = 7/120 (5%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG G D + G G G TG G G+ G PG TG G G G PG
Sbjct: 3322 GPPGLKGIKGDKGFPGMVGFPGLRGKTGLPGKPGK-GKPGPTGPKGEQGRSISGPPGPPG 3380
Query: 161 YPG-------FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEKA 3
PG NG + +G G PG + G +GF G GEK E A
Sbjct: 3381 APGTSWNDSIVNGGLSNSLLESLRGPPGPPGPASTVA----GPVGTRGFPGLKGEKGEPA 3436
Score = 39.1 bits (87), Expect = 0.001
Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGE-SLIDGI-----YAKG 180
G PG+PG + L G +G G G G G+IG G G S I G +K
Sbjct: 3746 GDPGFPGLPGQAGLRGLQGPEGQKGSIGAPGIPGKIGEKGVPGRPSTIAGPPGPPGRSKN 3805
Query: 179 EKGYPGYPGFNG----VPGRKGIRGDQGSDGYPG 90
G PG G G +PG G +G G G PG
Sbjct: 3806 ISGPPGPQGPPGQASQIPGPPGPQGPPGPPGPPG 3839
Score = 29.9 bits (64), Expect = 0.81
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAKGEKGYPGYPG-------FNGVPGRKGIRGDQGSDGYPGMGGDI 75
G P E+ I G AKGEKG G PG + V KG +GD G+ I
Sbjct: 3253 GIPSRASEA-ITGEGAKGEKGDRGLPGPAVFIATNSTVVTVKGQKGDAGTCSSNCSQQVI 3311
Query: 74 GIQGTSQQGPKGFKGFSGEKEEK 6
+ +QGP+G G G K +K
Sbjct: 3312 RVL-KGEQGPQGPPGLKGIKGDK 3333
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
PGPP R G PG P P G+ + G G +G GPPG G ++D
Sbjct: 3797 PGPPGRSKNISGPPG-PQGPP--------GQASQ--IPGPPGPQGPPGPPGPPGRDVVD 3844
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 72.9 bits (171), Expect = 9e-14
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEK 174
G+ G G + + M GE G G G +G +G G PG G + + G+ + G+
Sbjct: 35 GMSGPKGYSGEKGMQGDRGENGLPGKLGHQGKRGRRGKPGPEGPAGVQGMEGRQGVQGKD 94
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
G G PG NG PGR G+RG +G G G+ G+ G+QG QG +G KG G +
Sbjct: 95 GEEGPPGPNGAPGRPGVRGPKGESGSRGLPGNHGVQGERGSQGGRGIKGGRGNE 148
Score = 67.7 bits (158), Expect = 3e-12
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G G+TG+ G G +G PG+ G + G G G G G PGR+G RGD G
Sbjct: 188 GPYGPQGMTGDRGKPGLVGDPGKKGMA--------GRAGAMGMRGLPGPPGRRGKRGDPG 239
Query: 107 SDGYPGMGGD---IGIQG-TSQQGPKGFKGFSGEKEEK 6
SDG PG GD +G+QG + G G KG G + ++
Sbjct: 240 SDGIPGERGDRGILGVQGEPGKDGSPGLKGTRGTRGKR 277
Score = 64.5 bits (150), Expect = 3e-11
Identities = 42/108 (38%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G G PG I G KG G G G G GP G +GE + G +GE G PG
Sbjct: 2 GESGDPGRLGAIGNPGPMGLKGRRGPRGMRGKAGMSGPKGYSGEKGMQG--DRGENGLPG 59
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G GR+G G +G G GM G G+QG ++GP G G G
Sbjct: 60 KLGHQGKRGRRGKPGPEGPAGVQGMEGRQGVQGKDGEEGPPGPNGAPG 107
Score = 63.3 bits (147), Expect = 7e-11
Identities = 37/93 (39%), Positives = 49/93 (52%)
Frame = -1
Query: 299 AFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIR 120
A + G KG G G +GD+GE G PG+ G G +G+ G G G G+ GR+G++
Sbjct: 34 AGMSGPKGYSGEKGMQGDRGENGLPGKLGHQGKRG--RRGKPGPEGPAGVQGMEGRQGVQ 91
Query: 119 GDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G G +G PG G G G +GPKG G G
Sbjct: 92 GKDGEEGPPGPNGAPGRPGV--RGPKGESGSRG 122
Score = 62.5 bits (145), Expect = 1e-10
Identities = 42/107 (39%), Positives = 57/107 (53%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G G PG P+ P A + G +G G+ G++G++G GP G G + G KGE G G
Sbjct: 68 GRRGKPG--PEGP-AGVQGMEGRQGVQGKDGEEGPPGPNGAPGRPGVRG--PKGESGSRG 122
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
PG +GV G +G +G +G G G G GI G + G KG +G G
Sbjct: 123 LPGNHGVQGERGSQGGRGIKGGRGNEGSAGIPG--RAGNKGGRGDRG 167
Score = 59.3 bits (137), Expect = 1e-09
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = -1
Query: 344 DGVPGWPGATPDIP-MAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGY 168
+G PG P P P + GE G GL G G +GE G G G I G +G +G
Sbjct: 97 EGPPG-PNGAPGRPGVRGPKGESGSRGLPGNHGVQGERGSQGGRG---IKG--GRGNEGS 150
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 15
G PG G G +G RG G G G G +GIQG+ +GP G +G +G++
Sbjct: 151 AGIPGRAGNKGGRGDRGPVGPVGVIGNPGLMGIQGS--EGPYGPQGMTGDR 199
Score = 57.2 bits (132), Expect = 5e-09
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 111
G GD+G++G G GE G G++GE+ G GE+G G PG G PG KG+ G +
Sbjct: 1099 GVAGDIGVSGVRGPTGEQGVQGQSGETGGLGPTGPVGEQGSYGLPGKPGSPGTKGLPGPK 1158
Query: 110 GSDGYPGMGGDIGIQGT----SQQGPKGFKGFSG 21
G G G G +G G + G G +G SG
Sbjct: 1159 GGPGPGGTRGPVGEAGEDGLHGKDGKPGTQGVSG 1192
Score = 56.0 bits (129), Expect = 1e-08
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYP 165
GV G G T + GE+G GL G+ G G G PG G G GE G
Sbjct: 1117 GVQGQSGETGGLGPTGPVGEQGSYGLPGKPGSPGTKGLPGPKGGPGPGGTRGPVGEAGED 1176
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
G G +G PG +G+ G+ G G PG+ G + G
Sbjct: 1177 GLHGKDGKPGTQGVSGNDGPIGSPGLQGKRAMSG 1210
Score = 51.2 bits (117), Expect = 3e-07
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 111
G +G G+ G G++G G PG G G G G G PG G+ G +G G Q
Sbjct: 134 GSQGGRGIKGGRGNEGSAGIPGRAGNKGGRGDRGPVGPVGVIGNPGLMGIQGSEGPYGPQ 193
Query: 110 GSDG---YPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G PG+ GD G +G + G G +G G
Sbjct: 194 GMTGDRGKPGLVGDPGKKGMAGRAGAMGMRGLPG 227
Score = 50.0 bits (114), Expect = 7e-07
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGD---KGEIGPPG---ETGESLIDGIYA 186
S+G G G T D L G+ G G+ G G +G GPPG + G+ DGI
Sbjct: 186 SEGPYGPQGMTGDRGKPGLVGDPGKKGMAGRAGAMGMRGLPGPPGRRGKRGDPGSDGI-- 243
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
GE+G G G G PG+ G G +G+ G G G+ G +G + +G +E +
Sbjct: 244 PGERGDRGILGVQGEPGKDGSPGLKGTRGTRGKRGERGRKGDMCDSEESEEGECDSEESE 303
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = -1
Query: 200 DGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
D + A G +G GYPG N GR+G+ G G DG PG G +G++G GP+G G G
Sbjct: 401 DQMAAMGSRGRTGYPGRN---GRQGMPGADGDDGVPGSAGLMGVRG--PVGPEGLPGAIG 455
Score = 45.6 bits (103), Expect = 2e-05
Identities = 41/121 (33%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGP---PGETGESLIDGIYAKGE 177
S G G+PG M G+ G G G G +G +GP PG G + GI +
Sbjct: 408 SRGRTGYPGRNGRQGMPGADGDDGVPGSAGLMGVRGPVGPEGLPGAIGPVVCMGITSYRT 467
Query: 176 KGYPGYP-------GFNGVP-GRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFS 24
G YP G G P G G G G G PG G G G GP+G +GF+
Sbjct: 468 CGTYEYPVDEWIPCGTYGYPVGASGPTGGMGLIGKPGEMGSSGPAGPQGSAGPRGEQGFT 527
Query: 23 G 21
G
Sbjct: 528 G 528
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 117
G G MGL G+ G+ G GP G G + +GE+G+ G PG +G G+ + G
Sbjct: 492 GPTGGMGLIGKPGEMGSSGPAGPQGSA-----GPRGEQGFTGNPGPDGKNGKNVLVG 543
Score = 39.1 bits (87), Expect = 0.001
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
K + G G G PGR G +G G+DG G+ G G+ G +GP G +G G
Sbjct: 400 KDQMAAMGSRGRTGYPGRNGRQGMPGADGDDGVPGSAGLMGV--RGPVGPEGLPG 452
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = -1
Query: 377 VPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
+PGPP R G G PG+ IP GE+GD G+ G +G+ G+ G PG G
Sbjct: 225 LPGPPGRR----GKRGDPGSD-GIP-----GERGDRGILGVQGEPGKDGSPGLKGTRGTR 274
Query: 197 GIYAKGEKGYPG 162
G +GE+G G
Sbjct: 275 G--KRGERGRKG 284
Score = 36.7 bits (81), Expect = 0.007
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -1
Query: 245 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG---IRGDQGSDGYPGMGGDI 75
K ++ G G + G G +G PG G +GVPG G +RG G +G PG G +
Sbjct: 400 KDQMAAMGSRGRTGYPG--RNGRQGMPGADGDDGVPGSAGLMGVRGPVGPEGLPGAIGPV 457
Query: 74 GIQG 63
G
Sbjct: 458 VCMG 461
Score = 34.3 bits (75), Expect = 0.038
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -1
Query: 293 LFGEKGDMGLTGEEGDKGEIGPPGETGE 210
L G +GD+G G+ G +GE GP G++G+
Sbjct: 665 LRGPQGDIGANGDRGKRGERGPNGQSGK 692
Score = 31.9 bits (69), Expect = 0.20
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESL 204
G GD G GE G G+ G PG GE +
Sbjct: 673 GANGDRGKRGERGPNGQSGKPGAKGEMI 700
Score = 30.7 bits (66), Expect = 0.46
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
G +G G GE+G G GP G+ G++++ G+
Sbjct: 513 GPQGSAGPRGEQGFTGNPGPDGKNGKNVLVGL 544
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGE 177
G +G G G GD+G+ G G G+S G AKGE
Sbjct: 664 GLRGPQGDIGANGDRGKRGERGPNGQSGKPG--AKGE 698
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 72.9 bits (171), Expect = 9e-14
Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Frame = -1
Query: 371 GPPSRLVLS--DGVPGWPGAT-PDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLI 201
GPP S DG+ G PG P+ P G KGD G G G G +GP G G+
Sbjct: 32 GPPGERGFSGKDGLNGTPGKDGPEGPQ----GPKGDSGSPGAVGSPGPMGPEGPKGD--- 84
Query: 200 DGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
KG+KG G PG +G PG +G +G+ G G G GD G QG Q GP+G +G +G
Sbjct: 85 -----KGDKGDTGAPGIDGQPGPQGEKGETGPQGEQGPKGDTGPQG--QPGPEGPQGPAG 137
Score = 63.3 bits (147), Expect = 7e-11
Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G+ G G G +GD+G+IGP G GE+G+ G G NG PG+ G G QG
Sbjct: 11 GDNGRDGPIGPKGDQGDIGPQG-----------PPGERGFSGKDGLNGTPGKDGPEGPQG 59
Query: 107 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSGE 18
G G G +G G +GPKG KG G+
Sbjct: 60 PKGDSGSPGAVGSPGPMGPEGPKGDKGDKGD 90
Score = 63.3 bits (147), Expect = 7e-11
Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-------------KGEKGYP---GYP 156
G G +G G++GD G GPPGE G S DG+ KG+ G P G P
Sbjct: 14 GRDGPIGPKGDQGDIGPQGPPGERGFSGKDGLNGTPGKDGPEGPQGPKGDSGSPGAVGSP 73
Query: 155 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGE 18
G G G KG +GD+G G PG+ G G QG + GP+G +G G+
Sbjct: 74 GPMGPEGPKGDKGDKGDTGAPGIDGQPGPQGEKGETGPQGEQGPKGD 120
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 72.9 bits (171), Expect = 9e-14
Identities = 46/108 (42%), Positives = 54/108 (50%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG PG+ A G GD G+ G EG+KGE G PG LI GE+G G
Sbjct: 258 GKPGKPGSRGQAGPAGKRGMIGDRGVRGAEGNKGESGAPG-----LIGAEGPVGEEGGRG 312
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 18
PG G G +G+ G G DG PG G G +G S GP GF G G+
Sbjct: 313 RPGKPGADGPEGLPGPAGDDGRPGENGAPGSRGNS--GPAGFPGAKGK 358
Score = 57.2 bits (132), Expect = 5e-09
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLF-GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
G G GAT MAF+F G G G GE GDKG+ G PG+ G +G
Sbjct: 223 GEAGPTGAT--FIMAFVFQGNVGKSGSKGESGDKGQPGKPGK-----------PGSRGQA 269
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G G+ G +G+RG +G+ G G G IG +G ++G +G G G
Sbjct: 270 GPAGKRGMIGDRGVRGAEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPG 318
Score = 56.4 bits (130), Expect = 8e-09
Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 111
G++G +G+TG G G +G G +G G G G PG G G PGR G G
Sbjct: 19 GQQGPIGMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQPGPRGIKGPPGRAGGTGLM 78
Query: 110 GSDGYPGMGGDIGIQGTS-QQGPKGFKGFSGEK 15
G G PG+ G G +G+S + G G G SG K
Sbjct: 79 GYLGEPGVVGGAGPKGSSGRPGDVGQAGASGPK 111
Score = 51.2 bits (117), Expect = 3e-07
Identities = 35/86 (40%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGET--GESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDG 99
G G G +GE GP G T + G K G KG G G G PG+ G RG G G
Sbjct: 214 GDLGAAGPQGEAGPTGATFIMAFVFQGNVGKSGSKGESGDKGQPGKPGKPGSRGQAGPAG 273
Query: 98 YPGMGGDIGIQGTSQQGPKGFKGFSG 21
GM GD G++G +G KG G G
Sbjct: 274 KRGMIGDRGVRGA--EGNKGESGAPG 297
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS----QQGPKGFKGFSGE 18
G+ G PG G +G G +G +G G G PG+ G +G G S QGP G G G+
Sbjct: 1 GQVGLPGLNGIDGPEGERGQQGPIGMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQ 59
Score = 42.7 bits (96), Expect = 1e-04
Identities = 33/94 (35%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEK 174
G G G T +A G G G G +G G G PG+ G I G + G
Sbjct: 19 GQQGPIGMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQPGPRGIKGPPGRAGGTGLM 78
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
GY G PG G G KG G G G G G G
Sbjct: 79 GYLGEPGVVGGAGPKGSSGRPGDVGQAGASGPKG 112
Score = 39.5 bits (88), Expect = 0.001
Identities = 35/108 (32%), Positives = 44/108 (40%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGY 168
++G G GA I GE+G G G+ G G G PG G+
Sbjct: 286 AEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPGADGPEGLPGPAGDD------------- 332
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFS 24
G PG NG PG RG+ G G+PG G + T +G F G S
Sbjct: 333 -GRPGENGAPGS---RGNSGPAGFPGAKGK--VVSTCSRGSSIFNGGS 374
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 71.7 bits (168), Expect = 2e-13
Identities = 46/109 (42%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = -1
Query: 374 PGPPSRLVLS--DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLI 201
PGPP + DG+PG PGA GE G G+ G +G G G G+ GE+
Sbjct: 937 PGPPGPFGAAGLDGMPGKPGAK---------GESGQPGMRGADGLSGPPGFDGQAGETGA 987
Query: 200 DGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ 54
G KGE G PG PGF G+ G G G GS G PG G IGI+ Q
Sbjct: 988 IGF--KGEPGTPGIPGFPGLTGSSGRDGLDGSPGRPGPSGRIGIRDKQQ 1034
Score = 69.3 bits (162), Expect = 1e-12
Identities = 51/125 (40%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = -1
Query: 386 ANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLT--GEEGDKGEIGPPGETG 213
AN +PGPP L S G P P P P + G+KG G G G GE GPPG G
Sbjct: 889 ANGLPGPPG-LAGSPG-PRGPNGEPGDPG--MDGDKGPPGPVDAGPRGPPGEPGPPGPFG 944
Query: 212 ESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGF 36
+ +DG+ K G KG G PG G G+ G G DG G G IG +G + G G
Sbjct: 945 AAGLDGMPGKPGAKGESGQPGMRGA---DGLSGPPGFDGQAGETGAIGFKG--EPGTPGI 999
Query: 35 KGFSG 21
GF G
Sbjct: 1000 PGFPG 1004
Score = 65.3 bits (152), Expect = 2e-11
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
PGPP + G+PG G + D G G+ GL G++GDKG +GP G G +
Sbjct: 511 PGPPGENG-AFGLPGRKGDSGDR------GPDGNPGLPGQKGDKGLLGPIGPPGRGGVGS 563
Query: 194 IYAKGEKGYPGYPG--FNGVPGRKGI--------RGDQGSDGYPGMGGDIGIQG-TSQQG 48
+G+KG+ G PG G PG G+ RG+ G G PG+ G G G G
Sbjct: 564 QGFQGQKGFKGDPGDAIPGNPGDPGVMGFPGEPQRGEPGDPGRPGLPGQTGADGPPGMIG 623
Query: 47 PKGFKGFSGEKEE 9
P+G G +G + E
Sbjct: 624 PRGPDGNNGPQGE 636
Score = 63.3 bits (147), Expect = 7e-11
Identities = 44/119 (36%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Frame = -1
Query: 344 DGVPGWPG--ATPDIP-MAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEK 174
+G PG PG T +P G G +G G GD G++GPPG G G
Sbjct: 38 EGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPL 97
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQ------GPKGFKGFSGEK 15
G G PG G PG GI G G+ G G G +G +G GPKG G GEK
Sbjct: 98 GEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPGEK 156
Score = 61.7 bits (143), Expect = 2e-10
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G G PG + + GE G G G +G G G PG G S I+G+ KG+ G G
Sbjct: 283 GAKGQPGLDRE-EVVMPPGESGAAGDLGPDGPPGPKGAPGAPGFSGIEGL--KGQSGPLG 339
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGD----IGIQGTSQQGPKGFKGFSGE 18
PG NG+ G G G G G PG GD + + ++G G GF GE
Sbjct: 340 DPGDNGIDGISGYPGVPGRKGDPGQKGDPPRFVPVPDHGEKGQSGEPGFPGE 391
Score = 60.9 bits (141), Expect = 4e-10
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYP 93
G G +G +GE GP G GE DG+ G G G G +G PG+KG G +G G P
Sbjct: 223 GPPGPKGKRGETGPRGRPGEPGADGVRGPDGSTGERGETGLDGAPGKKGEDGTKGEQGVP 282
Query: 92 GMGGDIGIQGTSQQGPKGFKGFSGE 18
G G G+ P G G +G+
Sbjct: 283 GAKGQPGLDREEVVMPPGESGAAGD 307
Score = 60.5 bits (140), Expect = 5e-10
Identities = 37/87 (42%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYP 93
G+TGE+GD GPPG G G +G G PG G GVPG KG +G G+ G+P
Sbjct: 12 GVTGEQGD---AGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFP 68
Query: 92 GMGGDIGIQGTSQQGPKGFKGFSGEKE 12
G GD T GP G KG G ++
Sbjct: 69 GSRGD-----TGDLGPPGAKGLPGAQQ 90
Score = 60.5 bits (140), Expect = 5e-10
Identities = 38/89 (42%), Positives = 42/89 (47%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G GD G G++G+ G G PG GES G G PG PG G PG RG G
Sbjct: 861 GPPGDNGPRGKKGEAGSDGRPGFPGES--------GANGLPGPPGLAGSPGP---RGPNG 909
Query: 107 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G PGM GD G G GP+G G G
Sbjct: 910 EPGDPGMDGDKGPPGPVDAGPRGPPGEPG 938
Score = 59.7 bits (138), Expect = 9e-10
Identities = 44/125 (35%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPG------ETGE 210
GPP DG+PG PG + G +G G G G G GPPG + GE
Sbjct: 451 GPPG-----DGLPGKPGLIGEQGAIGFKGLRGMTGNPGPNGPAGATGPPGIPGFPGQKGE 505
Query: 209 SLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 30
I GE G G PG G G +G G+ G G G G +G G +G G +G
Sbjct: 506 PGISRPGPPGENGAFGLPGRKGDSGDRGPDGNPGLPGQKGDKGLLGPIGPPGRGGVGSQG 565
Query: 29 FSGEK 15
F G+K
Sbjct: 566 FQGQK 570
Score = 58.8 bits (136), Expect = 2e-09
Identities = 48/125 (38%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
PG P D P P P P GE G G GE G G GP G TGE G
Sbjct: 205 PGRPGPKGPKDTCPRCPPGPPG-PKGKR-GETGPRGRPGEPGADGVRGPDGSTGERGETG 262
Query: 194 I-YAKGEKGYPGYPGFNGVPGRKGIRGDQGSD-----GYPGMGGDIGIQG-TSQQGPKGF 36
+ A G+KG G G GVPG KG G + G G GD+G G +G G
Sbjct: 263 LDGAPGKKGEDGTKGEQGVPGAKGQPGLDREEVVMPPGESGAAGDLGPDGPPGPKGAPGA 322
Query: 35 KGFSG 21
GFSG
Sbjct: 323 PGFSG 327
Score = 58.8 bits (136), Expect = 2e-09
Identities = 44/116 (37%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTG------EEGDKGEIGPPGETGESLIDG---IY 189
G PG PGA GE+G+ GL G E+G KGE G PG G+ +D +
Sbjct: 238 GRPGEPGADGVRGPDGSTGERGETGLDGAPGKKGEDGTKGEQGVPGAKGQPGLDREEVVM 297
Query: 188 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
GE G G G +G PG KG G G G G+ G G G G G G SG
Sbjct: 298 PPGESGAAGDLGPDGPPGPKGAPGAPGFSGIEGLKGQSGPLG--DPGDNGIDGISG 351
Score = 58.4 bits (135), Expect = 2e-09
Identities = 45/129 (34%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLF-GEKGDMGLTGEEGDKGEIGPPGETGESLI- 201
PG P + + G G G P P+ + G KG G G+EG +G G G++G +
Sbjct: 386 PGFPGEIGEA-GTQGEKGNPPPTPIIIKYKGPKGTSGAQGKEGPRGPDGRDGQSGPKGLP 444
Query: 200 --DGIYAKGEKGYPGYPGF---NGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGF 36
DG+ G PG PG G G KG+RG G+ PG G G GP G
Sbjct: 445 GDDGLKGPPGDGLPGKPGLIGEQGAIGFKGLRGMTGN---PGPNGPAG-----ATGPPGI 496
Query: 35 KGFSGEKEE 9
GF G+K E
Sbjct: 497 PGFPGQKGE 505
Score = 55.2 bits (127), Expect = 2e-08
Identities = 42/115 (36%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = -1
Query: 341 GVPGW---PGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKG 171
GVPG PG D P + G+ G +GE G GEIG G GE K
Sbjct: 354 GVPGRKGDPGQKGDPPRFVPVPDHGEKGQSGEPGFPGEIGEAGTQGEKGNPPPTPIIIK- 412
Query: 170 YPGYPGFNGVPGRKGIRGDQGSDGY---PGMGGDIGIQGTSQQGPKGFKGFSGEK 15
Y G G +G G++G RG G DG G+ GD G++G G G G GE+
Sbjct: 413 YKGPKGTSGAQGKEGPRGPDGRDGQSGPKGLPGDDGLKGPPGDGLPGKPGLIGEQ 467
Score = 54.0 bits (124), Expect = 4e-08
Identities = 40/110 (36%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKG-----DMGLTGEEGDKGEIGP-----PGETGESLIDG 195
DG PG PG D + G G G G++G KG+ G PG+ G G
Sbjct: 535 DGNPGLPGQKGDKGLLGPIGPPGRGGVGSQGFQGQKGFKGDPGDAIPGNPGDPGVMGFPG 594
Query: 194 IYAKGEKGYPGYPGF------NGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
+GE G PG PG +G PG G RG G++G G GG GI+G
Sbjct: 595 EPQRGEPGDPGRPGLPGQTGADGPPGMIGPRGPDGNNGPQGEGGPNGIKG 644
Score = 52.4 bits (120), Expect = 1e-07
Identities = 45/123 (36%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG G+ P P G G G G++GD G +GP G+ G ID KG G PG
Sbjct: 101 GPPGSQGS-PGAP-----GIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPG 154
Query: 161 ---YPGFNGVPGRKGIRGD----------QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
PG G PG KG + + Q G PG G++G QG GP G G G
Sbjct: 155 EKGLPGVQGDPGIKGPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPI--GPPGRPGPKG 212
Query: 20 EKE 12
K+
Sbjct: 213 PKD 215
Score = 51.2 bits (117), Expect = 3e-07
Identities = 50/140 (35%), Positives = 58/140 (41%), Gaps = 19/140 (13%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGD-----------KGEIGPP 225
GPP S G PG PG I M G+KGD G G +G KG GPP
Sbjct: 101 GPPG----SQGSPGAPGI---IGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPP 153
Query: 224 GETGESLIDGIYA-KGEKGYPGY-------PGFNGVPGRKGIRGDQGSDGYPGMGGDIGI 69
GE G + G KG K P + G PG G GDQG G PG G G
Sbjct: 154 GEKGLPGVQGDPGIKGPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPGPKGP 213
Query: 68 QGTSQQGPKGFKGFSGEKEE 9
+ T + P G G G++ E
Sbjct: 214 KDTCPRCPPGPPGPKGKRGE 233
Score = 49.2 bits (112), Expect = 1e-06
Identities = 42/128 (32%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
PG P + +G+ G G D + G G G+ G +GD G+ G P
Sbjct: 320 PGAPGFSGI-EGLKGQSGPLGDPGDNGIDGISGYPGVPGRKGDPGQKGDPPR-----FVP 373
Query: 194 IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD-------GYPGMGGDIGIQG-TSQQGPKG 39
+ GEKG G PGF G G G +G++G+ Y G G G QG +GP G
