Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32024
(401 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 29 0.015
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 3.0
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 5.3
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 5.3
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 5.3
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 5.3
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 6.9
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 6.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 6.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 6.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 9.2
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 29.5 bits (63), Expect = 0.015
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Frame = -1
Query: 188 AKGEKGYPGYPGFNGVPGRKGIRGDQ-GSDGYPGMGGDIGIQGTS----QQGPKGF-KGF 27
A+ EK P NG PG GIR DQ G P + G+S P G+ K
Sbjct: 272 AQKEKDKPNSTTMNGSPGSGGIRSDQMGVKIEPAEAESLSTSGSSGILTPVSPYGYVKPI 331
Query: 26 SGEKEE 9
S E+EE
Sbjct: 332 SPEQEE 337
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 294 KSHRNIRSSSGPSRYS 341
+ RN+R S P+RYS
Sbjct: 908 RPERNVRQSMMPTRYS 923
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 73 EYRVHHNKDQRASKDLVEKKKKK 5
EYR + + S+D E++K K
Sbjct: 55 EYRKYRETSKERSRDRKEREKSK 77
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 73 EYRVHHNKDQRASKDLVEKKKKK 5
EYR + + S+D E++K K
Sbjct: 55 EYRKYRETSKERSRDRKEREKSK 77
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 73 EYRVHHNKDQRASKDLVEKKKKK 5
EYR + + S+D E++K K
Sbjct: 55 EYRKYRETSKERSRDRKEREKSK 77
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.0 bits (42), Expect = 5.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 298 LFFSVKKEIWV*LAKKEIREKLAHLEKLEN 209
L ++KKEI+ L + ++ E L + L+N
Sbjct: 565 LIDNIKKEIYDILPEVDVEEILGEAKVLQN 594
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -2
Query: 73 EYRVHHNKDQRASKDLVEKKKKK 5
EYR + + + S+D E+++ K
Sbjct: 55 EYRKYRERSKERSRDKRERERSK 77
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -2
Query: 73 EYRVHHNKDQRASKDLVEKKKKK 5
EYR + + + S+D E+++ K
Sbjct: 55 EYRKYRERSKERSRDKRERERSK 77
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/23 (26%), Positives = 14/23 (60%)
Frame = -2
Query: 73 EYRVHHNKDQRASKDLVEKKKKK 5
EYR + + + S+D E+++ +
Sbjct: 288 EYRKYRERSKERSRDRTERERSR 310
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = -2
Query: 247 IREKLAHLEKLENH*LMAFMLKEKKDIQDTLASMVYP 137
+REKL+ + ++ +M + T+A ++YP
Sbjct: 810 VREKLSSSQPMQPPQQNPYMFLPVSYMSTTMAGVIYP 846
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 9.2
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -2
Query: 73 EYRVHHNKDQRASKDLVEKKKKK 5
EYR + + S+D +E+++ K
Sbjct: 277 EYRKYGKTSKERSRDRMERERSK 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,575
Number of Sequences: 438
Number of extensions: 2764
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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