Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32018
(357 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 31 0.040
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.12
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 29 0.21
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 29 0.21
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 0.37
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 28 0.49
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 0.49
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 27 0.65
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 27 0.65
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 0.86
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 27 0.86
SPAC1687.13c |csn5||COP9/signalosome complex subunit Csn5|Schizo... 27 1.1
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 27 1.1
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 27 1.1
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 26 1.5
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 1.5
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 26 1.5
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 2.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 2.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 2.6
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 25 2.6
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 2.6
SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Ma... 25 2.6
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 25 3.5
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 25 3.5
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 4.6
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 4.6
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 4.6
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 25 4.6
SPBC23G7.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 4.6
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 25 4.6
SPBC2A9.08c |sec22||SNARE Sec22|Schizosaccharomyces pombe|chr 2|... 24 6.1
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 24 8.0
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 24 8.0
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 24 8.0
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 24 8.0
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 24 8.0
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 24 8.0
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 31.5 bits (68), Expect = 0.040
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 197 NEEVRELQKKLAQVEED---LILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
N+E+ E KKL + +++ L+ N L + D EEK Q+ A EV A N+++
Sbjct: 143 NDEINERLKKLTEEQQNVDMLVAKVNFLSKHLHDNEEKLMQVNAKMDEVLAENKRL 198
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.9 bits (64), Expect = 0.12
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 149 TCEQQARDANLRAEKVNEEVRELQKK---LAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
T +Q +D + + +++ E ++K L+ DL KLE++NK L +K++ + +
Sbjct: 627 TITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDVDS 686
Query: 320 TESEVXAL 343
E + L
Sbjct: 687 LEKNIQTL 694
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 29.1 bits (62), Expect = 0.21
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +2
Query: 161 QARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
Q ++A LRAE N +R Q + ++ LI NK++ ++ L++K K+LTA + V
Sbjct: 49 QEKNAELRAELDN--IRNAQAAIRSSKQTLI---NKVKAQDELLKKKVKELTAMKKTV 101
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 29.1 bits (62), Expect = 0.21
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 EEVRELQKKLAQVEEDLILNKNKLEQANKDLEE--KEKQLTATESEVXALNRKV 355
EE++ +KKL + E++ K K + LEE KE + TE+ V A N+ +
Sbjct: 94 EEIQGCEKKLESLYEEVAKAKAKAVEDQLALEEADKEAKKAKTEAPVEAANKSL 147
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.3 bits (60), Expect = 0.37
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +2
Query: 110 KLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKD 289
K ++G+ G ++ E++ + EK+N+ E K++ QVE D++LNK D
Sbjct: 503 KSLQGKTEGI-SNAIEEKQKAMAPALEKINQLTSE--KQILQVELDMLLNKE--NDLIND 557
Query: 290 LEEKEKQLTATESEVXALNRKV 355
+E + L ++ NR +
Sbjct: 558 VESSQSSLDKLRNDAEE-NRNI 578
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 0.49
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQ 310
++ R A A+ E+ +E QK Q E+D + +KN++++ K +E +++
Sbjct: 259 RRRRSAQNSAKLEKEKAKEKQKDKDQ-EQDTVSDKNQIDEIEKGQKEVDEE 308
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.9 bits (59), Expect = 0.49
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = +2
Query: 149 TCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATES 328
T E + R A L A + NEE+R L+ +L +K KLE + + E+ K + S
Sbjct: 1270 TFEDEKRKA-LIASRDNEELRSLKSELE--------SKRKLEVEYQKVLEEVKTTRSLRS 1320
Query: 329 EVXALNRKV 355
EV L KV
Sbjct: 1321 EVTLLRNKV 1329