Sbjct: 374 VPDHGEKGQSGEPGFPGEIGEAGTQGEKGNPPPTPIIIKYKGPKGTSGAQGKEGPRGPDG 433
Query: 38 FKGFSGEK 15
G SG K
Sbjct: 434 RDGQSGPK 441
Score = 46.8 bits (106), Expect = 7e-06
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEI-GPPGETGESLIDG 195
G R ++ D V G+P + G + G G I GPPG G+ I
Sbjct: 1357 GREERQIVVDKVKGFPVVEKHYSHSGTGAVSGLGPMVDHGGPPGTISGPPGIRGDPGIPS 1416
Query: 194 IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
+ +G PG PG +G G++G+ GD G G PG G G
Sbjct: 1417 VV----RGPPGKPGLSGNKGKEGLPGDDGVPGQPGPPGPPG 1453
Score = 35.9 bits (79), Expect = 0.012
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESL 204
PG PS + G PG PG L G KG GL G++G G+ GPPG G+ +
Sbjct: 1412 PGIPS---VVRGPPGKPG---------LSGNKGKEGLPGDDGVPGQPGPPGPPGDGI 1456
Score = 34.7 bits (76), Expect = 0.029
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEI-GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 114
G G+ G+ G + GPPG+ G + G KG++G PG G G PG G GD
Sbjct: 1404 GPPGIRGDPGIPSVVRGPPGKPG---LSG--NKGKEGLPGDDGVPGQPGPPGPPGD 1454
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPG 222
PG P R G+PG GA M G G+ G GE G G G PG
Sbjct: 601 PGDPGR----PGLPGQTGADGPPGMIGPRGPDGNNGPQGEGGPNGIKGKPG 647
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 71.7 bits (168), Expect = 2e-13
Identities = 46/116 (39%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEK 174
G G PGA + G G G TG+ GD+G G G GE G K G +
Sbjct: 468 GTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQ 527
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEKEE 9
G PG G G PG KG RG++G G PG+ G G G+ GP G +G +GEK E
Sbjct: 528 GMPGASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGE 583
Score = 68.1 bits (159), Expect = 3e-12
Identities = 42/108 (38%), Positives = 57/108 (52%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
DG PG PG+ G +G +GLTG+ G +G GPPG +G +G P
Sbjct: 137 DGAPGAPGSP---------GAEGKVGLTGQTGPRGPTGPPG-----------LQGVRGAP 176
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G G G+PG G++G +G+ G G G+ G QG S GP+G KG +G
Sbjct: 177 GNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPS--GPQGSKGQAG 222
Score = 66.5 bits (155), Expect = 8e-12
Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKG 171
SDG+ G PG G+ G G G+ GD+G GP G G GI AKG G
Sbjct: 565 SDGLNGPPGPQGPAGEKGEAGQPGTNGFNGKNGDQGASGPTGPVGPRGPGGIKGAKGVMG 624
Query: 170 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G PG G G++G G +G +G PG G G+ G + GP G G G
Sbjct: 625 SSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGRPGPPGPPGPPG 675
Score = 66.1 bits (154), Expect = 1e-11
Identities = 44/108 (40%), Positives = 58/108 (53%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG+ GA P P + G +G +GLTG+ G +G GPPG G + G A G +G G
Sbjct: 132 GRPGFDGA-PGAPGSP--GAEGKVGLTGQTGPRGPTGPPGLQG---VRG--APGNEGARG 183
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 18
PG G+ G++G G +GS G G G G QG+ +G G G GE
Sbjct: 184 LPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGS--KGQAGIDGRPGE 229
Score = 65.7 bits (153), Expect = 1e-11
Identities = 45/118 (38%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGY 168
+DG PG PGA G +G G +G G G G GE G GI G+ G
Sbjct: 505 ADGTPGEPGAQGTKRKPGTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPGI--DGKDGA 562
Query: 167 PGYPGFNGVP------GRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
PG G NG P G KG G G++G+ G GD G G T GP+G G G K
Sbjct: 563 PGSDGLNGPPGPQGPAGEKGEAGQPGTNGFNGKNGDQGASGPTGPVGPRGPGGIKGAK 620
Score = 62.9 bits (146), Expect = 9e-11
Identities = 36/94 (38%), Positives = 47/94 (50%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G G+ G G G G PGE G G +G G G PG G G G RG++G
Sbjct: 411 GLAGSRGMPGVAGKNGNAGEPGERGPVGPQG--PQGAPGTQGPPGLPGKTGESGPRGERG 468
Query: 107 SDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
+DG PG G+ G QG + GP G G +G+ ++
Sbjct: 469 TDGKPGAMGERGPQG--ETGPTGLTGPTGKPGDR 500
Score = 60.5 bits (140), Expect = 5e-10
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGY 168
S+G PG P +P +P G G G G +GE+G PGE+G + G G
Sbjct: 88 SNGAPG-PRGSPGLP--------GPRGSDGPRGQRGEVGLPGESGSA--------GMVGR 130
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
PG PGF+G PG G G +G G G G G G QG +G G G +
Sbjct: 131 PGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGAR 182
Score = 60.5 bits (140), Expect = 5e-10
Identities = 44/121 (36%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
P P + G PG PG T GE G G G +G G +G G GE+ G
Sbjct: 439 PQGPQGAPGTQGPPGLPGKT---------GESGPRGERGTDGKPGAMGERGPQGETGPTG 489
Query: 194 IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS-QQGPKGFKGFSGE 18
+ G G PG G NG G G G QG+ PG G G+ G S ++G G KG GE
Sbjct: 490 L--TGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMPGASGRRGAPGAKGSRGE 547
Query: 17 K 15
+
Sbjct: 548 R 548
Score = 59.7 bits (138), Expect = 9e-10
Identities = 37/99 (37%), Positives = 46/99 (46%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
PGPP G G G+ + G G+ G+ G +G GE GP GE G G
Sbjct: 668 PGPPG----PPGPSGPSGSNGRNGVKGTPGRDGEPGIPGPDGRPGERGPGGEIGRKGEKG 723
Query: 194 IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 78
GE+GYPG G G PG G+RG G G G+ G+
Sbjct: 724 --PSGERGYPGKDGRAGEPGAVGLRGPTGQPGENGLPGE 760
Score = 59.3 bits (137), Expect = 1e-09
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = -1
Query: 338 VPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGY 159
+ G PG + G KG+ G GE G G+ GPPG +G +G G +G G
Sbjct: 784 IQGKPGINGTNGRGGIPGLKGERGSPGEPGKAGKQGPPGPSGPLGANG--EPGVQGAKGA 841
Query: 158 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G +G G++G G QG +G G G+ G +G +QGP G G G
Sbjct: 842 RGDDGKDGKQGPAGPQGPNGPQGDKGNRGPRGEKGEQGPPGVAGTDG 888
Score = 58.0 bits (134), Expect = 3e-09
Identities = 44/108 (40%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG PG P P G G G +G G G G PG GE GI G G PG
Sbjct: 660 GPPGRPGP-PGPP-----GPPGPSGPSGSNGRNGVKGTPGRDGEP---GI--PGPDGRPG 708
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G GRKG +G G GYPG G G G +GP G G +G
Sbjct: 709 ERGPGGEIGRKGEKGPSGERGYPGKDGRAGEPGAVGLRGPTGQPGENG 756
Score = 57.2 bits (132), Expect = 5e-09
Identities = 35/90 (38%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 111
G +G GL G G KG+ G G G G G +G G G +G PG G+ GD+
Sbjct: 177 GNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDK 236
Query: 110 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G+ G PG G GI+G S G G G G
Sbjct: 237 GAMGGPGPAGQPGIRGPS--GAPGITGNPG 264
Score = 55.6 bits (128), Expect = 1e-08
Identities = 41/106 (38%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = -1
Query: 374 PGPPSRLVLSD--GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLI 201
PGP L + GV G GA D G G G G +GDKG GP GE
Sbjct: 821 PGPSGPLGANGEPGVQGAKGARGDDGKDGKQGPAGPQGPNGPQGDKGNRGPRGE------ 874
Query: 200 DGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
KGE+G PG G +G PG +G G G G PG+ G G G
Sbjct: 875 -----KGEQGPPGVAGTDGPPGPRGNVGPMGPMGDPGLPGPPGPPG 915
Score = 54.8 bits (126), Expect = 2e-08
Identities = 44/129 (34%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Frame = -1
Query: 386 ANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGES 207
A +PG P L G G G+ + G +G G G +G GE G PG+ G
Sbjct: 181 ARGLPGNPG-LKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAM 239
Query: 206 LIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPK 42
G + G +G G PG G PG GI GD+G +G PG G G G + GP
Sbjct: 240 GGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGPNGSPGPRGAPGPPGKRGKIGRVGPM 299
Query: 41 GFKGFSGEK 15
G G G +
Sbjct: 300 GPIGDPGSR 308
Score = 53.2 bits (122), Expect = 8e-08
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = -1
Query: 254 EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 75
+G +G GPPG+ G+ GE G PG G+NG PG +G+RGD G G G G
Sbjct: 9 KGQRGPDGPPGDIGDQ-----GPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPP 63
Query: 74 GIQGTSQQGPKG 39
G + G KG
Sbjct: 64 GGSTQTAGGIKG 75
Score = 51.2 bits (117), Expect = 3e-07
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDG-IYAKGEKGYPG---YPGFNGVPGR---K 129
G +G G+ G +G G G PG TG G + +KG +G PG PG +G PGR
Sbjct: 609 GPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGRPGPP 668
Query: 128 GIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEKEEK 6
G G G G G G G++GT + G G G G E+
Sbjct: 669 GPPGPPGPSGPSGSNGRNGVKGTPGRDGEPGIPGPDGRPGER 710
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = -1
Query: 245 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 66
+G+ G G G I G+ KGE+G PG PG G G G G G++G PG+ G G +
Sbjct: 785 QGKPGINGTNGRGGIPGL--KGERGSPGEPGKAGKQGPPGPSGPLGANGEPGVQGAKGAR 842
Query: 65 G----TSQQGPKGFKGFSGEKEEK 6
G +QGP G +G +G + +K
Sbjct: 843 GDDGKDGKQGPAGPQGPNGPQGDK 866
Score = 47.2 bits (107), Expect = 5e-06
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
G G +G G+IG G +GE+ G GY G PG G+ G G +GDQG G PG
Sbjct: 10 GQRGPDGPPGDIGDQGPSGEA-----GKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPPG 64
Query: 89 MGGDI--GIQGTSQQG-PKGFKGFSG 21
GI+G G KG +G
Sbjct: 65 GSTQTAGGIKGPDPNDLAAGIKGSNG 90
Score = 47.2 bits (107), Expect = 5e-06
Identities = 43/135 (31%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGES----- 207
GPP + D P P P+ + G+ G+ G+ G+ G +G+ GP G G S
Sbjct: 16 GPPGDI--GDQGPSGEAGKPG-PLGYN-GQPGNQGMRGDPGPQGDQGPQGPPGGSTQTAG 71
Query: 206 ---------LIDGIY----AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 66
L GI A G +G PG PG G G +G RG+ G G G G +G
Sbjct: 72 GIKGPDPNDLAAGIKGSNGAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAGMVG-- 129
Query: 65 GTSQQGPKGFKGFSG 21
+ G GF G G
Sbjct: 130 ---RPGRPGFDGAPG 141
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 304 GISGVAPGHPGTPSERTSLEGGPG 375
GI G PG PG P ++ ++ GGPG
Sbjct: 222 GIDG-RPGEPGLPGDKGAM-GGPG 243
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 69.7 bits (163), Expect = 8e-13
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGY 168
+GVPG PG+ G+ G G TG G +G GP G G + G +G G
Sbjct: 288 NGVPGRPGSK---------GKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGK 338
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
G G NG PGR G RG G G+ G+ G G++G T +GP+G +GF+G++
Sbjct: 339 NGAKGRNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRGPQGPRGFTGKQ 390
Score = 65.3 bits (152), Expect = 2e-11
Identities = 46/129 (35%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Frame = -1
Query: 383 NWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESL 204
N VPG P S G G GAT + L G +G+ GL G +G +G G PG+ G
Sbjct: 288 NGVPGRPG----SKGKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAKG 343
Query: 203 IDGIYAK-------GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQG 48
+G + G +G+ G G GV G G+RG QG G+ G G G+ G T + G
Sbjct: 344 RNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRGPQGPRGFTGKQGLRGVPGRTGKTG 403
Query: 47 PKGFKGFSG 21
G G G
Sbjct: 404 ANGKPGLRG 412
Score = 64.1 bits (149), Expect = 4e-11
Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA----KGEK 174
G GW GA + L G KG +G G +G +G +GP G G G KG +
Sbjct: 118 GPRGWTGARGPKGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLKGSR 177
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSG 21
G G G G G +G+RG +G G PG+ G G++G GP+G+ G +G
Sbjct: 178 GLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRTG 229
Score = 63.7 bits (148), Expect = 5e-11
Identities = 41/108 (37%), Positives = 53/108 (49%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
+G PG GA L G KG G G++G +G G PG G + G G KG
Sbjct: 246 NGRPGAKGAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNG---VPG--RPGSKGKT 300
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G G G G +G+RG QG+ G G+ G G+QG + G G KG +G
Sbjct: 301 GARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQG--RPGKNGAKGRNG 346
Score = 62.5 bits (145), Expect = 1e-10
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQ 111
G+ G G G G +G G PG TG + G A G +GY G G GVPG+ G G
Sbjct: 184 GKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTP 243
Query: 110 GSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
G +G PG G +G +G G KG +G G++
Sbjct: 244 GKNGRPGAKGAMGPRGYRGLTGSKGARGARGKQ 276
Score = 61.3 bits (142), Expect = 3e-10
Identities = 43/112 (38%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGE---TGESLIDGIYAK-GEK 174
G G+ G T + G G G G G KG +GP G TG G K G +
Sbjct: 220 GPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGAKGAMGPRGYRGLTGSKGARGARGKQGLR 279
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G PG NGVPGR G +G G+ G G G G++G QG +G KG G
Sbjct: 280 GATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRG 331
Score = 60.9 bits (141), Expect = 4e-10
Identities = 40/110 (36%), Positives = 54/110 (49%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
+G PG GA I G KG G+ G G +G GP G TG+ +G +G P
Sbjct: 345 NGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRGPQGPRGFTGK--------QGLRGVP 396
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 15
G G G G+ G+RG QG G G G G +G +G KG +G++G +
Sbjct: 397 GRTGKTGANGKPGLRGPQGLKGLKGKTGATGPRGL--RGLKGSRGWTGPR 444
Score = 53.2 bits (122), Expect = 8e-08
Identities = 34/95 (35%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYP 165
G+ G G T L G KG G TG G G GP G G G +G+ G
Sbjct: 415 GLKGLKGKTGATGPRGLRGLKGSRGWTGPRGKTGATGPQGLRGYRGYTGARGLQGKTGKT 474
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT 60
G G G G +G+RG +G G G+ G G +GT
Sbjct: 475 GQKGAKGARGTQGVRGPRGYRGPQGLRGPQGAKGT 509
Score = 46.0 bits (104), Expect = 1e-05
Identities = 27/67 (40%), Positives = 35/67 (52%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G GL G G G G G+TG++ G AKG +G G G G G +G+RG QG
Sbjct: 448 GATGPQGLRGYRGYTGARGLQGKTGKTGQKG--AKGARGTQGVRGPRGYRGPQGLRGPQG 505
Query: 107 SDGYPGM 87
+ G G+
Sbjct: 506 AKGTQGV 512
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 68.9 bits (161), Expect = 1e-12
Identities = 47/119 (39%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGE---IGPPGETGESLIDGIYA-KGEK 174
G+ G G D + G KGD G+TG EG KG+ GP G G++ I G KG+
Sbjct: 336 GITGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGITGPQGPKGDTGITGPQGPKGDT 395
Query: 173 GY---PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
G G G G+ G +G +GD G G G GD GI T QGPKG G +G + K
Sbjct: 396 GITGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGI--TGPQGPKGDTGITGPQGPK 452
Score = 67.3 bits (157), Expect = 4e-12
Identities = 50/126 (39%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Frame = -1
Query: 356 LVLSD--GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGE---IGPPGETGESLIDGI 192
LVLS G G G D + G KGD G+TG EG KG+ GP G G++ I G
Sbjct: 317 LVLSGLKGDTGQQGPKGDTGITGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGITG- 375
Query: 191 YAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFS 24
+G KG G G G G GI G QG G G+ G G +G T +GPKG G +
Sbjct: 376 -PQGPKGDTGITGPQGPKGDTGITGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGIT 434
Query: 23 GEKEEK 6
G + K
Sbjct: 435 GPQGPK 440
Score = 57.2 bits (132), Expect = 5e-09
Identities = 39/103 (37%), Positives = 46/103 (44%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G+ G G D + G KGD G+TG +G KG+ G G G KG+ G G
Sbjct: 408 GITGPEGPKGDTGITGPEGPKGDTGITGPQGPKGDTGITGPQG--------PKGDTGITG 459
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFK 33
G G G KG +G QG GY G G G GTS FK
Sbjct: 460 PQGPKGDTGNKGDQGVQGLRGYNGTQGAKGEAGTSNLNACEFK 502
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 67.7 bits (158), Expect = 3e-12
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKG 171
S G PG G+ + G GD G G+ G +G G PG G + G + G+ G
Sbjct: 265 STGAPGAAGSDGSVGKQGRKGITGDRGAQGKTGKQGPTGTPGTVGLRGVTGPDGSNGQPG 324
Query: 170 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGE 18
G PG G+PG G +GD G +G G GD G+ G +G +G +G SG+
Sbjct: 325 RQGEPGKQGLPGESGAQGDSGDEGDGGAKGDKGVFGGVGLDGAEGEQGARGKSGD 379
Score = 62.1 bits (144), Expect = 2e-10
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGY 168
+G G G + + GE G G+ G G KG +G PG G G+ G G
Sbjct: 96 NGASGPAGVAGERGLPGGLGETGQQGMLGPAGAKGGLGEPGTDGPPGDAGMQGSDGANGQ 155
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
PG PG +GVPG G G G G G GD G +G ++G G +G G
Sbjct: 156 PGLPGRDGVPGTVGESGPPGPAGPIGAVGDSGPRG--ERGELGIRGNKG 202
Score = 60.5 bits (140), Expect = 5e-10
Identities = 42/107 (39%), Positives = 49/107 (45%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G G PG+T A G G G G GD+G G G+ G + G G +G G
Sbjct: 258 GNAGLPGSTGAPGAAGSDGSVGKQGRKGITGDRGAQGKTGKQGPTGTPG--TVGLRGVTG 315
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G NG PGR+G G QG G G GD G +G G KG KG G
Sbjct: 316 PDGSNGQPGRQGEPGKQGLPGESGAQGDSGDEGDG--GAKGDKGVFG 360
Score = 59.7 bits (138), Expect = 9e-10
Identities = 37/92 (40%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = -1
Query: 293 LFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 114
+F KGD G G +G G+ G G+ G A G+ G G PG G PG G G
Sbjct: 226 VFDFKGDSGDGGSDGKAGKEGKAGDRG--------AIGKTGNAGLPGSTGAPGAAGSDGS 277
Query: 113 QGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G G+ GD G QG T +QGP G G G
Sbjct: 278 VGKQGRKGITGDRGAQGKTGKQGPTGTPGTVG 309
Score = 59.3 bits (137), Expect = 1e-09
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G+ G G G++G GE G G++G+ G AKG+KG G G +G G +G RG G
Sbjct: 321 GQPGRQGEPGKQGLPGESGAQGDSGDEGDGG--AKGDKGVFGGVGLDGAEGEQGARGKSG 378
Query: 107 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
G G G +G G QGP G +G G +
Sbjct: 379 DFGPIGPPGPLGPPGDRGMQGPVGLRGTVGAR 410
Score = 52.8 bits (121), Expect = 1e-07
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Frame = -1
Query: 365 PSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA 186
P+ + G+PG G T M G KG +G G +G G+ G G G + G+
Sbjct: 101 PAGVAGERGLPGGLGETGQQGMLGPAGAKGGLGEPGTDGPPGDAGMQGSDGANGQPGLPG 160
Query: 185 K-------GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
+ GE G PG G G G G RG++G G G G +G++G
Sbjct: 161 RDGVPGTVGESGPPGPAGPIGAVGDSGPRGERGELGIRGNKGPVGVEG 208
Score = 41.5 bits (93), Expect = 2e-04
Identities = 37/111 (33%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG G D M G G GL G +G G +G G G + G G G
Sbjct: 133 GEPGTDGPPGDAGMQGSDGANGQPGLPGRDGVPGTVGESGPPGPA--------GPIGAVG 184
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG---FKGFSGE 18
G G G GIRG++G G G I I +Q FKG SG+
Sbjct: 185 DSGPRGERGELGIRGNKGPVGVEGPRFSIRIVLHAQYSSVAVFDFKGDSGD 235
Score = 35.9 bits (79), Expect = 0.012
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 293 LFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRK 129
L G +G+ G G+ GD G IGPPG G G++G G G G G +
Sbjct: 364 LDGAEGEQGARGKSGDFGPIGPPGPLG--------PPGDRGMQGPVGLRGTVGAR 410
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 67.3 bits (157), Expect = 4e-12
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = -1
Query: 302 MAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKG 126
M++++ +K + L +GD G GPPG G GI KG +G G PG +G+PGR G
Sbjct: 153 MSYIYCDKDRLIL---KGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIG 209
Query: 125 IRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 6
I+G++G G G G G G Q+G +G +G +G K EK
Sbjct: 210 IKGEKGKTGRKGDSGMKGDDGKIGQKGDRGERGETGFKGEK 250
Score = 59.3 bits (137), Expect = 1e-09
Identities = 46/121 (38%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Frame = -1
Query: 359 RLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK- 183
RL+L G PG PG P I G +G G+ G +G++G G PG G GI +
Sbjct: 162 RLILK-GDPGPPGP-PGI-----MGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEK 214
Query: 182 ---GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ---GTSQQGPKGFKGFSG 21
G KG G G +G G+KG RG++G G+ G GD GI T Q PK +G
Sbjct: 215 GKTGRKGDSGMKGDDGKIGQKGDRGERGETGFKGEKGDAGISVRAPTITQPPKSLITIAG 274
Query: 20 E 18
E
Sbjct: 275 E 275
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 66.5 bits (155), Expect = 8e-12
Identities = 34/76 (44%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 111
G G G G+ G G +GP G+ G DG+ KG G PGYPGF G G +G G
Sbjct: 1037 GPPGSPGDRGQTGVPGPVGPDGDIGAPGADGVPGPKGPPGPPGYPGFKGYRGPQGPPGIA 1096
Query: 110 GSDGYPGMGGDIGIQG 63
G G PG+GG IG G
Sbjct: 1097 GEPGPPGIGGGIGYMG 1112
Score = 49.6 bits (113), Expect = 9e-07
Identities = 41/112 (36%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Frame = -1
