Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32020
         (323 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0006 + 17008799-17009417,17010035-17010162,17010425-170106...    31   0.16 
03_01_0290 + 2246791-2247027,2248089-2248346                           29   1.1  
10_08_0310 - 16669565-16669822,16670558-16670794                       28   1.9  
03_02_0955 - 12690405-12690842,12690940-12691130,12691208-126917...    27   3.4  
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853     27   4.5  
06_01_0186 + 1454533-1454710,1455299-1455420,1455508-1455806,145...    26   5.9  
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238...    26   7.8  
04_04_0332 + 24477289-24477339,24477602-24477877,24478565-244787...    26   7.8  
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411           26   7.8  

>01_05_0006 +
           17008799-17009417,17010035-17010162,17010425-17010650,
           17010792-17010925,17010988-17011161,17011234-17012238
          Length = 761

 Score = 31.5 bits (68), Expect = 0.16
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 39  QALQVQTRTSLRRVKENERLLXGKPRLPASTVNLKRQPAP--PKAAHIVSGTEKPVLLAP 212
           ++L VQ +  + R+  N RL     + PA+    +R PAP  P  + ++ G  K V   P
Sbjct: 9   RSLLVQAQYPISRLPSNLRLSLSHHKQPAAVAKRRRAPAPSHPAFSSVIRGRPKKV---P 65

Query: 213 IP 218
           IP
Sbjct: 66  IP 67


>03_01_0290 + 2246791-2247027,2248089-2248346
          Length = 164

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 1   IIPXRINIRVEHVKHSKCRQGL 66
           II  RI++RVEHV+ S+C + L
Sbjct: 84  IIRKRIHVRVEHVQPSRCTEEL 105


>10_08_0310 - 16669565-16669822,16670558-16670794
          Length = 164

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 1   IIPXRINIRVEHVKHSKCRQ 60
           II  RI++RVEHV+ S+C +
Sbjct: 84  IIRKRIHVRVEHVQPSRCTE 103


>03_02_0955 - 12690405-12690842,12690940-12691130,12691208-12691718,
            12692240-12693171,12693260-12693351,12693430-12693509,
            12693568-12693621,12693734-12693850,12693949-12694194,
            12694273-12694432,12694512-12694576,12694686-12694877,
            12694980-12695061,12695153-12695925
          Length = 1310

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 50   SADKDFLKESQRE*EATXRXAKAAGKYRQPEETASSP 160
            S  +DF  +S+ E E     A+AA     PEE A  P
Sbjct: 1217 SVARDFKIQSKDELERNSTAARAASSENMPEEDAEGP 1253


>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
          Length = 625

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 223 SYGIGASKTGFSVPLTMWAALGGAG 149
           S  + AS TGF VP+ +  A+G AG
Sbjct: 86  SISLPASPTGFGVPVALPIAVGDAG 110


>06_01_0186 +
           1454533-1454710,1455299-1455420,1455508-1455806,
           1455846-1455933,1456015-1456096,1457130-1457242
          Length = 293

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 114 RLPASTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEF 227
           +LP S       PAPP AA  V+   +P L  P P +F
Sbjct: 22  QLPLSAAPAAGMPAPPPAASQVAAAGQP-LKRPRPADF 58


>12_02_0233 -
           16023062-16023253,16023528-16023609,16023699-16023809,
           16023890-16024141,16024227-16024580,16024893-16025548,
           16025554-16026459,16026550-16026747
          Length = 916

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 111 PRLPASTVNLKRQPAPPKAAHIVSGTEKPVLLA 209
           PR P+S   L+      + AH++S ++K VL A
Sbjct: 577 PRHPSSPPPLRNSEKRKELAHVLSDSQKSVLAA 609


>04_04_0332 +
           24477289-24477339,24477602-24477877,24478565-24478702,
           24478799-24480343
          Length = 669

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 34  HVK-HSKCRQGLP*GESKRM 90
           HVK H+KC +G P G+S RM
Sbjct: 561 HVKKHTKCGRGKPHGKSLRM 580


>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
          Length = 885

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 72  RRVKENERLLXGKPRLPASTVNLKRQ-PAPPKAAH 173
           RR+    RL   +  LP S  +  R+ P+PP+A+H
Sbjct: 34  RRLARKRRLFSPRRLLPTSLRSSPRRLPSPPQASH 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,328,129
Number of Sequences: 37544
Number of extensions: 147853
Number of successful extensions: 463
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)