Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32022
         (466 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548...    29   1.4  
01_07_0321 + 42715969-42716233,42716320-42716399,42716545-427166...    29   1.4  
06_01_0769 - 5745324-5746970                                           27   7.4  
02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145...    27   7.4  
07_01_0359 - 2633735-2634115,2634345-2634600,2634708-2635552,263...    27   9.8  
01_06_0290 + 28235024-28235037,28235160-28235643                       27   9.8  

>10_08_0960 -
           21853010-21853282,21854078-21854449,21854555-21854862,
           21854946-21855102
          Length = 369

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = -1

Query: 310 QVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELVG 131
           Q++  A  + +ARGSKS ++  +++P +  A            VE+     G       G
Sbjct: 234 QLQQAAAAAAQARGSKSPEDDDNINPNAAAADDAESGFVDPDRVEEQRINSG-------G 286

Query: 130 VDEGLLPRGSMP 95
           V+E LL RG  P
Sbjct: 287 VEEALLGRGVRP 298


>01_07_0321 +
           42715969-42716233,42716320-42716399,42716545-42716613,
           42716710-42716791,42716902-42716996,42717129-42717203,
           42717385-42717436,42717442-42717630,42717667-42717752,
           42717827-42717902,42718001-42718164,42718307-42718426
          Length = 450

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -1

Query: 307 VETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFD-GFFHLELVG 131
           VE ++  S++  G   +D   +  P       PH    +LSV++ S +F    F    V 
Sbjct: 61  VEVVSADSMQVYGG--LDVLTNKVPLHEQKGVPHH---LLSVIDPSVEFTCRDFRDHAVP 115

Query: 130 VDEGLLPRGSMPILI 86
           + EG+L RG +P+++
Sbjct: 116 IIEGILDRGGLPVIV 130


>06_01_0769 - 5745324-5746970
          Length = 548

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 230 ERINGGMFVYAFT-AACFHRTDCKGLYLPAPYEIYPY 337
           +R+ GG+    F  A+C  R +    + P+P+ + PY
Sbjct: 75  DRLLGGLLSPEFDEASCLSRYEASSRWKPSPFRVSPY 111


>02_01_0223 +
           1453478-1453750,1455788-1456018,1456066-1456200,
           1457918-1457971,1458417-1458482,1458593-1458679,
           1459338-1459394,1459470-1459500,1459577-1459634,
           1459710-1459761,1459881-1459917,1460008-1460210,
           1460556-1460633,1460683-1460853,1461126-1461239
          Length = 548

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -1

Query: 385 HLHHKGFTDDMAVNEXVGIDLVRSGQVETLAVGSVEARG 269
           H HH G   D A    V  D V +      A G+V+ RG
Sbjct: 24  HHHHDGAAGDSAAAAEVPQDKVVAAAAAAAAAGNVQRRG 62


>07_01_0359 -
           2633735-2634115,2634345-2634600,2634708-2635552,
           2635681-2635956,2636778-2636941,2637924-2638197
          Length = 731

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 408 TGSLAALVIFIIKALLMTWLST 343
           T  L + VIF++  L+ TWLS+
Sbjct: 8   TSLLTSFVIFVVLVLVFTWLSS 29


>01_06_0290 + 28235024-28235037,28235160-28235643
          Length = 165

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = +2

Query: 182 YAKDFDVFMRTACWM--RERINGGMFVYAFTAACFHRTDCK 298
           Y+K FD F    CW+  +ER N  +F   F  A     D K
Sbjct: 110 YSKAFDTFFMLVCWLVWKER-NARVFDQKFNTADLLSADIK 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,927,405
Number of Sequences: 37544
Number of extensions: 215621
Number of successful extensions: 511
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)