Query: 332 GWP--GATPDIPMA--FLFGEKGDMGLT----GEEGDKGEIGPPGETGESLIDGIYAKGE 177
GWP G T D M F+ + + LT G G G +GPPG G G G
Sbjct: 993 GWPKAGDTVDQQMLDHFMISQILEQNLTLFYGGLMGRSGPVGPPGPPGSPGDRG--QTGV 1050
Query: 176 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G G G G PG G+ G +G G PG G G +G QGP G G G
Sbjct: 1051 PGPVGPDGDIGAPGADGVPGPKGPPGPPGYPGFKGYRG--PQGPPGIAGEPG 1100
Score = 27.1 bits (57), Expect = 5.7
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = -1
Query: 386 ANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPG 222
A+ VPGP G PG+PG G G+ G G G G +GPPG
Sbjct: 1065 ADGVPGPKG----PPGPPGYPGFKGYRGPQGPPGIAGEPGPPGIGGGIGYMGPPG 1115
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 65.3 bits (152), Expect = 2e-11
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G+KG G+TGE+G +G G G G+ ++ ++ +G G PG G+PG +G G+ G
Sbjct: 320 GQKGQQGITGEKGARGTQGVAGAAGQIVV--CKSRIPQGSSGVPGAQGMPGPRGSTGEAG 377
Query: 107 SDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEK 15
G PG GD G G +G G KG G +
Sbjct: 378 RQGPPGANGDRGQPGAPGAEGAMGEKGNQGSR 409
Score = 60.9 bits (141), Expect = 4e-10
Identities = 39/104 (37%), Positives = 51/104 (49%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
PGP L + G+PG G D + G G G G EG +G+ G GETGE + G
Sbjct: 540 PGPGG-LQGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGRGKRGQRGETGEQGLPG 598
Query: 194 IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
A+G++G G G G+ G G++G G G G G IG G
Sbjct: 599 --ARGKQGANGPRGPRGIKGASGLQGGPGLQGPGGFKGPIGPTG 640
Score = 60.9 bits (141), Expect = 4e-10
Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
DG PG GA + G G G+ G +G G++GP G G S +G G +G
Sbjct: 756 DGAPGSDGAQGNPGPQ---GPTGTRGIPGPQGKNGKMGPTGPRGPSGKNG--EPGPQGPE 810
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGE 18
G G NGV G KG G +G G PG G G G T Q G G G +GE
Sbjct: 811 GEAGANGVSGPKGEMGPEGEAGQPGPPGPPGPNGPVGQTGQPGTPGPDGAAGE 863
Score = 56.4 bits (130), Expect = 8e-09
Identities = 40/110 (36%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG G M G KGD G G G G G G G G +GE G G
Sbjct: 538 GSPGPGGLQGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGRGKRG--QRGETGEQG 595
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ-QGPKGFKGFSGEK 15
PG G G G RG +G G G+ G G+QG +GP G G G +
Sbjct: 596 LPGARGKQGANGPRGPRGIKGASGLQGGPGLQGPGGFKGPIGPTGLQGAR 645
Score = 56.0 bits (129), Expect = 1e-08
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G G+TG G G G G G G KG++G PG G +G G KG G +G
Sbjct: 526 GANGQRGVTGPSGSPGPGGLQGAAGMPGPAG--PKGDRGSPGVSGASGAKGAKGHEGGRG 583
Query: 107 SDGYPGMGGDIGIQG-------TSQQGPKGFKGFSG 21
G G G+ G+ G +GP+G KG SG
Sbjct: 584 KRGQRGETGEQGLPGARGKQGANGPRGPRGIKGASG 619
Score = 54.8 bits (126), Expect = 2e-08
Identities = 40/112 (35%), Positives = 49/112 (43%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G G GA I + +G G+ G +G G G GE G G A G++G PG
Sbjct: 335 GTQGVAGAAGQIVVCKSRIPQGSSGVPGAQGMPGPRGSTGEAGRQGPPG--ANGDRGQPG 392
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
PG G G K G+QGS G G G G T +G G G G K E+
Sbjct: 393 APGAEGAMGEK---GNQGSRGPTGRVGPDG--KTGPKGQNGIPGRDGRKGER 439
Score = 54.4 bits (125), Expect = 3e-08
Identities = 43/117 (36%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGY 168
SDG G PG G +G +GL G+ G G G G GE+ DG G G
Sbjct: 698 SDGAQGAPGEG---------GLQGPIGLQGQRGPPGPKGSRGIAGEAGPDG--PAGPAGL 746
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGEKEE 9
G G NG G G G QG+ G G G GI G + GP G +G SG+ E
Sbjct: 747 DGKNGINGEDGAPGSDGAQGNPGPQGPTGTRGIPGPQGKNGKMGPTGPRGPSGKNGE 803
Score = 52.4 bits (120), Expect = 1e-07
Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDG----IYAKGEKGYPGYPGFNGVPGRKGIR 120
G G G +G+ G+ G GP GE G + + G + +GE G PG P G PG G
Sbjct: 790 GPTGPRGPSGKNGEPGPQGPEGEAGANGVSGPKGEMGPEGEAGQPGPP---GPPGPNGPV 846
Query: 119 GDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 30
G G G PG G G G +GP+G G
Sbjct: 847 GQTGQPGTPGPDGAAGEPGA--RGPRGKLG 874
Score = 52.0 bits (119), Expect = 2e-07
Identities = 31/82 (37%), Positives = 38/82 (46%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
+G PG G + + G KG+MG GE G G GPPG G G+ G P
Sbjct: 801 NGEPGPQGPEGEAGANGVSGPKGEMGPEGEAGQPGPPGPPGPNG--------PVGQTGQP 852
Query: 164 GYPGFNGVPGRKGIRGDQGSDG 99
G PG +G G G RG +G G
Sbjct: 853 GTPGPDGAAGEPGARGPRGKLG 874
Score = 47.2 bits (107), Expect = 5e-06
Identities = 36/102 (35%), Positives = 45/102 (44%)
Frame = -1
Query: 377 VPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
+P S + + G+PG G+T GE G G G GD+G+ G PG G
Sbjct: 353 IPQGSSGVPGAQGMPGPRGST---------GEAGRQGPPGANGDRGQPGAPGAEG----- 398
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
A GEKG G G G G G G +G +G PG G G
Sbjct: 399 ---AMGEKGNQGSRGPTGRVGPDGKTGPKGQNGIPGRDGRKG 437
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = -1
Query: 242 GEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
G +GPPG G G+ G PG G NG G+KG GD GS+G G G G+ G
Sbjct: 114 GRLGPPGRRGPP--------GQNGAPGLDGENGEQGQKGSSGDPGSEGPVGPPGKPGMDG 165
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 155 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGE 18
G G G G G QG+ G G+ G IG+QG GPKG +G +GE
Sbjct: 688 GITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGE 734
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/54 (40%), Positives = 27/54 (50%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 117
G +G G G G+ G PG GE+ G KG G PG G G PG+ G+ G
Sbjct: 114 GRLGPPGRRGPPGQNGAPGLDGENGEQG--QKGSSGDPGSEGPVGPPGKPGMDG 165
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/54 (40%), Positives = 25/54 (46%)
Frame = -1
Query: 260 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 99
G G G GPPG+ G +DG GE+G G G G G G G G DG
Sbjct: 114 GRLGPPGRRGPPGQNGAPGLDG--ENGEQGQKGSSGDPGSEGPVGPPGKPGMDG 165
Score = 35.5 bits (78), Expect = 0.016
Identities = 24/59 (40%), Positives = 27/59 (45%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
GPP R G PG GA L GE G+ G G GD G GP G G+ +DG
Sbjct: 117 GPPGRR----GPPGQNGAPG------LDGENGEQGQKGSSGDPGSEGPVGPPGKPGMDG 165
Score = 33.5 bits (73), Expect = 0.066
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGEK 15
G G G G +G PG G+ QG+ G PG G G +G + G KG KG G +
Sbjct: 526 GANGQRGVTGPSGSPGPGGL---QGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGR 582
Query: 14 EEK 6
++
Sbjct: 583 GKR 585
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 64.5 bits (150), Expect = 3e-11
Identities = 40/98 (40%), Positives = 46/98 (46%)
Frame = -1
Query: 383 NWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESL 204
N PGPP G PG PG + MA G G +G G G G GPPG G
Sbjct: 81 NGPPGPP-------GAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGAPG 133
Query: 203 IDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
+ G KG+ G G PG G+PG G+ G QG G PG
Sbjct: 134 LPG--EKGDPGLQGAPGAAGLPGAPGLPGPQGPMGPPG 169
Score = 62.5 bits (145), Expect = 1e-10
Identities = 38/86 (44%), Positives = 43/86 (50%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G G G+ G G GPPG GE G A G G PG PG G+PG KG G QG
Sbjct: 88 GAPGPPGEPGQVGMAGPPGPPGHVGEDGAPG--APGAPGPPGSPGAPGLPGEKGDPGLQG 145
Query: 107 SDGYPGMGGDIGIQGTSQQGPKGFKG 30
+ G G+ G G+ G QGP G G
Sbjct: 146 APGAAGLPGAPGLPG--PQGPMGPPG 169
>SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13)
Length = 456
Score = 63.7 bits (148), Expect = 5e-11
Identities = 42/103 (40%), Positives = 52/103 (50%)
Frame = -1
Query: 314 PDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPG 135
P P F G +G +G G +GD G G G+TG + G A G KG G G +G G
Sbjct: 272 PQGPRGFN-GSEGPVGPKGLKGDPGLKGDKGDTGANGTAG--APGVKGDKGDTGASGAKG 328
Query: 134 RKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
G++GD+G G G GD GIQG + G KG KG E K
Sbjct: 329 EAGVKGDKGDQGVMGAKGDQGIQGFN--GTKGEKGVGDLSECK 369
Score = 52.0 bits (119), Expect = 2e-07
Identities = 43/121 (35%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
P P L G+ G G T A G KGD G TG G KGE G G+ G+ G
Sbjct: 284 PVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGEAGVKGDKGD---QG 340
Query: 194 IYAKGEKGYPGYPGFNGVPGRKGIRGDQG--------SDGYPGMGGDIGIQGTSQQGPKG 39
+ G KG G GFNG G KG+ GD PG+ G I+ T + K
Sbjct: 341 V--MGAKGDQGIQGFNGTKGEKGV-GDLSECKFKIATGSSSPGVSGQSSIEVTEESDKKI 397
Query: 38 F 36
F
Sbjct: 398 F 398
Score = 45.6 bits (103), Expect = 2e-05
Identities = 35/98 (35%), Positives = 44/98 (44%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGY 168
S+G G G D + G+ G G G G KG+ G G +G AKGE G
Sbjct: 281 SEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASG--------AKGEAGV 332
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ 54
G G GV G K GDQG G+ G G+ G+ S+
Sbjct: 333 KGDKGDQGVMGAK---GDQGIQGFNGTKGEKGVGDLSE 367
Score = 39.9 bits (89), Expect = 8e-04
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEKEE 9
+G +G G+ G G G KG++GD G G G G G G +G KG G SG K E
Sbjct: 270 EGPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGE 329
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 63.3 bits (147), Expect = 7e-11
Identities = 44/119 (36%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Frame = -1
Query: 344 DGVPGWPG--ATPDIP-MAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEK 174
+G PG PG T +P G G +G G GD G++GPPG G G
Sbjct: 38 EGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPL 97
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQ------GPKGFKGFSGEK 15
G G PG G PG GI G G+ G G G +G +G GPKG G GEK
Sbjct: 98 GEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPGEK 156
Score = 60.5 bits (140), Expect = 5e-10
Identities = 37/87 (42%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYP 93
G+TGE+GD GPPG G G +G G PG G GVPG KG +G G+ G+P
Sbjct: 12 GVTGEQGD---AGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFP 68
Query: 92 GMGGDIGIQGTSQQGPKGFKGFSGEKE 12
G GD T GP G KG G ++
Sbjct: 69 GSRGD-----TGDLGPPGAKGLPGAQQ 90
Score = 52.4 bits (120), Expect = 1e-07
Identities = 45/123 (36%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG G+ P P G G G G++GD G +GP G+ G ID KG G PG
Sbjct: 101 GPPGSQGS-PGAP-----GIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPG 154
Query: 161 ---YPGFNGVPGRKGIRGD----------QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
PG G PG KG + + Q G PG G++G QG GP G G G
Sbjct: 155 EKGLPGVQGDPGIKGPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPI--GPPGRPGPKG 212
Query: 20 EKE 12
K+
Sbjct: 213 PKD 215
Score = 51.2 bits (117), Expect = 3e-07
Identities = 50/140 (35%), Positives = 58/140 (41%), Gaps = 19/140 (13%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGD-----------KGEIGPP 225
GPP S G PG PG I M G+KGD G G +G KG GPP
Sbjct: 101 GPPG----SQGSPGAPGI---IGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPP 153
Query: 224 GETGESLIDGIYA-KGEKGYPGY-------PGFNGVPGRKGIRGDQGSDGYPGMGGDIGI 69
GE G + G KG K P + G PG G GDQG G PG G G
Sbjct: 154 GEKGLPGVQGDPGIKGPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPGPKGP 213
Query: 68 QGTSQQGPKGFKGFSGEKEE 9
+ T + P G G G++ E
Sbjct: 214 KDTCPRCPPGPPGPKGKRGE 233
Score = 50.0 bits (114), Expect = 7e-07
Identities = 45/119 (37%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGAT-PDIPMAFL-FGE-----KGDMGLTGEEGDKGEIGPPGETG 213
GPP L GV G PG P F GE KG+ G TG GD+G IGPPG G
Sbjct: 151 GPPGEKGLP-GVQGDPGIKGPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPG 209
Query: 212 ESLIDGIYA---------KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
KG++G G G G PG G+RG GS G G G G G
Sbjct: 210 PKGPKDTCPRCPPGPPGPKGKRGETGPRGRPGEPGADGVRGPDGSTGERGETGLDGAPG 268
Score = 40.3 bits (90), Expect = 6e-04
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRK 129
G G +G +GE GP G GE DG+ G G G G +G PG+K
Sbjct: 223 GPPGPKGKRGETGPRGRPGEPGADGVRGPDGSTGERGETGLDGAPGKK 270
Score = 30.7 bits (66), Expect = 0.46
Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGE---SL 204
PG P D P P P P GE G G GE G G GP G TGE +
Sbjct: 205 PGRPGPKGPKDTCPRCPPGPPG-PKGKR-GETGPRGRPGEPGADGVRGPDGSTGERGETG 262
Query: 203 IDGIYAKGEK 174
+DG A G+K
Sbjct: 263 LDG--APGKK 270
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 63.3 bits (147), Expect = 7e-11
Identities = 40/109 (36%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
PG + G PG PG GE G+ G G +G KG+ GPPG GE +G
Sbjct: 186 PGAGGIIAEIQGPPGEPGER---------GEPGEPGAAGAKGAKGQPGPPGLVGEPGPEG 236
Query: 194 IYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQ 51
G G PG PG G G +G RG++G G G G +G G Q
Sbjct: 237 EPGPVGPTGVPGLPGVKGDRGEQGARGEKGEQGKTGERGPVGEAGRPGQ 285
Score = 63.3 bits (147), Expect = 7e-11
Identities = 38/88 (43%), Positives = 47/88 (53%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
G GE G++GE G PG G AKG KG PG PG G PG +G G G G PG
Sbjct: 197 GPPGEPGERGEPGEPGAAG--------AKGAKGQPGPPGLVGEPGPEGEPGPVGPTGVPG 248
Query: 89 MGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
+ G G +G +QG +G KG G+ E+
Sbjct: 249 LPGVKGDRG--EQGARGEKGEQGKTGER 274
Score = 60.5 bits (140), Expect = 5e-10
Identities = 39/99 (39%), Positives = 47/99 (47%)
Frame = -1
Query: 377 VPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
+ GPP G PG PGA G+ G GL GE G +GE GP G TG +
Sbjct: 195 IQGPPGEPG-ERGEPGEPGAAGAKGAK---GQPGPPGLVGEPGPEGEPGPVGPTGVPGLP 250
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 81
G+ KG++G G G G G+ G RG G G PG G
Sbjct: 251 GV--KGDRGEQGARGEKGEQGKTGERGPVGEAGRPGQNG 287
Score = 49.6 bits (113), Expect = 9e-07
Identities = 31/79 (39%), Positives = 42/79 (53%)
Frame = -1
Query: 257 EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 78
E D+ E E SL + + + E+ +PG PG+ G PG+ GD G +G PG G
Sbjct: 905 EPWDRQETQEARELPASL-ENLVTQEEREHPGDPGYTGKPGK---YGDDGLEGSPGPRGP 960
Query: 77 IGIQGTSQQGPKGFKGFSG 21
IG QG GP+G +G SG
Sbjct: 961 IGPQG--DPGPEGERGQSG 977
Score = 47.6 bits (108), Expect = 4e-06
Identities = 49/151 (32%), Positives = 59/151 (39%), Gaps = 28/151 (18%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPG------ETG 213
PGP G G PGA D G G G G G G IGPPG +T
Sbjct: 107 PGPKGNKG-QPGAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPLGPIGPPGPILDYNDTS 165
Query: 212 ES-----LIDGIY----AKGE---------KGYPGYPGFNGVPGRKGIRGDQGSDGYPGM 87
+ LI I +KG +G PG PG G PG G G +G+ G PG
Sbjct: 166 GAGPDPILIGSIVRSRDSKGPGAGGIIAEIQGPPGEPGERGEPGEPGAAGAKGAKGQPGP 225
Query: 86 GGDIGIQGTSQQ----GPKGFKGFSGEKEEK 6
G +G G + GP G G G K ++
Sbjct: 226 PGLVGEPGPEGEPGPVGPTGVPGLPGVKGDR 256
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/65 (44%), Positives = 31/65 (47%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ 54
GPPG+ G KG KG PG G G PG +G RG GSDG G G G G
Sbjct: 102 GPPGDPGP--------KGNKGQPGAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPLGPI- 152
Query: 53 QGPKG 39
GP G
Sbjct: 153 -GPPG 156
Score = 33.9 bits (74), Expect = 0.050
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETG 213
DG+ G PG P P+ G +GD G GE G G GPPG G
Sbjct: 949 DGLEGSPG--PRGPI----GPQGDPGPEGERGQSGPPGPPGPPG 986
Score = 30.7 bits (66), Expect = 0.46
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = -1
Query: 335 PGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 156
PG PG T G +G G G G +G+ GP GE G+S G G PG P
Sbjct: 934 PGDPGYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEGERGQS--------GPPGPPGPP 985
Query: 155 G 153
G
Sbjct: 986 G 986
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEE---GDKGEIGPPGETG 213
G G PG D + G +G +G G+ G++G+ GPPG G
Sbjct: 938 GYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEGERGQSGPPGPPG 983
>SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 62.9 bits (146), Expect = 9e-11
Identities = 46/117 (39%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
PG P R L DG PG G PM G G G G+EG G G PG G + + G
Sbjct: 130 PGMPGRNGL-DGRPGMDG-----PM----GMPGRDGTNGKEGSPGPPGAPGPPGVNGLQG 179
Query: 194 IYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKG 30
+ +G G G G GV G G +GD+G G G G+ G +G T ++G KG KG
Sbjct: 180 LQGERGPIGPKGLMGDKGVQGLPGPKGDRGPTGLSGENGEPGARGDTGRKGEKGDKG 236
Score = 62.1 bits (144), Expect = 2e-10
Identities = 42/113 (37%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G PG PG + G G MG+ G +G G+ G PG G G+ G G
Sbjct: 128 GSPGMPGRNG---LDGRPGMDGPMGMPGRDGTNGKEGSPGPPGAPGPPGV-----NGLQG 179
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS-QQGPKGFKGFSGEKEEK 6
G G G KG+ GD+G G PG GD G G S + G G +G +G K EK
Sbjct: 180 LQGERGPIGPKGLMGDKGVQGLPGPKGDRGPTGLSGENGEPGARGDTGRKGEK 232
Score = 54.8 bits (126), Expect = 2e-08
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGY 168
+G PG PGA G G GL G +G++G IGP G G+ + G+ KG++G
Sbjct: 160 EGSPGPPGAP---------GPPGVNGLQGLQGERGPIGPKGLMGDKGVQGLPGPKGDRGP 210
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGM 87
G G NG PG +G G +G G G+
Sbjct: 211 TGLSGENGEPGARGDTGRKGEKGDKGV 237
Score = 53.2 bits (122), Expect = 8e-08
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = -1
Query: 251 GDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
G +G G PG G + +DG PG G G+PGR G G +GS G PG G G
Sbjct: 122 GPRGPAGSPGMPGRNGLDG--------RPGMDGPMGMPGRDGTNGKEGSPGPPGAPGPPG 173
Query: 71 IQG----TSQQGPKGFKGFSGEK 15
+ G ++GP G KG G+K
Sbjct: 174 VNGLQGLQGERGPIGPKGLMGDK 196
Score = 40.7 bits (91), Expect = 4e-04
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -1
Query: 191 YAKGEKGYPGYPGF---NGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFS 24
Y+ G +G G PG NG+ GR G+ G G G G G G G GP G G
Sbjct: 119 YSTGPRGPAGSPGMPGRNGLDGRPGMDGPMGMPGRDGTNGKEGSPGPPGAPGPPGVNGLQ 178
Query: 23 GEKEEK 6
G + E+
Sbjct: 179 GLQGER 184
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 62.5 bits (145), Expect = 1e-10
Identities = 46/119 (38%), Positives = 52/119 (43%)
Frame = -1
Query: 377 VPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
+PGPP G PG P P L G G G GE GD G GPPG G +
Sbjct: 68 LPGPPGPPGFQ-GPPGNPAGAIGPPG--LPGPNGVNGPPGELGDMGPPGPPGPPGPQM-- 122
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G G PG PG G PG G G G G PG G G+QG + P G +G +G
Sbjct: 123 ---PPGPPGLPGPPGPAGPPGTNGELGPPGDVGPPGNPGGPGLQG-NHGNPAGIQGPNG 177
Score = 62.1 bits (144), Expect = 2e-10
Identities = 48/126 (38%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGAT-PDIPMA--FLFGEKGDMGLTGEEGD-KGEIGPPGETGES 207
PGPP DG PG+PG P+ P L G G G G G+ G IGPPG G +
Sbjct: 42 PGPPG----PDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAIGPPGLPGPN 97
Query: 206 LIDG----IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 39
++G + G G PG PG PG G+ G G G PG G++G G GP G
Sbjct: 98 GVNGPPGELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNGELGPPG--DVGPPG 155
Query: 38 FKGFSG 21
G G
Sbjct: 156 NPGGPG 161
Score = 62.1 bits (144), Expect = 2e-10
Identities = 46/125 (36%), Positives = 52/125 (41%), Gaps = 6/125 (4%)
Frame = -1
Query: 377 VPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
+PGPP + G PG PGA G G G+ G G GE GPPG G
Sbjct: 539 LPGPPGPQ-MPPGPPGLPGAP---------GPNGPPGINGPLGPPGEAGPPGNPGGPGYQ 588
Query: 197 GIYA-----KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGF 36
G + +G G PG PG NG PG G G G G PG G GPKG
Sbjct: 589 GNHGNPAGPQGPNGQPGPPGVNGPPGEIGEIGPAGLPGPPGPASPPSPPGPPGPPGPKGP 648
Query: 35 KGFSG 21
G +G
Sbjct: 649 PGPNG 653
Score = 60.5 bits (140), Expect = 5e-10
Identities = 46/123 (37%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
GPP V G PG PG + G +G GL G G G GPPG+ G + G
Sbjct: 146 GPPGD-VGPPGNPGGPGLQGNHGNPA--GIQGPNGLPGPNGPLGPPGPPGDMGPPGLPGP 202
Query: 191 YAK----GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT--SQQGPKGFKG 30
G G PG PG G PG G G G G PG G G QG + GP+G G
Sbjct: 203 QGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNG 262
Query: 29 FSG 21
G
Sbjct: 263 LPG 265
Score = 60.1 bits (139), Expect = 7e-10
Identities = 47/130 (36%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Frame = -1
Query: 377 VPGPPSRL--VLSDGVPGWPG-ATPDIPMAFLF--GEKGDMGLTGEEGDKGEIGPPGETG 213
+ GPP ++ + G+PG PG A+P P G KG G G G GE GP G G
Sbjct: 779 INGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGECGPAGNAG 838
Query: 212 ESLIDGIY-----AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQ 51
G + ++G G PG PG NG PG+ G G G G PG G
Sbjct: 839 GVGCQGNHGNPAGSQGPNGQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPP 898
Query: 50 GPKGFKGFSG 21
GPKG G +G
Sbjct: 899 GPKGPPGPNG 908
Score = 59.3 bits (137), Expect = 1e-09
