Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32020
         (323 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   1.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   3.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   3.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   3.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   3.2  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 251 IFYWTLRYEFVWDR 210
           ++YW  +YE  W R
Sbjct: 119 VYYWRQQYEDFWHR 132


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 60  RTSLRRVKENERLLXGKPRLPASTVNLKRQPAPPKAAHIVSGTEK 194
           R +  ++KE E     KPR    T   +R+P PP+   +    EK
Sbjct: 238 RLTDEQLKELENPPTPKPR---PTKVSRRKPRPPRPTQVEEEEEK 279


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 167 CPHRQWN*ETRLTCAYPIRIRSVKSNKIFLRTKKKKKNSRGG 292
           CP R+W+       A     R V  + +FL +     N+  G
Sbjct: 120 CPRREWSSPPDARAASDAARRGVLYSSVFLGSPGDASNASIG 161


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +1

Query: 148 SQLPLKLPTSSVELRNPSY 204
           S  P  LPT      NP+Y
Sbjct: 78  SSTPSSLPTQRTSTSNPTY 96


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 167 CPHRQWN*ETRLTCAYPIRIRSVKSNKIFLRTKKKKKNSRGG 292
           CP R+W+       A     R V  + +FL +     N+  G
Sbjct: 276 CPRREWSSPPDARAASDAARRGVLYSSVFLGSPGDASNASIG 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,698
Number of Sequences: 336
Number of extensions: 1155
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)