Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32022
         (466 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    54   5e-10
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    44   5e-07
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   9.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 54.4 bits (125), Expect = 5e-10
 Identities = 25/70 (35%), Positives = 40/70 (57%)
 Frame = +2

Query: 155 AVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLPAPYEIYP 334
           A K+ R+   A+  D  +  A + R+R+N  +F YAF+ A  HR D + L LP+   ++P
Sbjct: 91  AGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLHRPDTQNLDLPSFIHVFP 150

Query: 335 YXFVDSHVIS 364
             +VDS V +
Sbjct: 151 DKYVDSQVFA 160


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 20/59 (33%), Positives = 34/59 (57%)
 Frame = +2

Query: 188 KDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLPAPYEIYPYXFVDSHVIS 364
           ++ D  +  A + R+R+N  +F YA + A  HR D + + LP+  E +P  +VDS V +
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFA 160



 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 415 PEDRVLGGFSHLHHKGFTDDMAVN 344
           P   V   F+HL H+ FT  + VN
Sbjct: 466 PRGSVFVRFTHLQHQPFTYKITVN 489


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 256 DEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 149
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 35  LRQVHECRCR 64
           LRQV  CRC+
Sbjct: 171 LRQVFTCRCK 180


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 394 RQGPGPLEILRH 429
           R+GPGP    RH
Sbjct: 329 RRGPGPARSRRH 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,243
Number of Sequences: 336
Number of extensions: 1871
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)