Identities = 44/121 (36%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPG--ATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
GPP + G PG+ G P P G+ G G+ G G G++GPPG G
Sbjct: 322 GPPG----NPGGPGYQGNHGNPAGPQG-PNGQPGPPGINGPPGPLGDVGPPGLPGPP--G 374
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT--SQQGPKGFKGFS 24
G G PG PG G PG G G G G PG G G QG + GP+G G
Sbjct: 375 PQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQP 434
Query: 23 G 21
G
Sbjct: 435 G 435
Score = 59.3 bits (137), Expect = 1e-09
Identities = 47/134 (35%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Frame = -1
Query: 377 VPGPPSRL--VLSDGVPGWPG-ATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGES 207
+ GPP ++ + G+PG PG A+P P G G G G G G +GPPGE G +
Sbjct: 694 INGPPGQIGEMGPPGLPGPPGPASPPSPP----GPPGPPGPNGPPGPNGPLGPPGECGPA 749
Query: 206 LIDG-----------IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG- 63
G ++G G PG PG NG PG+ G G G G PG G
Sbjct: 750 GNAGGVGCQGHHGNPAGSQGPNGQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGP 809
Query: 62 TSQQGPKGFKGFSG 21
GPKG G +G
Sbjct: 810 PGPPGPKGPPGPNG 823
Score = 58.4 bits (135), Expect = 2e-09
Identities = 46/123 (37%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
GPP V G PG PG + G +G GL G G G GPPG+ G + G
Sbjct: 231 GPPGD-VGPPGNPGGPGYQGNHGNPA--GPQGPNGLPGPNGILGPPGPPGDMGPPGLPGP 287
Query: 191 ----YAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT--SQQGPKGFKG 30
G G PG PG G PG G G G G PG G G QG + GP+G G
Sbjct: 288 PGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNG 347
Query: 29 FSG 21
G
Sbjct: 348 QPG 350
Score = 57.6 bits (133), Expect = 4e-09
Identities = 47/130 (36%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Frame = -1
Query: 377 VPGPPSRL--VLSDGVPGWPG-ATPDIPMAFLF--GEKGDMGLTGEEGDKGEIGPPGETG 213
V GPP + + G+PG PG A+P P G KG G G G GE GP G G
Sbjct: 609 VNGPPGEIGEIGPAGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGESGPAGNAG 668
Query: 212 ESLIDGIYA-----KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQ 51
G + +G G PG PG NG PG+ G G G G PG G
Sbjct: 669 GVGYQGNHGNPAGVQGPNGQPGPPGINGPPGQIGEMGPPGLPGPPGPASPPSPPGPPGPP 728
Query: 50 GPKGFKGFSG 21
GP G G +G
Sbjct: 729 GPNGPPGPNG 738
Score = 54.0 bits (124), Expect = 4e-08
Identities = 43/126 (34%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGE-IGPPGETGESLID 198
PGPP L + G G PG + G G+ G G +G+ G GP G G+
Sbjct: 379 PGPPG-LPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPP 437
Query: 197 GIYAK-------GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 39
GI G G PG PG PG G+ G G +G PG+ G +G G + GP G
Sbjct: 438 GINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPG--EAGPPG 495
Query: 38 FKGFSG 21
G G
Sbjct: 496 NPGGPG 501
Score = 53.2 bits (122), Expect = 8e-08
Identities = 43/126 (34%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGE-IGPPGETGESLID 198
PGPP L + G G PG + G G+ G G +G+ G GP G G+
Sbjct: 464 PGPPG-LPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPP 522
Query: 197 GIYAK-------GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 39
GI G G PG PG PG G+ G G +G PG+ G +G G + GP G
Sbjct: 523 GINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPG--EAGPPG 580
Query: 38 FKGFSG 21
G G
Sbjct: 581 NPGGPG 586
Score = 50.8 bits (116), Expect = 4e-07
Identities = 43/122 (35%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDM---GLTGEEGDKGEIGPPGETGESL 204
P P+ L +G+ G PG D+ L G G G G G G GPPG G
Sbjct: 257 PQGPNGLPGPNGILGPPGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLG 316
Query: 203 IDG-IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGF 27
G + G G PGY G +G P G +G G G PG+ G G G GP G G
Sbjct: 317 PPGDVGPPGNPGGPGYQGNHGNPA--GPQGPNGQPGPPGINGPPGPLG--DVGPPGLPGP 372
Query: 26 SG 21
G
Sbjct: 373 PG 374
Score = 34.7 bits (76), Expect = 0.029
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -1
Query: 377 VPGPPSRL--VLSDGVPGWPG-ATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETG 213
+ GPP ++ + G+PG PG A+P P G G G G G G +GPPG+ G
Sbjct: 864 INGPPGQVGEMGPPGLPGPPGPASPPSPP----GPPGPPGPKGPPGPNGCLGPPGDAG 917
>SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45)
Length = 577
Score = 60.9 bits (141), Expect = 4e-10
Identities = 47/121 (38%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = -1
Query: 368 PPSRLVLSDGVPGWPGATPDIPMAFLFGE---KGDMGLTGEEGDKGEIGPPGETGESLID 198
P L DG G G T I L G +GD G+ G +G +G +GP G G
Sbjct: 191 PDDGLKAKDGEKGLKGETGPIGGQGLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPM 250
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 18
G G KG PG G+ G G+ G RG QG G G+ G G G S G KG G GE
Sbjct: 251 G--EPGRKGSPGDIGYVGPKGKLGDRGPQGPVGIKGIRGASGPIGDS--GIKGGYGLMGE 306
Query: 17 K 15
K
Sbjct: 307 K 307
Score = 58.8 bits (136), Expect = 2e-09
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -1
Query: 260 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 81
G EGD+G IG PG +G I AKG G G G G G KG G+ GS G PG+ G
Sbjct: 2 GLEGDRGPIGKPGVSGTK--GNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGVPG 59
Query: 80 DIGIQG-TSQQGPKGFKGFSG 21
++G G QG +G +G +G
Sbjct: 60 EVGKPGPIGYQGREGSEGSTG 80
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/75 (42%), Positives = 42/75 (56%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G KG +GL G+ G++G GP G GE G KG PG PG G PG G +G +G
Sbjct: 23 GAKGRIGLQGDRGEQGPFGPKGAGGEM--------GSKGPPGVPGEVGKPGPIGYQGREG 74
Query: 107 SDGYPGMGGDIGIQG 63
S+G G+ G G++G
Sbjct: 75 SEGSTGVYGMKGMKG 89
Score = 57.6 bits (133), Expect = 4e-09
Identities = 41/100 (41%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
GPP + G PG G+ DI G+ GD G G G KG G G G+S I G
Sbjct: 245 GPPGPM----GEPGRKGSPGDIGYVGPKGKLGDRGPQGPVGIKGIRGASGPIGDSGIKGG 300
Query: 191 YA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 75
Y GEKG G G G G G GD G G PG G+I
Sbjct: 301 YGLMGEKGTAGRLGERGKKGPFGSIGDMGPPGEPGKPGEI 340
Score = 50.4 bits (115), Expect = 5e-07
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGE-SLIDGIYAKGEKGYP 165
G+ G G D + G++G +G TG G G +G PG G I + KG+ G
Sbjct: 215 GLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPMGEPGRKGSPGDIGYVGPKGKLGDR 274
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS-QQGPKGFKG 30
G G G+ G +G G G G G G +G +GT+ + G +G KG
Sbjct: 275 GPQGPVGIKGIRGASGPIGDSGIKGGYGLMGEKGTAGRLGERGKKG 320
Score = 41.9 bits (94), Expect = 2e-04
Identities = 29/75 (38%), Positives = 35/75 (46%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G G GA I + GE+G G G G+ G GPPG GE G G +G G
Sbjct: 17 GTKGNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGVPGEVGKPG--PIGYQGREG 74
Query: 161 YPGFNGVPGRKGIRG 117
G GV G KG++G
Sbjct: 75 SEGSTGVYGMKGMKG 89
Score = 32.7 bits (71), Expect = 0.12
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESL 204
G+ G G + A GE+G G G GD G G PG+ GE L
Sbjct: 296 GIKGGYGLMGEKGTAGRLGERGKKGPFGSIGDMGPPGEPGKPGEIL 341
>SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18)
Length = 427
Score = 60.5 bits (140), Expect = 5e-10
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGP-PGETGESLIDGIYA-KGEKGY 168
G G PGA D L+G G G G +G KG P + I Y KG++G
Sbjct: 208 GSKGTPGAPGD---PGLYGPPGPPGKKGPKGPKGRTAILPNKAMIGAIPPFYGPKGDRGV 264
Query: 167 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 57
PG G G+ G G +GDQG+ G PG+ G G QG S
Sbjct: 265 PGRQGMYGLRGPPGRKGDQGTRGPPGLNGPTGAQGDS 301
Score = 54.0 bits (124), Expect = 4e-08
Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Frame = -1
Query: 344 DGVPG---WPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEK 174
DG+PG +PG D + G++G G G EG+ G GPPG G + ++ E
Sbjct: 128 DGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKGREGEDGANGPPGSPGSANMNWKQCVFEL 187
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEKA 3
G + G+R QGS G PG GD G+ G GP G KG G K A
Sbjct: 188 ELNKQNGIIYLEENCGMR-FQGSKGTPGAPGDPGLYG--PPGPPGKKGPKGPKGRTA 241
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGI---RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
KG +G+PG G +G+PG KG GDQG G PG G G +G ++G G G G
Sbjct: 116 KGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKG--REGEDGANGPPG 171
Score = 42.7 bits (96), Expect = 1e-04
Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFL-------FGEKGDMGLTGEEGDKGEIGPPGET 216
PGPP + G G G T +P + +G KGD G+ G +G G GPPG
Sbjct: 225 PGPPGK----KGPKGPKGRTAILPNKAMIGAIPPFYGPKGDRGVPGRQGMYGLRGPPGR- 279
Query: 215 GESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
KG++G G PG NG G QG G+PG
Sbjct: 280 ----------KGDQGTRGPPGLNGPTGA------QGDSGFPG 305
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/66 (39%), Positives = 32/66 (48%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G MGL G G KG G PG+ +G +G PG G++G GR+G G G
Sbjct: 120 GFPGPMGLDGIPGLKGFPGTPGD-----------QGRQGVPGKRGYDGAKGREGEDGANG 168
Query: 107 SDGYPG 90
G PG
Sbjct: 169 PPGSPG 174
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGE 18
G G G G PG G+ G G G+PG GD G QG ++G G KG GE
Sbjct: 111 GIIGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKGREGE 163
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 60.1 bits (139), Expect = 7e-10
Identities = 45/122 (36%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIP-MAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
PGPP L G+PG+PGA P G G G G GD G +GP G GE
Sbjct: 1694 PGPPG-LPGPQGIPGYPGAPAGPPGRDGPMGPPGPSGGQGPPGDMGSMGPMGMGGEHKDF 1752
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
A + G GYP + G +G G DG PG+ G G +G GP G G G
Sbjct: 1753 KRSASAQVGQYGYP--SQAASYIGTQGASGVDGPPGLAGPQGPKGMPGPPGPPGPPGAIG 1810
Query: 20 EK 15
K
Sbjct: 1811 WK 1812
Score = 56.4 bits (130), Expect = 8e-09
Identities = 38/98 (38%), Positives = 43/98 (43%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
PGPP + G PG P P + G G G G +G G GPPG G G
Sbjct: 1803 PGPPGAIGWK-GNPGNPAGPPGLD-----GPPGPPGPQGPKGWPGVPGPPGPPGAYGWKG 1856
Query: 194 IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 81
Y G PG G G PGR+G +G G G PG GG
Sbjct: 1857 -YPGNPAGPPGRDGIPGPPGRQGGKGPAGIPGIPGPGG 1893
Score = 56.0 bits (129), Expect = 1e-08
Identities = 34/81 (41%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGF-NGVPGRKGIRGDQ 111
G G MGL G +G G GPPG G G +G PGYPG G PGR G G
Sbjct: 1674 GPDGPMGLPGPQGPDGPKGPPGPPG--------LPGPQGIPGYPGAPAGPPGRDGPMGPP 1725
Query: 110 GSDGYPGMGGDIGIQGTSQQG 48
G G G GD+G G G
Sbjct: 1726 GPSGGQGPPGDMGSMGPMGMG 1746
Score = 55.6 bits (128), Expect = 1e-08
Identities = 38/95 (40%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP-GYPGFNGVPGRKGIRGDQ 111
G G GL G +G KG GPPG G I KG G P G PG +G PG G +G +
Sbjct: 1780 GVDGPPGLAGPQGPKGMPGPPGPPGPP--GAIGWKGNPGNPAGPPGLDGPPGPPGPQGPK 1837
Query: 110 GSDGYPGMGGDIGIQG-----TSQQGPKGFKGFSG 21
G G PG G G G + GP G G G
Sbjct: 1838 GWPGVPGPPGPPGAYGWKGYPGNPAGPPGRDGIPG 1872
Score = 41.1 bits (92), Expect = 3e-04
Identities = 46/126 (36%), Positives = 52/126 (41%), Gaps = 6/126 (4%)
Frame = -1
Query: 395 HYRANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGP---P 225
HY A P PP+ PG PG PD PM L G +G G G G G GP P
Sbjct: 1658 HYPAPPPPPPPA--------PGPPG--PDGPMG-LPGPQGPDGPKGPPGPPGLPGPQGIP 1706
Query: 224 GETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG---DIGIQGTSQ 54
G G G G G G G G +G GD GS G GMGG D ++Q
Sbjct: 1707 GYPGA-------PAGPPGRDGPMGPPGPSGGQGPPGDMGSMGPMGMGGEHKDFKRSASAQ 1759
Query: 53 QGPKGF 36
G G+
Sbjct: 1760 VGQYGY 1765
Score = 40.7 bits (91), Expect = 4e-04
Identities = 31/83 (37%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGL-TGEEGDKGEIGPPGETGESLID 198
PGPP G GWPG +G KG G G G G GPPG G
Sbjct: 1828 PGPPG----PQGPKGWPGVPGPPGPPGAYGWKGYPGNPAGPPGRDGIPGPPGRQG----- 1878
Query: 197 GIYAKGEKGYPGYPGFNGVPGRK 129
KG G PG PG GV R+
Sbjct: 1879 ---GKGPAGIPGIPGPGGVGKRR 1898
Score = 37.1 bits (82), Expect = 0.005
Identities = 28/73 (38%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = -1
Query: 230 PPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGM-GGDIGIQG-TS 57
PP G DG G G G G G PG G+ G QG GYPG G G G
Sbjct: 1666 PPPAPGPPGPDG--PMGLPGPQGPDGPKGPPGPPGLPGPQGIPGYPGAPAGPPGRDGPMG 1723
Query: 56 QQGPKGFKGFSGE 18
GP G +G G+
Sbjct: 1724 PPGPSGGQGPPGD 1736
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 127 PFLPGTPLKPGYPGYPFSP 183
P LPG PGYPG P P
Sbjct: 1697 PGLPGPQGIPGYPGAPAGP 1715
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 59.7 bits (138), Expect = 9e-10
Identities = 38/95 (40%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 111
G KGD G TG G KG+ G G TG G G G G G G G G +GD
Sbjct: 4 GPKGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPTGPKGDT 63
Query: 110 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
G+ G G GD G G + GPKG G +G K
Sbjct: 64 GATGPTGPKGDTGATGPT--GPKGDTGATGPNGPK 96
Score = 58.4 bits (135), Expect = 2e-09
Identities = 42/111 (37%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKG--- 171
G G G D G KGD G TG G KG+ G G G + G KG+ G
Sbjct: 64 GATGPTGPKGDTGATGPTGPKGDTGATGPNGPKGDTGATGPAGPTGPTG--PKGDTGPTD 121
Query: 170 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G G G G +GD G+ G G GD G G T GPKG G +G
Sbjct: 122 PTGPNGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKGDTGATG 172
Score = 57.2 bits (132), Expect = 5e-09
Identities = 44/115 (38%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA----KGEK 174
G G GAT A G KGD G TG G GP G TG G G K
Sbjct: 181 GPKGDTGATGPAGPAGPTGPKGDTGATGPTDPTGPTGPKGPTGPKGEIGATGPTDPTGPK 240
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSG 21
G G G G G G +GD G+ G G GD G G T GPKG G +G
Sbjct: 241 GDTGATGPTGPTGPTGPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATG 295
Score = 56.8 bits (131), Expect = 6e-09
Identities = 40/110 (36%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G G G D G KGD G TG G G GP G+TG + D G+ G G
Sbjct: 76 GATGPTGPKGDTGATGPNGPKGDTGATGPAGPTGPTGPKGDTGPT--DPTGPNGDTGATG 133
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
G G G G G +G G G G G +G T GP G G +G K
Sbjct: 134 PTGPKGDTGATGPTGPKGDTGATGPTGPTGPKGDTGATGPAGPTGPTGPK 183
Score = 52.8 bits (121), Expect = 1e-07
Identities = 35/90 (38%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G KGD G TG G G GP G+TG + G G G G G G G G
Sbjct: 163 GPKGDTGATGPAGPTGPTGPKGDTGAT-----GPAGPAGPTGPKGDTGATGPTDPTGPTG 217
Query: 107 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G G+IG G T GPKG G +G
Sbjct: 218 PKGPTGPKGEIGATGPTDPTGPKGDTGATG 247
Score = 51.2 bits (117), Expect = 3e-07
Identities = 33/81 (40%), Positives = 38/81 (46%)
Frame = -1
Query: 263 TGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 84
TG +GD G GP G G++ G G KG G G G G KG G G G G
Sbjct: 3 TGPKGDTGATGPTGPKGDTGATG--PTGPKGDTGATGPTGPTGPKGDTGATGPTGPTGPK 60
Query: 83 GDIGIQGTSQQGPKGFKGFSG 21
GD G G + GPKG G +G
Sbjct: 61 GDTGATGPT--GPKGDTGATG 79
Score = 50.8 bits (116), Expect = 4e-07
Identities = 33/82 (40%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G KGD G TG G G GP G+TG + G KG G G G G G +GD G
Sbjct: 238 GPKGDTGATGPTGPTGPTGPKGDTGAT-----GPTGPKGDTGATGPAGPTGPTGPKGDTG 292
Query: 107 SDGYPGMGGDIGIQG-TSQQGP 45
+ G G G G +G T GP
Sbjct: 293 ATGPAGPTGPTGPKGDTGATGP 314
Score = 49.6 bits (113), Expect = 9e-07
Identities = 38/112 (33%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYP 165
G G G D G G G TG G G GP G+TG + G G G
Sbjct: 22 GATGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPKGDTGATGPT 81
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSG 21
G G G G G +GD G+ G G G G +G T GP G G +G
Sbjct: 82 GPKGDTGATGPNGPKGDTGATGPAGPTGPTGPKGDTGPTDPTGPNGDTGATG 133
>SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09)
Length = 234
Score = 58.8 bits (136), Expect = 2e-09
Identities = 38/89 (42%), Positives = 46/89 (51%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
GE GD G TG G+ G+ G G G G+ KGEKGY G G G G +G +G +G
Sbjct: 1 GETGDQGATGITGEVGKEGEQGVKGARGGGGV--KGEKGYRGELGKVGPSGPQGRKGFKG 58
Query: 107 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G PG+ G+ G QG G G GF G
Sbjct: 59 EPGPPGLPGEQGPQG-KFGGLLGDGGFGG 86
Score = 48.8 bits (111), Expect = 2e-06
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGR-KGIRGDQ 111
G +G G+ GE+G +GE+G G +G G KGE G PG PG G G+ G+ GD
Sbjct: 25 GARGGGGVKGEKGYRGELGKVGPSGPQGRKGF--KGEPGPPGLPGEQGPQGKFGGLLGDG 82
Query: 110 GSDGYPGMGGDIGIQGTSQ 54
G G G +Q Q
Sbjct: 83 GFGGASHGGEMAAVQSEEQ 101
Score = 44.0 bits (99), Expect = 5e-05
Identities = 25/56 (44%), Positives = 29/56 (51%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 18
+G G G G G G KG RG G G G G++G G S GP+G KGF GE
Sbjct: 6 QGATGITGEVGKEGEQGVKGARGGGGVKGEKGYRGELGKVGPS--GPQGRKGFKGE 59
>SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 57.2 bits (132), Expect = 5e-09
Identities = 42/109 (38%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
+G+PG PG P P G G GL G G G+ GPPG G+ +G +G+P
Sbjct: 130 NGIPGHPG--PPGPS----GPPGRNGLNGIPGVSGKQGPPGPPGK--------RGRRGHP 175
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSG 21
G PG NG G G RG G G G G G G Q G G G G
Sbjct: 176 GEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVPGQPGKAGSPGERG 224
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/95 (38%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGAT-PDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
GPP R L+ G+PG G P P G++G G GE G G G PG G++
Sbjct: 143 GPPGRNGLN-GIPGVSGKQGPPGPP----GKRGRRGHPGEPGRNGTHGSPGWRGKT---- 193
Query: 194 IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
+G G G PG GVPG+ G G G G PG
Sbjct: 194 -GPRGPMGPIGPPGTPGVPGQPGKAGSPGERGPPG 227
Score = 43.2 bits (97), Expect = 8e-05
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -1
Query: 200 DGIYAKGE-----KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGF 36
DGIY+ G PG G NG+PG G G G G G+ G G+ G +QGP G
Sbjct: 108 DGIYSTESLRIQTSGIPGTHGKNGIPGHPGPPGPSGPPGRNGLNGIPGVSG--KQGPPGP 165
Query: 35 KGFSGEK 15
G G +
Sbjct: 166 PGKRGRR 172
>SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 57.2 bits (132), Expect = 5e-09
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Frame = -1
Query: 293 LFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRK---GI 123
L G KGD G G G+ G +GP G G++ KG++G G G+NG G + GI
Sbjct: 192 LSGLKGDTGPQGPRGNTGIMGPKGPKGDT-----GNKGDQGVQGLRGYNGTQGPRGNTGI 246
Query: 122 RGDQGSDGYPGMGGDIGIQGTS----QQGPKGFKGFSGEKEEK 6
G QG G G+ G G +G + QG +G +G++G + K
Sbjct: 247 MGPQGPKGDTGITGPKGPKGDTGNKGDQGVQGLRGYNGTQGAK 289
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/84 (39%), Positives = 37/84 (44%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G G G D + L G G G G G G GP G+TG I G KG KG G
Sbjct: 215 GPKGDTGNKGDQGVQGLRGYNGTQGPRGNTGIMGPQGPKGDTG---ITG--PKGPKGDTG 269
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPG 90
G GV G +G G QG+ G G
Sbjct: 270 NKGDQGVQGLRGYNGTQGAKGEAG 293
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 56.4 bits (130), Expect = 8e-09
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI----YAKGE 177
DG PG PG I G G G+ G++GD G+ G G TG G+ K
Sbjct: 146 DGRPGVPGPIGPIGPPGKIGLPGIPGMKGDKGDPGKQGLTGLTGAPGSPGLPGNCINKSN 205
Query: 176 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGE 18
G P F +PG+ G +G +G+ G G GD GI G GP G +G G+
Sbjct: 206 VGSVASPSFYCLPGKLGPQGPKGARGITGPKGDAGITGPKGTPGDPGPTGSRGRPGK 262
Score = 55.2 bits (127), Expect = 2e-08
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 111
G G G G+EG +G+ G PG G G+ G G PG G G+PG KG +GD
Sbjct: 120 GRTGAKGSRGKEGKRGKTGLPGTDGRDGRPGVPGPIGPIGPPGKIGLPGIPGMKGDKGDP 179
Query: 110 GSDGYPGMGGDIGIQG 63
G G G+ G G G
Sbjct: 180 GKQGLTGLTGAPGSPG 195
Score = 52.4 bits (120), Expect = 1e-07
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEKGYPGYPGFNGVPGRKGIR 120
G++G G TG +G +G+ G G+TG DG + G G G PG G+PG G++
Sbjct: 114 GKRGSRGRTGAKGSRGKEGKRGKTGLPGTDGRDGRPGVPGPIGPIGPPGKIGLPGIPGMK 173
Query: 119 GDQGSDGYPGMGGDIGIQGT 60
GD+G G G+ G G G+
Sbjct: 174 GDKGDPGKQGLTGLTGAPGS 193
Score = 46.4 bits (105), Expect = 9e-06
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 13/118 (11%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIP---MAFLFGEKGDMGLTGEEGDKGEIGP--------- 228
GPP ++ L G+PG G D + L G G GL G +K +G
Sbjct: 159 GPPGKIGLP-GIPGMKGDKGDPGKQGLTGLTGAPGSPGLPGNCINKSNVGSVASPSFYCL 217
Query: 227 PGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 57
PG+ G G G KG G G G PG G G +G G PG+ GD+ G S
