Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32022
         (466 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   0.94 
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   1.6  
AL132949-25|CAB61103.1|  209|Caenorhabditis elegans Hypothetical...    27   5.0  
U39646-2|AAA80368.2|  223|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical...    27   8.8  
AL032624-2|CAA21520.2|  447|Caenorhabditis elegans Hypothetical ...    27   8.8  

>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 29.9 bits (64), Expect = 0.94
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 237 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTXSLTAMSSVKPL 374
           + EA SST LL   ST  TA +S T   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 217 RSPHENIEVLSVVEDSEDFD 158
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>AL132949-25|CAB61103.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.29 protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -1

Query: 313 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 149
           GQV  L+V   E   S ++  + + + F +  ++P E     ++V+  +DF G F
Sbjct: 51  GQVPVLSVDGFEIPQSAAIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKDFMGSF 104


>U39646-2|AAA80368.2|  223|Caenorhabditis elegans Hypothetical
           protein F47B7.4 protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +3

Query: 192 TSMFS*GLRAG*EKGSTEACSSTLLLPRASTEPTARVSTCPLLTRSIPTXSLTAMS 359
           T+M   G+        TEA   T++   A+   T    TCP  T   P  S  A++
Sbjct: 61  TTMAPGGVSTPETSEETEAPEVTMMTTMATESSTVTEETCPTSTTKCPDLSTIALA 116


>AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.31 protein.
          Length = 209

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -1

Query: 313 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 149
           GQV  L V   +   S ++  + + + F +  ++P E +   ++V+  +DF G F
Sbjct: 51  GQVPYLTVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQVWADAIVDQFKDFMGSF 104


>AL032624-2|CAA21520.2|  447|Caenorhabditis elegans Hypothetical
           protein Y49A10A.1 protein.
          Length = 447

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 71  VHGRMYKDGHAPAW*XT---FVHTNELQMEEAVKVFRVLYYAKDFDVFMRT 214
           +HGR+++    PA       +VH ++L +   + +F+ +Y     D F R+
Sbjct: 125 LHGRIFRRQKVPAHNRIGKPYVHWSDLNVGTDINLFQTIYRITSCDTFTRS 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,682,591
Number of Sequences: 27780
Number of extensions: 171048
Number of successful extensions: 398
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)