Sbjct: 218 PGKLGPQGPKGARGITGPKGDAGITGPKGTPGDPGPTGSRGRPGKPGLPGDLNNIGCS 275
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 55.6 bits (128), Expect = 1e-08
Identities = 38/106 (35%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = -1
Query: 320 ATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGV 141
A DI + GE G+ G +GE G+ GE G GE+GES GE G G G +G
Sbjct: 654 AESDIDGSGESGESGESGKSGESGESGESGESGESGES--------GESGESGESGESGE 705
Query: 140 PGRKGIRGDQGSDGYPGMGGDIG-IQGTSQQGPKGFKGFSGEKEEK 6
G G G+ G G G GD G Q + + G EK K
Sbjct: 706 SGESGESGESGESGESGESGDSGESQDNADSSIQKRNGIPQEKVSK 751
Score = 43.2 bits (97), Expect = 8e-05
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP-GYPGFNGVPGRKGIRGDQ 111
GE G+ G +GE G+ GE G GE+GES G A GE+ GY + R I ++
Sbjct: 909 GESGESGESGESGESGESGESGESGESGESGDSAAGEESQDNGYASVGSITKRSWIPSEE 968
Score = 39.9 bits (89), Expect = 8e-04
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
K D +GE G+ G+ G GE+GES G GE G G G +G G + +
Sbjct: 893 KEDSNESGESGESGKSGESGESGESGESG--ESGESGESGESGESGESGDSAAGEESQDN 950
Query: 101 GYPGMG 84
GY +G
Sbjct: 951 GYASVG 956
Score = 34.3 bits (75), Expect = 0.038
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLI 201
GE G+ G +GE + GE+G G++GES I
Sbjct: 772 GESGESGESGESDETGELGESGKSGESSI 800
Score = 31.9 bits (69), Expect = 0.20
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGES 207
GE G+ G +GE G+ E G GE+G+S
Sbjct: 769 GESGESGESGESGESDETGELGESGKS 795
Score = 30.3 bits (65), Expect = 0.61
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPPGETGES 207
E G+ G +GE G+ GE GE GES
Sbjct: 767 EPGESGESGESGESGESDETGELGES 792
>SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 111
Score = 55.6 bits (128), Expect = 1e-08
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = -1
Query: 302 MAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKG 126
M++++ +K + L +GD G GPPG G GI KG +G G PG +G+PGR G
Sbjct: 31 MSYIYCDKDRLIL---KGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIG 87
Query: 125 IRGDQGSDGYPGMGG 81
I+G++G G G G
Sbjct: 88 IKGEKGKTGRKGDSG 102
Score = 50.0 bits (114), Expect = 7e-07
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Frame = -1
Query: 200 DGIYAKGEKGYPGYPGF------NGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 39
D + KG+ G PG PG G+ GRKG RG QG G G+ G IGI+G ++G G
Sbjct: 39 DRLILKGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKG--EKGKTG 96
Query: 38 FKGFSGEK 15
KG SG K
Sbjct: 97 RKGDSGMK 104
>SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29)
Length = 407
Score = 55.2 bits (127), Expect = 2e-08
Identities = 40/104 (38%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = -1
Query: 338 VPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG-IYAKGEKGYPG 162
VP P A+ D P G G GL G +G++G GP G G++ G ++G KG G
Sbjct: 306 VPVDPEASLDRPGEM--GPDGPAGLAGSQGEQGPQGPVGMKGDNGPQGGAGSRGTKGEAG 363
Query: 161 YPGFNGVPGRKGIRG---DQGSDGYPGMGGDIGIQ-GTSQQGPK 42
PG NG G G G + G DG PG G G G Q GP+
Sbjct: 364 PPGPNGPKGNVGPAGQVGNNGQDGTPGKDGVPGTNGGKGQPGPQ 407
Score = 53.6 bits (123), Expect = 6e-08
Identities = 35/89 (39%), Positives = 43/89 (48%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G KG GL G G +G GP GETG + G +G PG G G G +G RG G
Sbjct: 4 GIKGASGLQGGPGLQGITGPQGETG--------SDGAQGAPGEGGLQGPIGLQGQRGPPG 55
Query: 107 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G G+ G+ G G + GP G G +G
Sbjct: 56 PKGSRGIAGEAGPDGPA--GPAGLDGKNG 82
Score = 52.4 bits (120), Expect = 1e-07
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG---DIGIQG-TSQQGPKGFKGFSGE 18
KG G G PG G+ G +G G G+ G PG GG IG+QG GPKG +G +GE
Sbjct: 6 KGASGLQGGPGLQGITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGE 65
Score = 35.5 bits (78), Expect = 0.016
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
SDG G PG L G++G G G G GE GP G G + +DG
Sbjct: 29 SDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGEAGPDGPAGPAGLDG 79
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
+ G PG G I + G G G G G+ G GP G G +GI
Sbjct: 32 AQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGEAGPDGPAGPAGLDGKNGI 83
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 55.2 bits (127), Expect = 2e-08
Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -1
Query: 296 FLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 117
FL G +G G G +G G G G G G + G PG PG G+PG +G +G
Sbjct: 42 FLRGTEGPPGPQGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKG 101
Query: 116 DQGSDGYPGMGGDIGIQG-TSQQGPKGFKG 30
G G PG+ G G +G GP G G
Sbjct: 102 PPGYQGMPGIAGAPGPRGPPGPMGPPGPHG 131
Score = 54.4 bits (125), Expect = 3e-08
Identities = 36/86 (41%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGY--PGYPGFNGVPGRKGIRGDQGSDG 99
G G G +G GPPG G S + G A G +G PG PG G G G RG +G G
Sbjct: 45 GTEGPPGPQGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPG 104
Query: 98 YPGMGGDIGIQGTSQQGPKGFKGFSG 21
Y GM G G G +GP G G G
Sbjct: 105 YQGMPGIAGAPG--PRGPPGPMGPPG 128
Score = 46.8 bits (106), Expect = 7e-06
Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKG 171
++G PG G L G +G G G G + GPPG G + G KG G
Sbjct: 46 TEGPPGPQGTKGPPGSQGLSGVQGYPGAPGPRG-RSPPGPPGIPGPRGLPGYRGPKGPPG 104
Query: 170 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGP 45
Y G PG G PG +G G G G G + +S P
Sbjct: 105 YQGMPGIAGAPGPRGPPGPMGPPGPHGCASCVDYTRSSNTIP 146
Score = 41.1 bits (92), Expect = 3e-04
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -1
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ---QGPKGFKGF 27
G + +G +G PG G G PG +G+ G GYPG G G GP+G G+
Sbjct: 40 GFFLRGTEGPPGPQGTKGPPGSQGL---SGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGY 96
Query: 26 SGEK 15
G K
Sbjct: 97 RGPK 100
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 54.8 bits (126), Expect = 2e-08
Identities = 39/106 (36%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -1
Query: 329 WPGATPDI-PMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 153
W G P + P A E D IGPPG G +D KG PG G
Sbjct: 460 WQGMAPLLLPRAAAGMELNDTLTPVLRSPTSLIGPPGPPGLCNVDVC-----KGTPGIQG 514
Query: 152 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 15
G+PG++G G QG G G G G+ GT GP+G +GFSG +
Sbjct: 515 PQGLPGKQGPAGPQGRQGASGPPGIPGLNGTV--GPRGPQGFSGPR 558
Score = 54.0 bits (124), Expect = 4e-08
Identities = 33/88 (37%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
KG G+ G +G G+ GP G G +G G PG PG NG G +G +G G
Sbjct: 507 KGTPGIQGPQGLPGKQGPAGPQGR--------QGASGPPGIPGLNGTVGPRGPQGFSGPR 558
Query: 101 GYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G G G G+QG QGP G G
Sbjct: 559 GLQGTPGQNGLQGPPGPQGPMGVNNSIG 586
Score = 35.1 bits (77), Expect = 0.022
Identities = 26/73 (35%), Positives = 30/73 (41%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
GP R S G PG PG + G G GL G G G GPPG G ++
Sbjct: 526 GPQGRQGAS-GPPGIPGLNGTVGPRGPQGFSGPRGLQGTPGQNGLQGPPGPQGPMGVNN- 583
Query: 191 YAKGEKGYPGYPG 153
+ G G PG G
Sbjct: 584 -SIGPPGPPGPQG 595
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 54.4 bits (125), Expect = 3e-08
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEE 9
+G G PG+PG G GR+G RG +G+ G PG G G G G KG KG GEK E
Sbjct: 131 RGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEKGE 190
Query: 8 K 6
+
Sbjct: 191 R 191
Score = 50.0 bits (114), Expect = 7e-07
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 6
G +G PG PG G G +G RG +G G PG G G G ++G G KG G+K EK
Sbjct: 129 GPRGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEK 188
Score = 46.4 bits (105), Expect = 9e-06
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -1
Query: 266 LTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGM 87
LT G +G G PG G+ KG +G G G G PG G +G G DG G
Sbjct: 124 LTCPPGPRGPPGRPGHPGQ--------KGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGA 175
Query: 86 GGDIGIQGTSQQGPKGFKGFS--GEK 15
G G++G Q+G KG +G GEK
Sbjct: 176 VGSKGMKG--QKGEKGERGIGVRGEK 199
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQ 111
G+KG G G+ G +G G PG G DG A G KG G G G G G+RG++
Sbjct: 141 GQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEKGERG-IGVRGEK 199
Query: 110 GSDG 99
G+ G
Sbjct: 200 GAPG 203
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/78 (41%), Positives = 38/78 (48%)
Frame = -1
Query: 251 GDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
G G GPPG GE KG +G G G G PG+ G G G G PG GD G
Sbjct: 23 GPPGPAGPPGSKGE--------KGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKGDKG 74
Query: 71 IQGTSQQGPKGFKGFSGE 18
+G + GP+G KG G+
Sbjct: 75 EKGDA--GPRGLKGDPGK 90
Score = 46.4 bits (105), Expect = 9e-06
Identities = 27/66 (40%), Positives = 32/66 (48%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G KG+ G G G +G GPPG+ G A G+ G G PG G G KG G +G
Sbjct: 32 GSKGEKGNRGRRGRRGPRGPPGKPG--------ADGKPGIRGPPGPKGDKGEKGDAGPRG 83
Query: 107 SDGYPG 90
G PG
Sbjct: 84 LKGDPG 89
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 125 IRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
+RG G G PG G+ G +G ++GP+G G G
Sbjct: 21 VRGPPGPAGPPGSKGEKGNRGRRGRRGPRGPPGKPG 56
>SB_1366| Best HMM Match : Collagen (HMM E-Value=6.2e-05)
Length = 442
Score = 51.2 bits (117), Expect = 3e-07
Identities = 33/80 (41%), Positives = 40/80 (50%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G KG G G G+KG +G G G I G KG G G G G+ G KGI G++G
Sbjct: 39 GNKGIGGNKGIGGNKGIVGNKGIGGNKGIGG--NKGIGGNKGIVGNKGIVGNKGIGGNKG 96
Query: 107 SDGYPGMGGDIGIQGTSQQG 48
G G+GG+ GI G G
Sbjct: 97 IVGNKGIGGNKGIGGNKGIG 116
Score = 46.4 bits (105), Expect = 9e-06
Identities = 32/78 (41%), Positives = 39/78 (50%)
Frame = -1
Query: 248 DKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGI 69
+KG G G G I G KG G G G G+ G KGI G++G G G+GG+ GI
Sbjct: 22 NKGIGGNKGIGGNKGIGG--NKGIGGNKGIGGNKGIVGNKGIGGNKGIGGNKGIGGNKGI 79
Query: 68 QGTSQQGPKGFKGFSGEK 15
G +G G KG G K
Sbjct: 80 VG--NKGIVGNKGIGGNK 95
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 50.8 bits (116), Expect = 4e-07
Identities = 33/82 (40%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G KGD G TG G G GP G+TG + G KG G G G G G +GD G
Sbjct: 19 GPKGDTGATGPTGPTGPTGPKGDTGAT-----GPTGPKGDTGATGPAGPTGPTGPKGDTG 73
Query: 107 SDGYPGMGGDIGIQG-TSQQGP 45
+ G G G G +G T GP
Sbjct: 74 ATGPAGPTGPTGPKGDTGATGP 95
Score = 48.4 bits (110), Expect = 2e-06
Identities = 35/93 (37%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G TG +GD G GP G TG + G KG G G G G G G G
Sbjct: 10 GATGPTDPTGPKGDTGATGPTGPTGPT--------GPKGDTGATGPTGPKGDTGATGPAG 61
Query: 107 SDGYPGMGGDIGIQG----TSQQGPKGFKGFSG 21
G G GD G G T GPKG G +G
Sbjct: 62 PTGPTGPKGDTGATGPAGPTGPTGPKGDTGATG 94
>SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12)
Length = 299
Score = 50.8 bits (116), Expect = 4e-07
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G KGD G G+ G +G GPPG+ G A G++G G PG G G KG G +G
Sbjct: 143 GPKGDKGRPGKRGRRGPAGPPGQPG--------ADGKQGIRGPPGIKGERGPKGDVGPRG 194
Query: 107 SDGYPG 90
G PG
Sbjct: 195 LKGEPG 200
Score = 49.6 bits (113), Expect = 9e-07
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = -1
Query: 254 EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 75
+G G GPPG G+ G +G +G G PG G G++GIRG G G G GD+
Sbjct: 133 QGPPGNQGPPGPKGDKGRPG--KRGRRGPAGPPGQPGADGKQGIRGPPGIKGERGPKGDV 190
Query: 74 GIQG 63
G +G
Sbjct: 191 GPRG 194
Score = 48.0 bits (109), Expect = 3e-06
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGEK 15
G +G PG G G PG++G RG G G PG G GI+G ++GPKG G G K
Sbjct: 137 GNQGPPGPKGDKGRPGKRGRRGPAGPPGQPGADGKQGIRGPPGIKGERGPKGDVGPRGLK 196
Query: 14 EE 9
E
Sbjct: 197 GE 198
Score = 45.6 bits (103), Expect = 2e-05
Identities = 28/85 (32%), Positives = 39/85 (45%)
Frame = -1
Query: 296 FLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 117
++ G G+ G G +GDKG G G G + G G PG G G+ G GI+G
Sbjct: 131 YVQGPPGNQGPPGPKGDKGRPGKRGRRGPA--------GPPGQPGADGKQGIRGPPGIKG 182
Query: 116 DQGSDGYPGMGGDIGIQGTSQQGPK 42
++G G G G G G + P+
Sbjct: 183 ERGPKGDVGPRGLKGEPGRIRNAPR 207
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 50.0 bits (114), Expect = 7e-07
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = -1
Query: 257 EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 78
++G+ G GP G G+ G G PG+PG N +PG G+ G G G PG G
Sbjct: 113 QQGEAGVQGPTGPAGDP--------GMTGVPGFPGINAIPGEGGLPGGNGLPGNPGDPGR 164
Query: 77 IGIQGTSQQGPK 42
G++G +G +
Sbjct: 165 PGLKGEEFRGAR 176
Score = 43.6 bits (98), Expect = 6e-05
Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -1
Query: 338 VPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG- 162
+ G P +P+ + F + GD G EG+KGE+G AKGEKG G
Sbjct: 2 IEGGPNGFLGLPVFYTFPQ-GDPGPAAMEGNKGELG--------------AKGEKGLQGN 46
Query: 161 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 66
P G PGR RG G G PG G+ G+Q
Sbjct: 47 TPDQPGPPGR---RGSAGMKGEPGPAGEKGMQ 75
Score = 35.1 bits (77), Expect = 0.022
Identities = 23/54 (42%), Positives = 24/54 (44%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG 126
G GD G+TG G G PGE G G G PG PG G PG KG
Sbjct: 124 GPAGDPGMTGVPGFPGINAIPGEGG--------LPGGNGLPGNPGDPGRPGLKG 169
Score = 33.1 bits (72), Expect = 0.087
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -1
Query: 221 ETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD---QGSDGYPGMGGDIGIQGTSQQ 51
+ GE+ + G G G PG G G PG I G+ G +G PG GD G G +
Sbjct: 113 QQGEAGVQG--PTGPAGDPGMTGVPGFPGINAIPGEGGLPGGNGLPGNPGDPGRPGLKGE 170
Query: 50 GPKG 39
+G
Sbjct: 171 EFRG 174
Score = 29.9 bits (64), Expect = 0.81
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGE 210
GVPG+PG IP GE G G G G+ G+ G PG GE
Sbjct: 133 GVPGFPGINA-IP-----GEGGLPGGNGLPGNPGDPGRPGLKGE 170
>SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10)
Length = 106
Score = 49.6 bits (113), Expect = 9e-07
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGI---RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
KG +G+PG G +G+PG KG GDQG G PG GD G +G ++G G G G
Sbjct: 15 KGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGDDGAKG--REGEDGANGPPG 70
Score = 46.0 bits (104), Expect = 1e-05
Identities = 31/76 (40%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = -1
Query: 260 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP---GFNGVPGRKGIRGDQGSDGYPG 90
G G KG G PG G +DGI G KG+PG P G GVPG++G G +G +G G
Sbjct: 10 GIMGLKGNQGFPGPMG---LDGI--PGLKGFPGTPGDQGRQGVPGKRGDDGAKGREGEDG 64
Query: 89 MGGDIGIQGTSQQGPK 42
G G G++ K
Sbjct: 65 ANGPPGSPGSANMNWK 80
Score = 40.7 bits (91), Expect = 4e-04
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 344 DGVPG---WPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGES 207
DG+PG +PG D + G++GD G G EG+ G GPPG G +
Sbjct: 27 DGIPGLKGFPGTPGDQGRQGVPGKRGDDGAKGREGEDGANGPPGSPGSA 75
Score = 39.9 bits (89), Expect = 8e-04
Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKG 126
G G MGL G G KG G PG+ G + G G KG G G NG PG G
Sbjct: 19 GFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGDDGAKGREGEDGANGPPGSPG 73
Score = 36.7 bits (81), Expect = 0.007
Identities = 30/77 (38%), Positives = 36/77 (46%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G G+PG PM L G G G G GD+G G PG+ G+ DG AKG +G G
Sbjct: 16 GNQGFPG-----PMG-LDGIPGLKGFPGTPGDQGRQGVPGKRGD---DG--AKGREGEDG 64
Query: 161 YPGFNGVPGRKGIRGDQ 111
G G PG + Q
Sbjct: 65 ANGPPGSPGSANMNWKQ 81
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 48.8 bits (111), Expect = 2e-06
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = -1
Query: 311 DIPMAFLF-GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPG 135
++ + F+ G +G GL G+ G G G PG G +G G G PG G+PG
Sbjct: 241 NVTLGFILKGLQGPPGLNGQAGTSGAPGFPGAPG--------FQGPPGLDGMPGAPGMPG 292
Query: 134 RKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEKA 3
+G G G+ G PG G G G + P + G +E+ A
Sbjct: 293 PQGYPGGSGAPGIPGSPGMPGPPGPAGPTPIRYNGTVKCEEDTA 336
Score = 36.3 bits (80), Expect = 0.009
Identities = 25/72 (34%), Positives = 27/72 (37%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 162
G+ G PG + G G G G G G G PG G G G G PG
Sbjct: 250 GLQGPPGLNGQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPG--GSGAPGIPG 307
Query: 161 YPGFNGVPGRKG 126
PG G PG G
Sbjct: 308 SPGMPGPPGPAG 319
>SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12)
Length = 567
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = -1
Query: 272 MGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYP 93
M + G +GD+G GP G G +G KG+ Y G G+KG RG++G G P
Sbjct: 208 MCIQGPKGDRGRRGPRGRQGPQ-----GKRGPKGHTVYRRTQGAVGQKGDRGERGPQGPP 262
Query: 92 GMGGDIGIQGTSQQGP 45
G G IG +G + GP
Sbjct: 263 GPKGPIGPKG--EPGP 276
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESL 204
GE+G G G KG IGP GE G L
Sbjct: 254 GERGPQ---GPPGPKGPIGPKGEPGPPL 278
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
G+ G PG PG +G PG G G+ G +G PG G G G +GPKG +G G
Sbjct: 35 GKNGIPGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 43.2 bits (97), Expect = 8e-05
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = -1
Query: 188 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
A+G G G PG GV G+ G G G+DG G G G +G GPKG +G G
Sbjct: 30 AQGHDGKNGIPGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKG--PPGPKGSRGPKG 83
Score = 36.7 bits (81), Expect = 0.007
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 57
G G+ G I G++ K G G G G NG PG G +G G G G G G GT+
Sbjct: 32 GHDGKNGIPGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTT 91
Score = 31.9 bits (69), Expect = 0.20
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = -1
Query: 395 HYRANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGET 216
H N +PG P + G PG G G KG G G G KG GPPG T
Sbjct: 33 HDGKNGIPGIPG-VHGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTT 91
>SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04)
Length = 60
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG 126
G+ G+ G G G G G+ GE ++GI GEKG PG G G+ G KG
Sbjct: 1 GERGIDGRPGQNGTAGFSGQKGEKGLEGITITGEKGNPGPKGDRGIQGPKG 51
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 15
GE+G G PG NG G G +G++G +G + G+ G GPKG +G G K
Sbjct: 1 GERGIDGRPGQNGTAGFSGQKGEKGLEGIT-ITGEKG-----NPGPKGDRGIQGPK 50
>SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 47.6 bits (108), Expect = 4e-06
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGY-----PGFNGVPGRKGI 123
G KGD G G +GDKG+ +L D +A G + G G PG++G
Sbjct: 77 GLKGDPGPVGPKGDKGDTVSARTISATLRDN-FALGTVRDNFFILKVTQGSQGPPGKRGP 135
Query: 122 RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKE 12
G++G G PG+ GD+ GPKG KG SG E
Sbjct: 136 PGEKGDQGIPGVKGDV--------GPKGEKGDSGGPE 164
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 46.8 bits (106), Expect = 7e-06
Identities = 25/56 (44%), Positives = 30/56 (53%)
Frame = -1
Query: 188 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
A+G G G PG GVPG+ G G G+DG G G G +G GPKG +G G
Sbjct: 30 AQGHDGKNGIPGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKG--PPGPKGSRGPKG 83
Score = 34.7 bits (76), Expect = 0.029
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 57
G G+ G I G+ K G G G G NG PG G +G G G G G G GT+
Sbjct: 32 GHDGKNGIPGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTT 91
Score = 32.3 bits (70), Expect = 0.15
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = -1
Query: 395 HYRANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGET 216
H N +PG P + G PG G G KG G G G KG GPPG T
Sbjct: 33 HDGKNGIPGIPG-VPGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTT 91
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 124 IPFLPGTPLKPGYPG 168
IP +PG P KPG PG
Sbjct: 39 IPGIPGVPGKPGTPG 53
>SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09)
Length = 386
Score = 46.4 bits (105), Expect = 9e-06
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQ 111
G G G G +G KG+ G G G +G +KG++G G G GVPG +G +G Q
Sbjct: 294 GPIGPRGYNGSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGVKGDQGVPGPQGPKGAQ 353
Query: 110 G 108
G
Sbjct: 354 G 354
Score = 39.9 bits (89), Expect = 8e-04
Identities = 28/72 (38%), Positives = 36/72 (50%)
Frame = -1
Query: 245 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 66
+G IGP G G KG++G G G G +G +GDQ G G+ GD G+
Sbjct: 293 EGPIGPRGYNGSQ-----GPKGDQGVQGPIGPQRYNGTQGSKGDQ---GVQGVKGDQGVP 344
Query: 65 GTSQQGPKGFKG 30
G QGPKG +G
Sbjct: 345 G--PQGPKGAQG 354
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQ----GPKGFKGFSG 21
G +GY G G G G +G G Q +G G GD G+QG GP+G KG G
Sbjct: 297 GPRGYNGSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGVKGDQGVPGPQGPKGAQG 354
Score = 32.7 bits (71), Expect = 0.12
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA 186
G KGD G+ G +GD+G GP G G + + A
Sbjct: 327 GSKGDQGVQGVKGDQGVPGPQGPKGAQGVGNLSA 360
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
S G G G I G +G G G +G KG+ G PG G G+
Sbjct: 304 SQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGVKGDQGVPGPQGPKGAQGV 355
>SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 46.0 bits (104), Expect = 1e-05
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
+G G G G +G +GP G G+ G+ KG+KG G G G PG KG +GD G+
Sbjct: 680 EGPQGPRGFNGSEGPVGPKGLKGDP---GL--KGDKGDTGANGTAGAPGVKGDKGDTGAS 734
Query: 101 GYPG 90
G G
Sbjct: 735 GAKG 738
Score = 39.9 bits (89), Expect = 8e-04
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEKEE 9
+G +G G+ G G G KG++GD G G G G G G +G KG G SG K E
Sbjct: 680 EGPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGE 739
Score = 35.1 bits (77), Expect = 0.022
Identities = 24/67 (35%), Positives = 30/67 (44%)
Frame = -1
Query: 314 PDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPG 135
P P F G +G +G G +GD G G G+TG A G G PG G G G
Sbjct: 682 PQGPRGFN-GSEGPVGPKGLKGDPGLKGDKGDTG--------ANGTAGAPGVKGDKGDTG 732
Query: 134 RKGIRGD 114
G +G+
Sbjct: 733 ASGAKGE 739
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGES 207
G G G G +GDKG+ G G GE+
Sbjct: 714 GANGTAGAPGVKGDKGDTGASGAKGEA 740
Score = 27.5 bits (58), Expect = 4.3
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGE 237
P P L G+ G G T A G KGD G TG G KGE
Sbjct: 694 PVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGE 739
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGE 219
G+ G PG D G G G+ G++GD G G GE
Sbjct: 699 GLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGE 739
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFS 24
+GE+G G PG G G KG +G+QG G G G IG G +GPKG G S
Sbjct: 469 QGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALG--PRGPKGESGIS 520
Score = 40.7 bits (91), Expect = 4e-04
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 158 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 6
PG G G +G++GD G G G GD G QG QGP+G G G + K
Sbjct: 463 PGPRGPQGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPK 514
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -1
Query: 143 VPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 21
+PG +G +G+QG G PG G G +G +QGPKG +G G
Sbjct: 462 IPGPRGPQGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQG 503
Score = 34.3 bits (75), Expect = 0.038
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIR 120
G PG+ G+ DG G +G PGY G +G G+ GI+
Sbjct: 354 GAPGKDGKDGKDGESIVGPQGPPGYNGSDGKDGKDGIQ 391
Score = 31.9 bits (69), Expect = 0.20
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -1
Query: 377 VPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
+PGP G+ G PG GE+G G G +G G +GP G GES I
Sbjct: 462 IPGPRGPQG-EQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPKGESGIS 520
Query: 197 GI 192
+
Sbjct: 521 AL 522
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
G KG G G G G GP GE+G S + G + K P
Sbjct: 494 GPKGSQGPQGPIGALGPRGPKGESGISALRGCLHRLVKSKP 534
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 104 DGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
DG PG G G G S GP+G G++G
Sbjct: 353 DGAPGKDGKDGKDGESIVGPQGPPGYNG 380
>SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07)
Length = 232
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/56 (44%), Positives = 30/56 (53%)
Frame = -1
Query: 188 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
A+G G G PG GVPG+ G G G+DG G G G +G GPKG +G G
Sbjct: 30 AQGHDGKNGIPGDPGVPGQLGTPGKSGNDGRNGKPGAPGPKG--PPGPKGSRGPKG 83
Score = 34.3 bits (75), Expect = 0.038
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = -1
Query: 254 EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 75
+G G+ G PG+ G + G G G G G NG PG G +G G G G G
Sbjct: 31 QGHDGKNGIPGDPG---VPG--QLGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQ 85
Query: 74 GIQGTS 57
G GT+
Sbjct: 86 GPPGTT 91
Score = 33.5 bits (73), Expect = 0.066
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
+G+PG PG + G G G G G KG GP G G + G
Sbjct: 37 NGIPGDPGVPGQLGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQG 86
Score = 31.9 bits (69), Expect = 0.20
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = -1
Query: 395 HYRANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGET 216
H N +PG P + G PG G G KG G G G KG GPPG T
Sbjct: 33 HDGKNGIPGDPG-VPGQLGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTT 91
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = -1
Query: 242 GEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
G GPPG L +G KG G G G+ G KG +GDQG G PG G G G
Sbjct: 360 GPPGPPGRAPPDLKVTREIRGSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGAKGESG 419
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/63 (36%), Positives = 29/63 (46%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ 54
GPPG G + D + +G G G NG G +G +G QG G G G G +G S
Sbjct: 360 GPPGPPGRAPPDLKVTREIRGSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGAKGESG 419
Query: 53 QGP 45
P
Sbjct: 420 GPP 422
Score = 36.3 bits (80), Expect = 0.009
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
+G G G +G G GP G AKG++G G G G+ G +G +G QG
Sbjct: 116 RGKRGEPGPQGPPGPQGPTG-----------AKGDQGPEGIQGPQGIRGPEGPQGPQGPQ 164
Query: 101 GYPGMGG 81
G G G
Sbjct: 165 GLEGKAG 171
Score = 34.7 bits (76), Expect = 0.029
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -1
Query: 134 RKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
R+G RG+ G G PG G G +G QGP+G +G G
Sbjct: 115 RRGKRGEPGPQGPPGPQGPTGAKG--DQGPEGIQGPQG 150
Score = 34.7 bits (76), Expect = 0.029
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -1
Query: 374 PGPPSR----LVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGES 207
PGPP R L ++ + G G P P G +G+ G G++G KGE G PG GES
Sbjct: 362 PGPPGRAPPDLKVTREIRGSKG--PQGPNGTR-GLQGEKGPQGDQGPKGEPGTPGAKGES 418
Score = 30.7 bits (66), Expect = 0.46
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGI 123
G +G G G G KG+ GP G G GI +G +G G G G+ G+ G+
Sbjct: 123 GPQGPPGPQGPTGAKGDQGPEGIQGP---QGI--RGPEGPQGPQGPQGLEGKAGV 172
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 44.4 bits (100), Expect = 4e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = -1
Query: 176 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
+G PG PG G G G+RG++G G PG+GG + I S G G + KEE+
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPGVGGSV-IAQKSDTGDDGKEPIVYPKEER 176
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPG 222
G KGD G+ GE+GD+G G G
Sbjct: 131 GPKGDPGVRGEKGDRGIPGVGG 152
Score = 27.5 bits (58), Expect = 4.3
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -1
Query: 245 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGI----RGDQGSDG 99
+G GPPG G KG+ G G G G+PG G + D G DG
Sbjct: 121 RGPPGPPGPQGP--------KGDPGVRGEKGDRGIPGVGGSVIAQKSDTGDDG 165
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 44.0 bits (99), Expect = 5e-05
Identities = 25/66 (37%), Positives = 31/66 (46%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G +G G+ G+ G G GPPG +G Y G G PG G+PG G G +G
Sbjct: 465 GGRGPQGVRGDRGPPGPAGPPGPSGR------YVPGPPGPPGRTVI-GLPGPPGPAGPRG 517
Query: 107 SDGYPG 90
G PG
Sbjct: 518 IPGLPG 523
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 146 GVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 39
G G +G+RGD+G G G G G GP G
Sbjct: 465 GGRGPQGVRGDRGPPGPAGPPGPSGRYVPGPPGPPG 500
>SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)
Length = 88
Score = 43.6 bits (98), Expect = 6e-05
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = -1
Query: 251 GDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 78
G G GPPG G+ I +G +GY G PG G G G +GD+G G G GD
Sbjct: 1 GYPGIEGPPGPKGDR--GPIGPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGEDGSAGD 56
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/66 (39%), Positives = 31/66 (46%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
G G G G +GD+G IGP G +G +G PG G G PG KG G +G
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRG-----------PQGYQGAPGPKGTGGFPGEKGDEGPRG 49
Query: 107 SDGYPG 90
DG G
Sbjct: 50 EDGSAG 55
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/59 (40%), Positives = 28/59 (47%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
G G+ G G KG+ GP G G G A G KG G+PG G G +G G G D
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRGPQGYQG--APGPKGTGGFPGEKGDEGPRGEDGSAGDD 57
Score = 41.1 bits (92), Expect = 3e-04
Identities = 24/50 (48%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ-QGPKGFKGFSGE 18
GYPG G PG KG RG G G G G G +GT G KG +G GE
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGE 50
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -1
Query: 173 GYPGYPGFNGVPGRK---GIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGE 18
GYPG G G G + G RG QG G PG G G G +GP+G G +G+
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGEDGSAGD 56
Score = 33.5 bits (73), Expect = 0.066
Identities = 22/58 (37%), Positives = 24/58 (41%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 114
G KGD G G G +G G PG KG G+PG G G G G GD
Sbjct: 10 GPKGDRGPIGPRGPQGYQGAPG-----------PKGTGGFPGEKGDEGPRGEDGSAGD 56
Score = 30.7 bits (66), Expect = 0.46
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESL 204
G KG G GE+GD+G G G G+ L
Sbjct: 31 GPKGTGGFPGEKGDEGPRGEDGSAGDDL 58
>SB_36020| Best HMM Match : Collagen (HMM E-Value=0.31)
Length = 212
Score = 42.7 bits (96), Expect = 1e-04
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGE---TGESLIDGIYA-KGE---KGYPGYPGFNGVPGRKGI 123
KG+ + GEE KGE GE GE I G A KGE KG G + G + I
Sbjct: 82 KGEEAIKGEEAIKGEESIKGEETIKGEEAIKGEEAIKGEETIKGEEAIKGVETIKGEEAI 141
Query: 122 RGDQGSDGYPGMGGDIGIQGTSQ-QGPKGFKGFSGEKEEK 6
+G++ G + G+ I+G +G + KG K EK
Sbjct: 142 KGEEAIKGEETIKGEEAIKGEEAIKGEETIKGEEAIKREK 181
Score = 40.7 bits (91), Expect = 4e-04
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGE---TGESLIDGIYA-KGE---KGYPGYPGFNGVPGRKGI 123
KG+ + GEE KGE GE GE I G+ KGE KG G + G + I
Sbjct: 16 KGEEAIKGEEAIKGEETIKGEEAIKGEEAIKGVETIKGEEAIKGEETIKGEEAIKGEEAI 75
Query: 122 RGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEKA 3
+G + G + G+ I+G S +G + KG K E+A
Sbjct: 76 KGVEAIKGEEAIKGEEAIKGEESIKGEETIKGEEAIKGEEA 116
Score = 39.5 bits (88), Expect = 0.001
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGE---KGYPGYPGFNGVPGRKGIRGD 114
KG+ + GEE KGE GE I G+ A KGE KG G + G + I+G+
Sbjct: 52 KGEEAIKGEETIKGE---EAIKGEEAIKGVEAIKGEEAIKGEEAIKGEESIKGEETIKGE 108
Query: 113 QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
+ G + G+ I+G ++ KG + GE+ K
Sbjct: 109 EAIKGEEAIKGEETIKG--EEAIKGVETIKGEEAIK 142
Score = 37.9 bits (84), Expect = 0.003
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGE---TGESLIDGIYA-KGE---KGYPGYPGFNGVPGRKGI 123
+G+ + GEE KGE GE GE I G A KG KG G + G + I
Sbjct: 10 EGEEAIKGEEAIKGEEAIKGEETIKGEEAIKGEEAIKGVETIKGEEAIKGEETIKGEEAI 69
Query: 122 RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
+G++ G + G+ I+G ++ KG + GE+ K
Sbjct: 70 KGEEAIKGVEAIKGEEAIKG--EEAIKGEESIKGEETIK 106
>SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)
Length = 391
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/52 (42%), Positives = 26/52 (50%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG 126
+G G G G KG GPPGE G + G G G+PG +G PG KG
Sbjct: 80 RGPPGYPGIPGQKGPTGPPGEYGYNGFPG----SRHGQSGFPGLHGPPGPKG 127
Score = 39.9 bits (89), Expect = 8e-04
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 176 KGYPGYPGFNGVPGRKGIRGDQGSDGYPG-MGGDIGIQGTSQQGPKGFKG 30
+G PGYPG G G G G+ G +G+PG G G G GP G KG
Sbjct: 80 RGPPGYPGIPGQKGPTGPPGEYGYNGFPGSRHGQSGFPGL--HGPPGPKG 127
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
GPPG G+ I + +G PG PG G G++G+ GD G G PG G G
Sbjct: 8 GPPGIRGDPGIPSVV----RGPPGKPGLPGNKGKEGLPGDDGVPGQPGPPGPPG 57
Score = 35.1 bits (77), Expect = 0.022
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESL 204
PG PS + G PG PG L G KG GL G++G G+ GPPG G+ +
Sbjct: 16 PGIPS---VVRGPPGKPG---------LPGNKGKEGLPGDDGVPGQPGPPGPPGDGI 60
Score = 26.6 bits (56), Expect = 7.6
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 368 PPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETG 213
PP + G+ G PG P + G+ G G G+EG G+ G PG+ G
Sbjct: 2 PPGTISGPPGIRGDPGI-PSVVRGPP-GKPGLPGNKGKEGLPGDDGVPGQPG 51
>SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027)
Length = 617
Score = 41.9 bits (94), Expect = 2e-04
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPPGETG---ESLIDGIYAK-GEKGYPGYPGFNGVP---GRKG 126
+ GD G+ + GD G G+TG ++ GI + G+ G P PG G+P G G
Sbjct: 387 QAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQPGDTGIPTQPGDTG 446
Query: 125 IRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 18
I G G P GD GI +Q G G +G+
Sbjct: 447 IPTQAGDTGIPTQAGDTGI--PTQAGYTGIPTRAGD 480
Score = 41.1 bits (92), Expect = 3e-04
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVP---GRKGIRGD 114
+ GD G+ + GD G PG+TG G+ G P G G+P G GI
Sbjct: 414 QAGDTGIPTQAGDTGIPTQPGDTGIPT-----QPGDTGIPTQAGDTGIPTQAGDTGIPTQ 468
Query: 113 QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 9
G G P GD GI +Q G G +G+ E
Sbjct: 469 AGYTGIPTRAGDTGI--PTQAGDTGIPTQAGDIRE 501
Score = 39.1 bits (87), Expect = 0.001
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEIGPPGETG---ESLIDGIYAK-GEKGYPGYPGFNGVP---GRKGIR 120
GD G+ + GD G G+TG ++ GI + G+ G P G G+P G GI
Sbjct: 335 GDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIP 394
Query: 119 GDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 18
G G P GD GI +Q G G +G+
Sbjct: 395 TQAGDTGIPTQAGDTGI--PTQAGDTGIPTQAGD 426
>SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = -1
Query: 338 VPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIY 189
VP PG P I + G KG GL G G KGE GP GE G + G+Y
Sbjct: 460 VPTVPGPQPPI----IVGSKGPDGLRGYRGPKGEPGPKGEPGYKVCIGLY 505
>SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024)
Length = 60
Score = 40.7 bits (91), Expect = 4e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = -1
Query: 224 GETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 81
G+ G+ DGI G G PG PG +G PG++G+ G G G PG+ G
Sbjct: 11 GKDGKDGKDGI--DGRDGRPGPPGRHGFPGQRGMPGGTGPPGPPGIIG 56
Score = 33.9 bits (74), Expect = 0.050
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIR 120
G+ G G G +G G GPPG G G++G PG G G PG GIR
Sbjct: 11 GKDGKDGKDGIDGRDGRPGPPGRHG--------FPGQRGMPGGTGPPGPPGIIGIR 58
>SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 221
Score = 39.9 bits (89), Expect = 8e-04
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = -1
Query: 299 AFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIR 120
A L G + M +G +G G + G G +G PG G G GR G R
Sbjct: 62 AALGGAQPQMNTSGLQGRLGSLNKGSVQGRLGARG-RGRGMARGPGR-GMVGARGRAGFR 119
Query: 119 GDQGSDGYPGMGGDIGIQ-----GTSQQGPKGFKGFSG 21
G++G PG GG G + G ++ GP+G F G
Sbjct: 120 GNRGGFTSPGRGGAAGFRGRGRGGMTRGGPRGRASFGG 157
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS-QQGPKGFKGFSGE 18
G +GY G G G G +G +G G+ G G G G GT+ QQGP+G G G+
Sbjct: 206 GPRGYNGSRGPPGPSGPQGQQGPPGTKGPQGFMGPRGHNGTAGQQGPQGPPGPKGD 261
Score = 38.3 bits (85), Expect = 0.002
Identities = 27/80 (33%), Positives = 37/80 (46%)
Frame = -1
Query: 392 YRANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETG 213
Y + P PS G PG G P F+ G +G G G++G +G GP G+TG
Sbjct: 210 YNGSRGPPGPSGPQGQQGPPGTKG-----PQGFM-GPRGHNGTAGQQGPQGPPGPKGDTG 263
Query: 212 ESLIDGIYAKGEKGYPGYPG 153
+ G +G +G PG G
Sbjct: 264 PAGPGG--PRGNQGPPGPSG 281
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = -1
Query: 260 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 153
G++GD+G++GPPG G + G +G++G PG PG
Sbjct: 256 GQKGDRGDMGPPGHPGPPGVRG--RRGKRGPPGPPG 289
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 84
+G+ G PG+PG GV GR+G RG G G P G
Sbjct: 261 RGDMGPPGHPGPPGVRGRRGKRGPPGPPGPPNGG 294
Score = 36.3 bits (80), Expect = 0.009
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = -1
Query: 203 IDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
+DG KG++G G PG G PG +G RG +G G PG
Sbjct: 254 VDG--QKGDRGDMGPPGHPGPPGVRGRRGKRGPPGPPG 289
Score = 34.3 bits (75), Expect = 0.038
Identities = 24/68 (35%), Positives = 31/68 (45%)
Frame = -1
Query: 209 SLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 30
SL+ + G+KG G G G PG G+RG +G G PG G G + P
Sbjct: 247 SLLRQKWVDGQKGDRGDMGPPGHPGPPGVRGRRGKRGPPGPPGP--PNGGATPHPGAMPT 304
Query: 29 FSGEKEEK 6
SGE +K
Sbjct: 305 PSGEPPDK 312
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 176 KGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
+G G PG +G+PG+ G+ G G+ G PG
Sbjct: 124 QGPQGLPGRDGLPGKAGLPGRDGAMGPPG 152
Score = 29.9 bits (64), Expect = 0.81
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG-YPGFNGVPGRKG 126
G++GDMG G G G G G+ G G G +PG P +G P KG
Sbjct: 259 GDRGDMGPPGHPGPPGVRGRRGKRGPPGPPGPPNGGATPHPGAMPTPSGEPPDKG 313
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
+G G G PG G+PGR G G G D
Sbjct: 127 QGLPGRDGLPGKAGLPGRDGAMGPPGRD 154
>SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 39.1 bits (87), Expect = 0.001
Identities = 35/122 (28%), Positives = 42/122 (34%)
Frame = -1
Query: 395 HYRANWVPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGET 216
H +PGPP PG G P G G G +G PPG+
Sbjct: 234 HQGYGTLPGPP---------PGQQGYGPPPGQQGYGAPPGQQGYGPPLGQQGYGPPPGQQ 284
Query: 215 GESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGF 36
G G G PG G+ PG++G G GY G G G Q +GF
Sbjct: 285 GYGPPPGQQGYGPP--PGQQGYGSPPGQQGYGPPPGQQGYGPPAGQQG-YGPPQGQQQGF 341
Query: 35 KG 30
G
Sbjct: 342 SG 343
>SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07)
Length = 198
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = -1
Query: 293 LFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGI 123
L G +G GL G++GDKG+ G G G+ KG+KG G G G+ G +G+
Sbjct: 99 LQGAQGARGLKGDKGDKGDQGIQGLKGD--------KGDKGEKGDKGDQGLKGNQGV 147
Score = 36.7 bits (81), Expect = 0.007
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = -1
Query: 188 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 57
A+G KG G G G+ G KG +GD+G G G G G QG S
Sbjct: 105 ARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQGVS 148
Score = 33.9 bits (74), Expect = 0.050
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFN 147
G++G GL G++GDKGE G G+ G G+ A G F+
Sbjct: 116 GDQGIQGLKGDKGDKGEKGDKGDQGLKGNQGVSATATPIITGKAAFS 162
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -1
Query: 347 SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGES 207
+ G G G D + G KGD G GE+GDKG+ G G G S
Sbjct: 102 AQGARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQGVS 148
>SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGI 69
GP G G + G KG++G G G G G +G +GDQG G+ G G+ G+
Sbjct: 822 GPMGPRGFNGSQG--PKGDQGVQGPIGPQGYNGTQGPKGDQGIQGFNGTKGESGV 874
Score = 35.1 bits (77), Expect = 0.022
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
G G G G GP G+ G +G G GY G G G +GI+G G+ G G
Sbjct: 822 GPMGPRGFNGSQGPKGDQG--------VQGPIGPQGYNGTQGPKGDQGIQGFNGTKGESG 873
Query: 89 MG 84
+G
Sbjct: 874 VG 875
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIG 231
G KGD G+ G G KGE G
Sbjct: 855 GPKGDQGIQGFNGTKGESG 873
>SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036)
Length = 60
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGE------TGESLIDGIYAKGEKGYPGYPGFNGVPGR 132
G +G G+TG +G +G PPG+ T + KG+KG PG PG NG GR
Sbjct: 2 GARGPPGVTGAQGPRG---PPGQVLYMNSTSGNTTAVPGPKGDKGDPGRPGLNGTDGR 56
Score = 31.5 bits (68), Expect = 0.27
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = -1
Query: 242 GEIGPPGETGESLIDGIYAKGEKGYPGYPGF-NGVPGRK----GIRGDQGSDGYPGMGGD 78
G GPPG TG A+G +G PG + N G G +GD+G G PG+ G
Sbjct: 2 GARGPPGVTG--------AQGPRGPPGQVLYMNSTSGNTTAVPGPKGDKGDPGRPGLNGT 53
Query: 77 IG 72
G
Sbjct: 54 DG 55
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGES 207
G GDMG G +GDKG+ G PGETG +
Sbjct: 192 GIPGDMGPRGAKGDKGDRGKPGETGSA 218
Score = 36.3 bits (80), Expect = 0.009
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 137 GRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
G+K ++G QG G G GD G QG GP+G KG G++
Sbjct: 168 GKKCVQGPQGLRGPRGYSGDRGPQGIPGDMGPRGAKGDKGDR 209
Score = 35.5 bits (78), Expect = 0.016
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
+G +GY G G G+PG G RG +G G G G+ G
Sbjct: 179 RGPRGYSGDRGPQGIPGDMGPRGAKGDKGDRGKPGETG 216
Score = 32.7 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNG 144
G +G G G GD+G G PG+ G AKG+KG G PG G
Sbjct: 174 GPQGLRGPRGYSGDRGPQGIPGDMGPR-----GAKGDKGDRGKPGETG 216
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -1
Query: 155 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 18
G G+ G +G GD+G G P GD+G +G +G KG +G GE
Sbjct: 174 GPQGLRGPRGYSGDRGPQGIP---GDMGPRGA--KGDKGDRGKPGE 214
>SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2409
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 224 GETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGI 69
G TG S + G+ G GY GY G+ G+ G+ G+ G G G G G G+
Sbjct: 1773 GMTGMSGMTGMSGMTGLTGYTGYTGYTGMTGKTGMSGKTGMSGVTGDSGMSGM 1825
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 242 GEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 84
G G G TG S + G+ G GY G G G+ G+ G+ G G G GMG
Sbjct: 1773 GMTGMSGMTGMSGMTGLTGYTGYTGYTGMTGKTGMSGKTGMSGVTGDSGMSGMG 1826
Score = 31.9 bits (69), Expect = 0.20
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 374 PGPPSRLVLS-DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
P PP + G+ G G + + G G G+TG+ G G+ G G TG+S +
Sbjct: 1764 PSPPFSMKSGMTGMSGMTGMSGMTGLTGYTGYTGYTGMTGKTGMSGKTGMSGVTGDSGMS 1823
Query: 197 GI 192
G+
Sbjct: 1824 GM 1825
>SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003)
Length = 157
Score = 37.5 bits (83), Expect = 0.004
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
G +G G PG+ GVPG +G++G++G G G
Sbjct: 1 GPQGIQGNPGYQGVPGPRGMQGEEGPAGNKG 31
Score = 33.1 bits (72), Expect = 0.087
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 128 GIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 30
G +G QG+ GY G+ G G+QG ++GP G KG
Sbjct: 1 GPQGIQGNPGYQGVPGPRGMQG--EEGPAGNKG 31
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQG 108
+G GY G PG G+ G +G G++G
Sbjct: 6 QGNPGYQGVPGPRGMQGEEGPAGNKG 31
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLID 198
G G G+ G G +GE GP G G ++
Sbjct: 7 GNPGYQGVPGPRGMQGEEGPAGNKGPQWVN 36
>SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048)
Length = 763
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 158 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS-QQGPKG 39
PG G PG +G+ G QG PG GDIG G+S QGP G
Sbjct: 176 PGPQGPPGPQGLPGPQG---VPGPAGDIGPSGSSGPQGPPG 213
Score = 30.7 bits (66), Expect = 0.46
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 81
+G G G PG GVPG G G GS G G G
Sbjct: 179 QGPPGPQGLPGPQGVPGPAGDIGPSGSSGPQGPPG 213
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 36.3 bits (80), Expect = 0.009
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGM 87
KG+KG G G G G KG +GDQG+ G G+
Sbjct: 257 KGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKGL 289
Score = 35.1 bits (77), Expect = 0.022
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 134 RKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 15
++G+RG +G G G GD GIQG +G KG +G G K
Sbjct: 247 KQGLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAK 287
Score = 34.7 bits (76), Expect = 0.029
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 81
KG+KG G G G+ G KG +GD+G G G G
Sbjct: 254 KGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKG 288
Score = 33.1 bits (72), Expect = 0.087
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPG 135
GL G +GDKG+ G G+ G I G KG+KG G G G G
Sbjct: 249 GLRGPKGDKGDKGDRGDQG---IQGF--KGDKGDKGDQGAQGAKG 288
Score = 31.9 bits (69), Expect = 0.20
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETG 213
G++GD G+ G +GDKG+ G G G
Sbjct: 261 GDRGDQGIQGFKGDKGDKGDQGAQG 285
Score = 31.1 bits (67), Expect = 0.35
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -1
Query: 293 LFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKG 171
L G KGD G G+ GD+G G G+ G+ G A+G KG
Sbjct: 250 LRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQG--AQGAKG 288
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
G+KGD G G +G KG+ G G+ G G+
Sbjct: 258 GDKGDRGDQGIQGFKGDKGDKGDQGAQGAKGL 289
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 101 GYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
G G GD G +G +G +G +GF G+K +K
Sbjct: 249 GLRGPKGDKGDKG--DRGDQGIQGFKGDKGDK 278
>SB_1292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 36.3 bits (80), Expect = 0.009
Identities = 22/69 (31%), Positives = 28/69 (40%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
G + EG G G + G YA G GYP G+ V G + G GYP
Sbjct: 3 GYSAVEGYPSVGGYSAVEGYPAVGGYYAVG--GYPAVGGYYAVGGYPAVGGYYAVGGYPA 60
Query: 89 MGGDIGIQG 63
+GG + G
Sbjct: 61 VGGYYAVGG 69
Score = 31.1 bits (67), Expect = 0.35
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = -1
Query: 269 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
G + EG G G + G YA G GYP G+ V G + G GY
Sbjct: 15 GYSAVEGYPAVGGYYAVGGYPAVGGYYAVG--GYPAVGGYYAVGGYPAVGGYYAVGGYYA 72
Query: 89 MGGDIGIQG 63
+GG + G
Sbjct: 73 VGGYYAVGG 81
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -1
Query: 215 GESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
G + G YA G GYP G+ V G + G GY +GG + G
Sbjct: 45 GYPAVGGYYAVG--GYPAVGGYYAVGGYYAVGGYYAVGGYYAVGGYPSVGG 93
>SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029)
Length = 367
Score = 35.9 bits (79), Expect = 0.012
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 78
KGEKG G G+ G KG +GD+G G G+ GD
Sbjct: 104 KGEKGDKCDKGDQGIQGVKGDKGDKGDQGAQGVKGD 139
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPPGETG 213
+KGD G+ G +GDKG+ G G G
Sbjct: 112 DKGDQGIQGVKGDKGDKGDQGAQG 135
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESL 204
G++G G+ G++GDKG+ G G G+ L
Sbjct: 114 GDQGIQGVKGDKGDKGDQGAQGVKGDPL 141
Score = 26.6 bits (56), Expect = 7.6
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -1
Query: 299 AFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 165
A L GEKGD ++GD+G G G+ G+ G A+G KG P
Sbjct: 101 ASLKGEKGDKC---DKGDQGIQGVKGDKGDKGDQG--AQGVKGDP 140
>SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 35.5 bits (78), Expect = 0.016
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 191 YAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 66
+ +G G G PG G G G RG G+ G PG G G+Q
Sbjct: 74 WLRGRDGRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSGVQ 115
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -1
Query: 125 IRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSG 21
+RG G DG PG+ G G G +GP G +G SG
Sbjct: 75 LRGRDGRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSG 113
>SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042)
Length = 593
Score = 35.1 bits (77), Expect = 0.022
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPP-GETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
+ D G+ G +G G G G+ G+ G+ G G G NG G GD G
Sbjct: 27 DDADDGVDGSDGSNGNGGDDDGDDGDGGNCDDDDSGDDGSDGNAG-NGSDGDDDDSGDDG 85
Query: 107 SDGYPGMGGD 78
SDG G G D
Sbjct: 86 SDGNAGNGSD 95
Score = 33.5 bits (73), Expect = 0.066
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEK--GYPGYPGFNGVPGRKGIRGDQ 111
+ GD G G G+ G G ++G+ DG G G G G +G G GD
Sbjct: 60 DSGDDGSDGNAGN-GSDGDDDDSGDDGSDGNAGNGSDNDGSDGNGGEDGSDGAGDNDGDD 118
Query: 110 GSDGYPGMGG 81
GSDG GG
Sbjct: 119 GSDGEADDGG 128
Score = 29.1 bits (62), Expect = 1.4
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPPG-ETGESLIDGIYAKGEKGYPGYP-GFNGVPGR--KGIRG 117
+ D G+ G +G G G + + +DG + G G G G +G G G
Sbjct: 5 DDADGGVDGSDGSNGNGGDDDVDDADDGVDG--SDGSNGNGGDDDGDDGDGGNCDDDDSG 62
Query: 116 DQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKE 12
D GSDG G G D + G G G + +
Sbjct: 63 DDGSDGNAGNGSDGDDDDSGDDGSDGNAGNGSDND 97
>SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 34.7 bits (76), Expect = 0.029
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 179 EKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG-DIGIQGTSQQGPKGFKGFSGE 18
E G PGY G G G ++G +GY G GG + G + + G +G GE
Sbjct: 393 EDGNPGYGGSQFRGGSSGNGAEEGDNGYSGGGGAGLNSNGRNNKNFGGSRGTGGE 447
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -1
Query: 251 GDKGEIGPPGETGESLIDGIYAKG-EKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 75
G E G PG G G G E+G GY G G R ++ G G GG+
Sbjct: 389 GSINEDGNPGYGGSQFRGGSSGNGAEEGDNGYSGGGGAGLNSNGRNNKNFGGSRGTGGEG 448
Query: 74 G 72
G
Sbjct: 449 G 449
>SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04)
Length = 181
Score = 34.7 bits (76), Expect = 0.029
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 176 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGM 87
+G PG PG G G G+RG++G G PG+
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPGV 150
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKG 240
G KGD G+ GE+GD+G
Sbjct: 131 GPKGDPGVRGEKGDRG 146
>SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 34.3 bits (75), Expect = 0.038
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 155 GFNGVPGRKGIRGDQGSDG-YPGMGGDIGIQGTSQQG 48
GF G PG G+ G+QG G + G+ GD G G S G
Sbjct: 1 GFKGEPGPPGLPGEQGPQGKFGGLLGDGGFGGASYGG 37
Score = 30.3 bits (65), Expect = 0.61
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGR-KGIRGDQGSDGYPGMGGDI 75
KGE G PG PG G G+ G+ GD G G GG++
Sbjct: 3 KGEPGPPGLPGEQGPQGKFGGLLGDGGFGG-ASYGGEM 39
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 81
G KG PG PG G G +G G DG G GG
Sbjct: 1 GFKGEPGPPGLPGEQGPQGKFGGLLGDG--GFGG 32
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 33.9 bits (74), Expect = 0.050
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 111
GE G G E G+ E+G E GE +G+ ++ GE G G +G G+
Sbjct: 765 GEAGKAGEASEAGEASEVGEASEAGE---NGVASEAGEDGEASEAGEDGEASEASEAGEA 821
Query: 110 GSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEE 9
G + G + G G G +GE E
Sbjct: 822 SEASEAGEASEASEAGEAGEAGEAGEAGEAGEAGE 856
>SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 33.9 bits (74), Expect = 0.050
Identities = 32/103 (31%), Positives = 43/103 (41%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
G P +++ G PG+ D + G+ GD+ + G+ G IG PG + D
Sbjct: 46 GDPGHVMII-GDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHM-MIIGDPG 103
Query: 191 YAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
Y G PGY G PG I GD G G G + I G
Sbjct: 104 YVM-IIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIG 145
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 353 VLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPG 222
V+ G PG+ D + G+ GD+ + G+ G IG PG
Sbjct: 105 VMIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPG 148
>SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018)
Length = 188
Score = 33.9 bits (74), Expect = 0.050
Identities = 32/103 (31%), Positives = 43/103 (41%)
Frame = -1
Query: 371 GPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGI 192
G P +++ G PG+ D + G+ GD+ + G+ G IG PG + D
Sbjct: 40 GDPGHVMII-GDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHM-MIIGDPG 97
Query: 191 YAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
Y G PGY G PG I GD G G G + I G
Sbjct: 98 YVM-IIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIG 139
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 353 VLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPG 222
V+ G PG+ D + G+ GD+ + G+ G IG PG
Sbjct: 99 VMIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPG 142
>SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05)
Length = 510
Score = 33.5 bits (73), Expect = 0.066
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
KG+K G G GV KG +GDQG+ G G
Sbjct: 352 KGDKDDKGDQGMQGVKDEKGDKGDQGAQGVKG 383
Score = 31.9 bits (69), Expect = 0.20
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 191 YAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGY 96
+ +G +G G G G PG G+RGD+G D +
Sbjct: 237 FKQGLQGPKGERGPPGAPGAAGVRGDRGDDSW 268
Score = 29.9 bits (64), Expect = 0.81
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 78
KG+KG G G+ G K +GD+G G G+ G+
Sbjct: 349 KGDKGDKDDKGDQGMQGVKDEKGDKGDQGAQGVKGN 384
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -1
Query: 299 AFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKG 171
A L G KGD G ++GD+G G E G+ G A+G KG
Sbjct: 343 ASLQGPKGDKGDKDDKGDQGMQGVKDEKGDKGDQG--AQGVKG 383
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 260 GEEGDKGEIGPPGETGESLIDG 195
G +G KGE GPPG G + + G
Sbjct: 240 GLQGPKGERGPPGAPGAAGVRG 261
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 137 GRKGIRGDQGSDGYPGMGGDIG 72
G +G RG+QG G PG G G
Sbjct: 12 GVQGPRGEQGPQGAPGRDGSSG 33
>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
Length = 863
Score = 33.5 bits (73), Expect = 0.066
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDG 99
KG++G G PG G+PG +G +G QG+ G
Sbjct: 490 KGDRGPAGPPGPRGLPGAQGPQGIQGTPG 518
Score = 32.7 bits (71), Expect = 0.12
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 153
E G G +GD+G GPPG G + G A+G +G G PG
Sbjct: 480 ENKSHGAAGPKGDRGPAGPPGPRG---LPG--AQGPQGIQGTPG 518
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -1
Query: 155 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT 60
G G G +G G G G PG G GIQGT
Sbjct: 485 GAAGPKGDRGPAGPPGPRGLPGAQGPQGIQGT 516
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 33.5 bits (73), Expect = 0.066
Identities = 34/121 (28%), Positives = 44/121 (36%)
Frame = -1
Query: 377 VPGPPSRLVLSDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLID 198
V P L + G+ +PD+ A L G D G KG G G +
Sbjct: 321 VKTPEVELPVRQGIENAAFESPDLD-ASLEGTDVDFRGPSFNGPKGGASFDGPGGS--LR 377
Query: 197 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 18
G G KG + G +G G +G + G G + G S GPKG F G
Sbjct: 378 GPSFDGPKGGASFGGPDGSLRGPSFDGPKGGVSFNGPDGSLS--GPSFDGPKGGASFGGP 435
Query: 17 K 15
K
Sbjct: 436 K 436
Score = 26.2 bits (55), Expect = 10.0
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
KGD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 1194 KGDIDTT-DINLKGDIDTPDVNVKGDIDGPDA--DVHGPGWK-FKG-PKMPKFKGP--SF 1246
Query: 101 GYPGMGGDIGIQGTSQQGPK 42
G G GDI G GPK
Sbjct: 1247 GGKGKSGDIDYDGPDFDGPK 1266
>SB_50127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 32.7 bits (71), Expect = 0.12
Identities = 33/81 (40%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 99
G G+ G DKG G G G + G A G G G NG G GI D+G+DG
Sbjct: 25 GGYGMIGIGIDKGN-GGYGMIGIGIDKGNGAYGMIGI-GIDKGNGEYGMMGIGKDKGNDG 82
Query: 98 YPGMGGDIGI-QGTSQQGPKG 39
Y GM G IGI +G G G
Sbjct: 83 Y-GMIG-IGIDKGNGAYGMIG 101
Score = 27.5 bits (58), Expect = 4.3
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 99
G+ G+ G DK G G G + G G G G NG G KGI D+G+ G
Sbjct: 137 GEYGMIGIGIDKSN-GGYGMIGICIDKGNSEYGMIGI-GIDKGNGGYGMKGIGIDKGNGG 194
Query: 98 YPGMGGDIGI 69
Y GM G IGI
Sbjct: 195 Y-GMIG-IGI 202
>SB_45152| Best HMM Match : DUF320 (HMM E-Value=2.9)
Length = 293
Score = 32.7 bits (71), Expect = 0.12
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 7/102 (6%)
Frame = -1
Query: 329 WPGAT-----PDIPMAFLFGEKGDMGLTGEEGDK--GEIGPPGETGESLIDGIYAKGEKG 171
WPG T + + G G G G G GP GE G++ ++G G
Sbjct: 162 WPGGTGGNGATSTSSSHVGGGGGGFYTDGSSGSNFGGAYGPGGEGGKAFLNG-------G 214
Query: 170 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGP 45
G +NGVPG G G +G G GG G G P
Sbjct: 215 VGGRSVWNGVPGGFGGGGGVWGNGGGGGGGG-GYSGGGSGNP 255
>SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGE 177
G G G+ GEEG G GP G+ G + ++G KGE
Sbjct: 76 GVPGPRGMQGEEGPAGNKGPQGDPGPAAMEG--NKGE 110
Score = 31.1 bits (67), Expect = 0.35
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 134 RKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 18
R G G +G G PG+ G G+QG ++GP G KG G+
Sbjct: 62 RAGGPGRRGPVGPPGVPGPRGMQG--EEGPAGNKGPQGD 98
Score = 27.5 bits (58), Expect = 4.3
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 341 GVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGE 177
GVPG G + A G +GD G EG+KGE+ + +S ID + A+ +
Sbjct: 76 GVPGPRGMQGEEGPAGNKGPQGDPGPAAMEGNKGEL----MSWDSYIDNLLAQAK 126
Score = 26.6 bits (56), Expect = 7.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -1
Query: 368 PPSRLVLSDGV--PGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPG 222
P SR V+ G G PG + + G +G G G G+KG G PG
Sbjct: 50 PSSRSVVGCGGLRAGGPGRRGPVGPPGVPGPRGMQGEEGPAGNKGPQGDPG 100
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKG 171
G G G+ G G +GE GP G G G A +G KG
Sbjct: 70 GPVGPPGVPGPRGMQGEEGPAGNKGPQGDPGPAAMEGNKG 109
>SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 32.7 bits (71), Expect = 0.12
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -1
Query: 176 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
K Y GY PG KG +G QG G PG+ G G G
Sbjct: 229 KHYFGYGPLLCSPGAKGAQGAQGPKGNPGLRGRPGATG 266
>SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 32.3 bits (70), Expect = 0.15
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 9
KG+ G G G PGR G RG +G+ G G GG G G GP+G F +E
Sbjct: 333 KGDSRGGGRGGRGGRPGRGG-RGGRGASGGRGRGGGRGGFG-GGAGPQGEGHFEINSDE 389
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 137 GRKGIRGDQGSD--GYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
G ++ +QG D G+ GG+ G +GT +G GF G ++ +
Sbjct: 127 GDSPVKVEQGGDRGGFGSRGGNRGARGTGGRGRGGFGANRGGRKRE 172
>SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 417
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGD 114
+G KG G PG +G PG +G RGD
Sbjct: 256 QGPKGERGLPGASGAPGARGDRGD 279
>SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078)
Length = 102
Score = 32.3 bits (70), Expect = 0.15
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -1
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 66
G G PG G G G RG G+ G PG G G+Q
Sbjct: 4 GRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSGVQ 39
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 31.9 bits (69), Expect = 0.20
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -1
Query: 323 GATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGES 207
G T + A + GE G++ GE G+ G+ GETGE+
Sbjct: 256 GETVEASEAGVAGEVGEVSEAGEAGEVGKASEAGETGEA 294
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 323 GATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGES 207
G T + A + GE G++ G G+ G+ GETGE+
Sbjct: 112 GETVEASEAGVAGEVGEVSEAGVAGEVGKASEAGETGEA 150
Score = 26.6 bits (56), Expect = 7.6
Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 4/109 (3%)
Frame = -1
Query: 323 GATPDIPMAFLFGEKGDMGLT---GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 153
G + A + GE + G T E G GE+G E GE+ + E G G
Sbjct: 238 GKASEAGEASVAGEASEAGETVEASEAGVAGEVGEVSEAGEA--GEVGKASEAGETGEAS 295
Query: 152 FNGVPGRKGIRGDQGSDGYPGMGGDIG-IQGTSQQGPKGFKGFSGEKEE 9
G G+ + G ++G + S+ G +GE E
Sbjct: 296 EAGEASEVGVAREASEAGEASEASEVGEVSEASEAGEASEAVEAGEASE 344
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEIGPPGETGES 207
G+ GE G+ GE GETGE+
Sbjct: 468 GEASEAGEAGEIGEASEAGETGEA 491
>SB_11354| Best HMM Match : Collagen (HMM E-Value=0.09)
Length = 116
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGD 114
+G KG G PG +G PG +G RGD
Sbjct: 43 QGPKGERGPPGASGAPGARGDRGD 66
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 260 GEEGDKGEIGPPGETG 213
G +G KGE GPPG +G
Sbjct: 41 GLQGPKGERGPPGASG 56
>SB_10146| Best HMM Match : Collagen (HMM E-Value=0.09)
Length = 536
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGD 114
+G KG G PG +G PG +G RGD
Sbjct: 191 QGPKGERGPPGASGAPGARGDRGD 214
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 260 GEEGDKGEIGPPGETG 213
G +G KGE GPPG +G
Sbjct: 189 GLQGPKGERGPPGASG 204
>SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1357
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGE 210
G+ GD G G+EGD G+ G G+ G+
Sbjct: 818 GDDGDEGDDGDEGDNGDEGDDGDEGD 843
Score = 29.9 bits (64), Expect = 0.81
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLID 198
G++GD G G+ GD+G+ G G+ G + D
Sbjct: 821 GDEGDDGDEGDNGDEGDDGDEGDDGSTSDD 850
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDG 195
+GD G G++GD+G+ G G+ G+ DG
Sbjct: 817 EGDDGDEGDDGDEGDNGDEGDDGDEGDDG 845
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
G++GD G G++GD+G+ G + + + DG
Sbjct: 827 GDEGDNGDEGDDGDEGDDGSTSDDRDEVDDG 857
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 31.1 bits (67), Expect = 0.35
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = -1
Query: 245 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 81
+G +GP G G G +G G G NG G +G G GS G PG G
Sbjct: 418 EGPMGPRGYNGSI--------GPQGLAGAEGHNGTQGIQGPMGVNGSAGVPGPPG 464
>SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 30.7 bits (66), Expect = 0.46
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGE-IGPPGETGESLIDGIYAKGEKGY 168
+G+P G IP + G G+ G G IG + GI A
Sbjct: 356 NGIPNGIGTVNAIPNSMAAQMNGIAGMNGIGNGMGNGIGIMNGNMNGMA-GISALANLSC 414
Query: 167 PGYPGFNGVPGRKGIR---GDQGSDGYP 93
GFNG+ G GI G G+ GYP
Sbjct: 415 QAMNGFNGLNGMNGIHQINGQVGNTGYP 442
>SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022)
Length = 94
Score = 30.7 bits (66), Expect = 0.46
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 99
GP G G + G KG++G G G G G +G +GDQG G
Sbjct: 38 GPMGPRGYNGSQG--PKGDQGVQGPIGPQGYNGTQGPKGDQGVKG 80
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 266 LTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 114
+ G G +G G G G+ + G G +GY G G G G KG+ GD
Sbjct: 36 MEGPMGPRGYNGSQGPKGDQGVQGPI--GPQGYNGTQGPKGDQGVKGV-GD 83
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 30.7 bits (66), Expect = 0.46
Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 13/112 (11%)
Frame = -1
Query: 368 PPSRLVLSDGVPGWP--GATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGET--GESLI 201
PP + G PG G P G G G + G PG + G+
Sbjct: 112 PPGHPPMGGGYPGQQPGGPPPSYDSTMQQGGSYPPGQQPYPGQQAYPGQPGASPQGQPYP 171
Query: 200 DGIYAKGEKGYP---GYPG-----FNG-VPGRKGIRGDQGSDGYPGMGGDIG 72
Y +G++ YP GYP +G PG+ G+ G G P MGG G
Sbjct: 172 GQSYPQGQEPYPEKGGYPPAGVGQHSGPYPGQPGMWGPPPMGGPPPMGGPPG 223
>SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 30.7 bits (66), Expect = 0.46
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 251 GDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 75
G +G+ G G++ + G+ K G GVPG K + G +G++ PGM G+
Sbjct: 1448 GVRGDACVTGVRGDACVPGVRVNKCVPEVRGDQCVPGVPGNKCVPGVRGAECLPGMRGNN 1507
Query: 74 G 72
G
Sbjct: 1508 G 1508
>SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035)
Length = 453
Score = 30.7 bits (66), Expect = 0.46
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
+G +G G G NG G G +G QG +G PG
Sbjct: 225 RGPQGIQGPMGMNGSKGVPGPQGPQGLEGPPG 256
>SB_33814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 30.7 bits (66), Expect = 0.46
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Frame = -1
Query: 344 DGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGE-IGPPGETGESLIDGIYAKGEKGY 168
+G+P G IP + G G+ G G IG + GI A
Sbjct: 45 NGIPNGIGTVNAIPNSMAAQMNGIAGMNGIGNGMGNGIGIMNGNMNGMA-GISALANLSC 103
Query: 167 PGYPGFNGVPGRKGIR---GDQGSDGYP 93
GFNG+ G GI G G+ GYP
Sbjct: 104 QAMNGFNGLNGMNGIHQINGQVGNTGYP 131
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 30.3 bits (65), Expect = 0.61
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Frame = -1
Query: 374 PGPPSRLVL--SDGVPGWPGATPDIPMAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLI 201
P PP V + G+ PG +PM+ G +G + ++G G+ PP T + +
Sbjct: 618 PRPPGDGVAGPAQGMQRMPGP---MPMSGHLGPQGPP-VVYQKGPTGQ--PPVATSGAQM 671
Query: 200 DGIYAKGEKGYPGYPGFNGVP-GRKG-IRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGF 27
G + P +P G +G +R GS YPG G G QGP G K
Sbjct: 672 AG--PEASLNVPSSQSSQRLPQGMEGAVRLQMGSPSYPGQFGPQGGVPPRLQGPMGMKVG 729
Query: 26 SGEKE 12
G E
Sbjct: 730 VGSTE 734
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 30.3 bits (65), Expect = 0.61
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 191 YAKGEKGYPGYPG-FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 30
Y +G +G GY G +N ++G G++ GY G GG G G +G G+ G
Sbjct: 727 YQRGGRGGGGYGGGYNDRRMQQGGYGNRSGGGYRG-GGGYGGGGGGYRGGGGYGG 780
>SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013)
Length = 496
Score = 30.3 bits (65), Expect = 0.61
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 233 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 108
GP G G + G KG++G G G G G +G +GDQG
Sbjct: 365 GPMGPRGYNGSQG--PKGDQGVQGPVGPQGYNGTQGSKGDQG 404
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 84
G +G G G G G +G G QGS G G+G
Sbjct: 374 GSQGPKGDQGVQGPVGPQGYNGTQGSKGDQGVG 406
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 164 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT 60
G G G G +G +GDQG G G G G QG+
Sbjct: 365 GPMGPRGYNGSQGPKGDQGVQGPVGPQGYNGTQGS 399
>SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 29.9 bits (64), Expect = 0.81
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
G PG G G PG KG RG G G G G G
Sbjct: 1 GIPGRAGDAGKPGEKGSRGPPGPAGPIGNPGKPG 34
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETG 213
G GD G GE+G +G GP G G
Sbjct: 4 GRAGDAGKPGEKGSRGPPGPAGPIG 28
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETG 213
G G G G+ G+KG GPPG G
Sbjct: 1 GIPGRAGDAGKPGEKGSRGPPGPAG 25
>SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01)
Length = 738
Score = 29.9 bits (64), Expect = 0.81
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -1
Query: 209 SLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
+L + I A EK G PG NG G G GD G G G G G
Sbjct: 590 TLNEQIKALSEK--EGLPGVNGTSGPPGPPGDMGPPGLNGTRGPPG 633
>SB_4609| Best HMM Match : EGF (HMM E-Value=8.9e-07)
Length = 287
Score = 29.9 bits (64), Expect = 0.81
Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Frame = -1
Query: 278 GDMGLTGEEGDKGEIGPPGETGESLIDG-----IYAKGEKGYPGYPGFNGVPGRKGIRGD 114
G+ G G G G T +S + G Y G+ G G G G+ + G
Sbjct: 189 GNSGYGGAAWPGGTAGNGATTADSNVSGGGGGGFYTDGQ-GSRNKGGSGGEGGKAFLHGG 247
Query: 113 QG-----SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 21
G S+ Y G GG G G + G G G+SG
Sbjct: 248 VGGRQFSSNSYGGFGGGGGACGCNGGGAGGGGGYSG 283
>SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56)
Length = 697
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 155 GFNGVPGRKGIRGDQGSDGYPGMGG 81
G NG+ G G+RG G +G GM G
Sbjct: 516 GLNGIGGMNGMRGIGGMNGMDGMRG 540
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 173 GYPGYPGFNGVPGRKG 126
G PG+PGFNG PGR G
Sbjct: 239 GMPGFPGFNG-PGRIG 253
>SB_38267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 263 TGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGV 141
T E D + P G+ G GI KG +G+ Y GF V
Sbjct: 180 TMETKDGFNVVPDGDNGAKARIGIVGKGAQGWDSYIGFGTV 220
>SB_57480| Best HMM Match : MFS_1 (HMM E-Value=0.0025)
Length = 930
Score = 28.7 bits (61), Expect = 1.9
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -1
Query: 284 EKGDMGLTG-EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG--IRGD 114
E+G+ + G +E D+ I P E GE+ I G +GE G P G G +G+
Sbjct: 607 EQGEATIVGPDEPDEATIVGPDEQGEATIVGPDEQGEATIVG-PDEQGEATIVGPNEQGE 665
Query: 113 QGSDGYPGMGGDIGIQGTSQQGPKGFKG 30
+G P G+ I G ++QG +G
Sbjct: 666 ATIEG-PDEQGEATIVGPNEQGEATIEG 692
Score = 27.9 bits (59), Expect = 3.3
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = -1
Query: 284 EKGDMGLTG--EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG--IRG 117
E+G+ + G E+G+ +GP E GE+ I+G +GE G P G G +G
Sbjct: 662 EQGEATIEGPDEQGEATIVGP-NEQGEATIEGPEEQGEATIVG-PNEQGEATIVGPDEQG 719
Query: 116 DQGSDGYPGMGGDIGIQGTSQQG 48
+ +G P G+ I G +QG
Sbjct: 720 EATIEG-PDEQGEATIVGPDEQG 741
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.7 bits (61), Expect = 1.9
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = -2
Query: 262 LAKKEIREKLAHLEKLENH*LMAFMLKEKKDIQDTLASMVYPGEK--VFEGIRVQMGTQV 89
LA+K R+KL ++ + + ++++KK++QD V EK + EGIR + G +
Sbjct: 4300 LAEKR-RKKLEAQKRKQEREMTREVMEQKKELQDIRTEHVKEAEKQAMIEGIR-ENGVEA 4357
Query: 88 WEVILEYRVHHNKDQRASKDL 26
E ++ +V + + KDL
Sbjct: 4358 AEFVIR-KVLDKRQGQELKDL 4377
>SB_28449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -2
Query: 184 KEKKDIQDTLASMVYPGEKVFEGIRVQMGTQVWEVILEYRVHHNKDQRASKDLVEKKKK 8
+EK ++ S +Y GE+VF+GI + +G + LE RV D K +K
Sbjct: 59 EEKSEVFLRALSNIY-GEEVFDGINLDLGFADDSLALERRVDIGNDTTTDNKKEPKSEK 116
>SB_46911| Best HMM Match : MSSP (HMM E-Value=4.4)
Length = 424
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGP 45
+ E PGY GF V ++ + DQ PGM GD + + +GP
Sbjct: 212 RSEPDNPGYSGFQNVAMQENVNQDQ--HVIPGM-GDYKVAPSDNRGP 255
>SB_27528| Best HMM Match : Epimerase (HMM E-Value=3.2e-06)
Length = 441
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -2
Query: 184 KEKKDIQDTLASMVYPGEKVFEGIRVQMGTQVWEVILEYRVHHNKDQRASKDLVEKKKK 8
+EK ++ S +Y GE+VF+GI + +G + LE RV D K +K
Sbjct: 360 EEKSEVFLRALSNIY-GEEVFDGINLDLGFADDSLALERRVDIGNDTTTDNKKEPKSEK 417
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPPGETGES--LIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQ 111
E G+ TGE G E G ETGE+ + A GE G G G +
Sbjct: 31 EAGEASETGEAGKASEAGEASETGEASEASETGEATGEAGEASETGEASEASEAGEASET 90
Query: 110 GSDGYPGMGGDIG 72
G G + G
Sbjct: 91 GEAGKASEASETG 103
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 287 GEKGDMGLTGEEGDKGEIGPPGETGES 207
GE G+ TGE + E G ETGE+
Sbjct: 67 GEAGEASETGEASEASEAGEASETGEA 93
>SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59)
Length = 487
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 302 MAFLFGEKGDMGLTGEEGDKGEIGPPGETGESLIDG 195
M F G KGD G G++G G GP G E G
Sbjct: 84 MTFKQGLKGDPGRDGKDGKVGPQGPQGLRDEPFAYG 119
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 200 DGIYAKGEKGYPGYPGFNGVPGRKGIR--GDQGSDGYPGMGGDIGIQ 66
DG G+ GY G G G G GI GD G DG GGD G+Q
Sbjct: 1200 DGSDDGGDGGYGGSDG-GGDGGYGGIDSGGDGGCDGGIDGGGDGGLQ 1245
>SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 284 EKGDMGLTGEEGDKGEIGPPGETGES 207
E G+ GE + GE+G GE GE+
Sbjct: 51 EAGEASEAGEASEAGEVGEAGEAGEA 76
>SB_12996| Best HMM Match : PHZA_PHZB (HMM E-Value=8.6)
Length = 455
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 294 KSHRNIRS--SSGPSRYSIREN*SRGGARYPIRPI 392
++ R +RS G SRY R SRG R P RP+
Sbjct: 296 EAERELRSLWRGGASRYQCRRKNSRGEGRSPDRPV 330
>SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 204
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
+G G PG G G+ G G G QGS G G
Sbjct: 171 QGPMGAPGVQGIQGMRGPPGPPGPQGSLGPAG 202
>SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 186
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 185 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 90
+G G PG G G+ G G G QGS G G
Sbjct: 153 QGPMGAPGVQGIQGMRGPPGPPGPQGSLGPAG 184
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -2
Query: 172 DIQDTLASMVYPGEKVFEGIRVQMGTQVWEVILEYRVHH 56
D++ + GE +EG ++G QVW ++ +++V H
Sbjct: 345 DLEKNVKKESAEGEPAWEGAGKEVGVQVWRIV-KFKVTH 382
>SB_44152| Best HMM Match : CRAM_rpt (HMM E-Value=0.021)
Length = 697
Score = 27.9 bits (59), Expect = 3.3
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
+GD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 219 EGDID-TPDVNVKGDIDTPDVNVKGDIDGPDA--DINGPGWK-FKG-PKMPKFKGP--SF 271
Query: 101 GYPGMGGDIGIQGTSQQGPK 42
G G GDI ++G +GPK
Sbjct: 272 GGKGKSGDIEVEGPGFKGPK 291
Score = 26.2 bits (55), Expect = 10.0
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
KGD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 52 KGDIDTT-DINLKGDIDTPDVNVKGDIDGPDA--DVHGPGWK-FKG-PKMPKFKGP--SF 104
Query: 101 GYPGMGGDIGIQGTSQQGPK 42
G G GDI G GPK
Sbjct: 105 GGKGKSGDIDYDGPDFDGPK 124
>SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11)
Length = 2297
Score = 27.9 bits (59), Expect = 3.3
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
+GD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 896 EGDID-TPDVNVKGDIDTPDVNVKGDIDGPDA--DINGPGWK-FKG-PKMPKFKGP--SF 948
Query: 101 GYPGMGGDIGIQGTSQQGPK 42
G G GDI ++G +GPK
Sbjct: 949 GGKGKSGDIEVEGPGFKGPK 968
>SB_56576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 299 AFLFGEKGDMGLTGEEGDKGEIG 231
A L G+KGD G G++GD+G G
Sbjct: 101 ASLQGQKGDKGDKGDKGDQGAQG 123
>SB_55803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 210 FSSFSRWANFSLISFFAS*THISFFTEKKSHRNIRSSSG 326
FSSFS N++ ++ ++ T + F+ +K H N+ ++ G
Sbjct: 147 FSSFSFMWNWAKLTTWSVGTDLRFYRKKHGHYNLHNNIG 185
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 401 TTHYRANWVPGPPSRLVLSDGVPGWPGATPDIP 303
TTHYRANW + + PG + PD P
Sbjct: 17 TTHYRANWSSTAVAAALELVDPPGCRNSMPDRP 49
>SB_583| Best HMM Match : Collagen (HMM E-Value=0.0088)
Length = 69
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 72
G+ G G G +G G GD G DG G GD G
Sbjct: 28 GDDGDDGDDGDDGEDDDDGEDGDDGDDGDDGDDGDDG 64
Score = 26.6 bits (56), Expect = 7.6
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -1
Query: 257 EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
++GD G+ G G+ G+ GE G G +G G G GD G D
Sbjct: 23 DDGDDGDDGDDGDDGDD--------GEDDDDGEDGDDGDDGDDGDDGDDGDD 66
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 182 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 78
G+ G G G + G G GD G DG G GD
Sbjct: 31 GDDGDDGDDGEDDDDGEDGDDGDDGDDGDDGDDGD 65
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 121 RIPFLPGTPLKPGYPGYPFSP 183
R P PG P PG+P P SP
Sbjct: 142 RSPVSPGIPRSPGFPKSPRSP 162
>SB_23149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.5 bits (58), Expect = 4.3
Identities = 31/92 (33%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = -1
Query: 293 LFGEKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 114
L G KG G T G G GET + + Y KG G PG G +G G
Sbjct: 231 LEGYKGGQGGTSSGGG----GYGGET-YACLSSTYGKG--GDRNQPGNAGGGAGEGSTGG 283
Query: 113 QGSDGYPGMGGDIGIQGTSQQGPKGFKG-FSG 21
G G GGD G G G FSG
Sbjct: 284 PGGINAGGGGGDSTTDSDDGAGGGGGGGHFSG 315
>SB_43153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Frame = -1
Query: 170 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI-----GIQGTSQQGPKGFKGFSG 21
+ G+ GF G GS PG+ ++ G G GF GFSG
Sbjct: 6 FQGFTGFKGFSSTSSADVFGGSKTLPGISSNLNPKPTGFSGFGCNSTAGFSGFSG 60
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 27.1 bits (57), Expect = 5.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 133 LPGTPLKPGYPGYPFSP 183
+PG P+ P YPG P P
Sbjct: 56 VPGMPMPPAYPGMPTYP 72
>SB_45669| Best HMM Match : RVT_1 (HMM E-Value=0.14)
Length = 682
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = -2
Query: 226 LEKLENH*LMAFMLKEKKDIQDTLASMVYPGEKVFEGIRVQMGTQVWEVILEYRVHHNKD 47
L K H K+K + +++ + Y K ++ + GTQ E ILE+ + D
Sbjct: 206 LPKKNKHHARYTFNKQKMETNESIVT--YAARKRYQAKECEFGTQDDERILEHLIQTISD 263
Query: 46 QRASKDLVEKKK 11
K +EK++
Sbjct: 264 GDLVKRAIEKRR 275
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 292 RKAIGISGVAPGHPGTPSERTSLEGGPG 375
++AIGIS G PG P +R + PG
Sbjct: 1798 KQAIGISISVTGQPGYPVQRPEISPPPG 1825
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 292 RKAIGISGVAPGHPGTPSER 351
++AIGIS A G PG P +R
Sbjct: 1498 KQAIGISSSATGQPGYPVQR 1517
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 292 RKAIGISGVAPGHPGTPSER 351
++AIGIS A G PG P +R
Sbjct: 1621 KQAIGISSSATGQPGYPVQR 1640
>SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18)
Length = 283
Score = 27.1 bits (57), Expect = 5.7
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Frame = -1
Query: 287 GEKGDMGLTGEEG--------DKGEIGPPGETGESLI--DGIYAKGEKGYPGYPGFNGVP 138
G GD G+ ++G + G G G ++ DG++ G G +GV
Sbjct: 15 GGVGDDGVVNDDGGVNDDSVVNDGVFGDDGVVNYGVVGDDGVFGDNGVVNDGVVGDDGVV 74
Query: 137 GRKGIRGDQGSDGYPGMGGDIGIQG 63
G+ D G G G+ D G+ G
Sbjct: 75 NDDGVIDDDGVVGNDGVVNDDGLVG 99
>SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0)
Length = 808
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -1
Query: 173 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 63
GY PG++ VPG G GY G + G
Sbjct: 700 GYDWVPGYDWVPGYDWFSGSDWVSGYDWFSGSDWVSG 736
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 69 YSNITSHTWVPI*TLIPSNTFSPGYTIEARVSWIS 173
Y ++ H WVP +P + PGY W S
Sbjct: 683 YDWVSGHDWVPGYDWVPGYDWVPGYDWVPGYDWFS 717
>SB_57619| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 616
Score = 26.6 bits (56), Expect = 7.6
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Frame = -1
Query: 248 DKGEIGPPGETGESLIDGIYAKGEKGYPGYP---GFNGVPGR------KGIRGDQGSDGY 96
DKG++ PG S+ DG+ KG G G+ G KGI+G+ G
Sbjct: 21 DKGKLTCPGRLVTSMKDGVLVFDPKGIEGEVLVFDLKGIEGEVLVFDLKGIKGEVLVFGL 80
Query: 95 PGMGGDI---GIQGTSQQ 51
G+ G + ++GT+ Q
Sbjct: 81 KGIKGKVLVFDLKGTNVQ 98
>SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017)
Length = 723
Score = 26.6 bits (56), Expect = 7.6
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = -1
Query: 257 EEGDKGEIGPPGETGESLIDGIYA--KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 84
EE K + P E + D A K EK G G G G G G GY G+G
Sbjct: 311 EEKPKAKRDAPETKTEKVADAPTAADKKEKSAKRCCGGCGC-GYGGWGGYGGLGGYGGLG 369
Query: 83 GDIGIQGTSQQGPKGFKG 30
G G G + G GF G
Sbjct: 370 GYGGFLGHAGFGGWGFPG 387
>SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 260 GEEGDKGEIGPPGETGESLIDGIYAKGEKG 171
G G +G++GP G+ G + DG+ +G KG
Sbjct: 351 GRPGPQGKMGPQGDPGPAGKDGL--RGPKG 378
>SB_40832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1496
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 158 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 39
PGF VP K D G DG G D G G G
Sbjct: 1399 PGFYDVPREKENVSDGGDDGNGGGDDDDDYDGCGDDGGDG 1438
>SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19)
Length = 413
Score = 26.6 bits (56), Expect = 7.6
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 188 AKGEKGYPGY-PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGF 36
A+G PGY PG+ G P + G G P MG D G G S P +
Sbjct: 150 AQGPYQPPGYYPGY-GAPPQGNYAGGYTPGGQPSMGMDNG--GASYAPPPSY 198
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 127 PFLPGTPLKPGYPGYPFSPLA 189
P P TP+ PG P P +P A
Sbjct: 156 PSTPSTPITPGTPSTPSTPSA 176
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 127 PFLPGTPLKPGYPGYPFSP 183
P P TP PG PG P +P
Sbjct: 500 PSTPSTPSAPGTPGTPSTP 518
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 127 PFLPGTPLKPGYPGYPFSPLA 189
P P TP+ PG P P +P A
Sbjct: 706 PSTPSTPITPGTPSTPSTPSA 726
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 127 PFLPGTPLKPGYPGYPFSPL 186
P +P TPL PG P P +PL
Sbjct: 206 PPMPETPLPPGSPHIPPAPL 225
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 117 PSNTFSPGYTIEARVSWIS 173
PSN SPG + AR+SW++
Sbjct: 1243 PSNRKSPGSSPGARISWVT 1261
>SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 125 IRGDQGSDGYPGMGGDIGIQGTSQQGPKG 39
+ GD G DG G+GGD G G + G
Sbjct: 18 VDGDCGGDGGDGVGGDGGCCGDGEGNGDG 46
>SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 374 PGPPSRLVLSDGVPGWPGATPDI 306
P PP RL L + PG P P I
Sbjct: 863 PDPPQRLPLVEACPGSPSVKPAI 885
>SB_35485| Best HMM Match : CRAM_rpt (HMM E-Value=1)
Length = 178
Score = 26.2 bits (55), Expect = 10.0
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = -1
Query: 281 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 102
KGD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 82 KGDIDTT-DINLKGDIDTPDVNVKGDIDGPDA--DVHGPGWK-FKG-PKMPKFKGP--SF 134
Query: 101 GYPGMGGDIGIQGTSQQGPK 42
G G GDI G GPK
Sbjct: 135 GGKGKSGDIDYDGPDFDGPK 154
>SB_24324| Best HMM Match : PDZ (HMM E-Value=0.013)
Length = 406
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 289 KRKAIGISGVAPGHPGTPSERT 354
++ I I G A GHPG P ++T
Sbjct: 145 EKLGISIRGGAKGHPGNPLDKT 166
>SB_3202| Best HMM Match : AFP (HMM E-Value=2.9)
Length = 460
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 176 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ-QGPKGFKGFS 24
+G+ GFN + G ++G G+ + G I +QG ++ QG +GF+
Sbjct: 308 QGFNELQGFNELQGFNELQGFNELQGFNELQGFIELQGFNELQGFNELQGFN 359
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -1
Query: 137 GRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 9
G G GD G DG G GD G G G G+ ++
Sbjct: 1034 GDDGDDGDDGDDGDDGDDGDDDDDDDDDDGDDGDDGDDGDDDD 1076
>SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 122 RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 6
R + SDG GG++ +G Q +G KG EKE K
Sbjct: 305 RDSKRSDG----GGEMRTKGDCQGSNRGVKGGQSEKESK 339
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,762,532
Number of Sequences: 59808
Number of extensions: 305374
Number of successful extensions: 3310
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1886
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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