Score = 24.6 bits (51), Expect = 4.6
Identities = 10/50 (20%), Positives = 28/50 (56%)
Frame = +2
Query: 179 LRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATES 328
L + + ++++++ ++ +++ +L +N + +DL E LTA E+
Sbjct: 817 LSSTQNDKQLKKRDAEIIELKYELKKQQNSKSEVERDLVETNNSLTAVEN 866
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 27.5 bits (58), Expect = 0.65
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 140 RADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQ 310
+ + + +A RAE +++E++ +L+ E++ K E A LEE E++
Sbjct: 7 KINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEE 63
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 27.5 bits (58), Expect = 0.65
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 74 HGTRSXKKMQAMKLVEGQCHGTRADTCEQQARDANLRAEKVNEEV 208
H + Q KLV+ T D C++ +DANL+ ++NE +
Sbjct: 338 HINMEISRAQFEKLVDPLVRRT-IDPCKRALKDANLQTSEINEVI 381
Score = 25.8 bits (54), Expect = 2.0
Identities = 13/63 (20%), Positives = 33/63 (52%)
Frame = +2
Query: 101 QAMKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQA 280
QA++ + + R + A D + +E + +++ E+Q+ +V E + N+N+ ++
Sbjct: 603 QAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYKNQNQGNES 662
Query: 281 NKD 289
+ D
Sbjct: 663 SGD 665
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 0.86
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +2
Query: 146 DTCEQQARDANLRAEKVNEEVRELQKKLAQVE---EDLILNKNKLEQANKDLEEKEKQLT 316
DT ++A + V E AQV EDLI NK + KD+ +K+
Sbjct: 642 DTARNALKEAKASRAMAEKMVIERDAMAAQVNLGAEDLIAKLNKEVEDQKDVILSQKRTN 701
Query: 317 AT-ESEVXALNR 349
T ++E+ AL +
Sbjct: 702 ETLKTEIDALQK 713
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 27.1 bits (57), Expect = 0.86
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 242 EDLILNKNKLEQANKDLEEKEKQLTATESEVXALNR 349
ED+I+ + E+ KD EKEK+ E E L+R
Sbjct: 424 EDIIIFVDPFEEWKKDEREKEKRKRQEEEEENNLDR 459
>SPAC1687.13c |csn5||COP9/signalosome complex subunit
Csn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 299
Score = 26.6 bits (56), Expect = 1.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 47 GTVTTKSRHHGTRSXKKMQAMKLVEGQCH 133
G++ TKSRHH + K + + K+ + H
Sbjct: 175 GSIRTKSRHHPSVLFKNLPSSKIEDAGAH 203
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.6 bits (56), Expect = 1.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 212 ELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
+L KK Q E+D+ +NKL + ++K K ++V A+N+K+
Sbjct: 517 QLAKKARQQEKDMAKLQNKLNMTGSEQQKKAK------AKVKAMNKKL 558
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 26.6 bits (56), Expect = 1.1
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +2
Query: 149 TCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATES 328
T E + A R + E ++ ++ Q +E L K KLE+ EEK+ +++ +
Sbjct: 18 TSELPVKKAFRRGDWEKEREKKYLQEKQQKDEQRELKKRKLEEERLKYEEKKLRISRLAN 77
Query: 329 EVXALNRKV 355
+ + N ++
Sbjct: 78 KESSRNEEL 86
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 1.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 260 KNKLEQANKDLEEKEKQLTATESE 331
K K+++ NK+LE+ E QLT S+
Sbjct: 228 KEKIDKLNKELEKVEPQLTFLRSK 251
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 26.2 bits (55), Expect = 1.5
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +2
Query: 98 MQAMKLVEGQC---HGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNK 268
M+ K VEG G + E+Q D V L ++ V+ ++
Sbjct: 1 MRPAKSVEGYIIIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEYAT 60
Query: 269 LEQANKDLEEKEKQLTATESEV 334
LEQA K ++EK L + EV
Sbjct: 61 LEQAQKAVDEKNLSLLDEKLEV 82
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.2 bits (55), Expect = 1.5
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 179 LRAEKVNEEVRELQKKLAQVEEDLILNKNK--LEQANKDLEEKEKQLTATESEV 334
LR+ +++ +L+ + +E+ +L+K L Q DL+ +E++L+A ESE+
Sbjct: 276 LRSPILSDIRSKLESERVVLEQSDLLHKKHQMLIQLENDLQFREQRLSARESEL 329
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 2.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 209 RELQKKLAQVEEDLILNKNKLEQANKDLE-EKEKQ 310
RE++ L + + DLI +KN+L QA E EK K+
Sbjct: 431 REMKAALEKQKADLIDHKNRLMQAKAAAENEKSKR 465
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 2.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 311 TASPSLQGPCWPAPVCSCSGSGLPPPGRASSGVXGLP 201
+ +P + P AP SG+PP + ++GV +P
Sbjct: 1156 SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.4 bits (53), Expect = 2.6
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 332 PRIRWRSTASPSLQGPCWPAPVCSCSGSGLPPPGRASSGVXGLPRLP 192
P +R +S A P + P P P S +PPP A G P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMS-----VPPPPSAPPMPAGPPSAP 1731
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 25.4 bits (53), Expect = 2.6
Identities = 23/88 (26%), Positives = 42/88 (47%)
Frame = +2
Query: 65 SRHHGTRSXKKMQAMKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEE 244
++ HG S + Q KL+EG T T ++ D V + +EL ++ + +E
Sbjct: 67 TQEHGASSEEVSQNSKLIEG---FTSPSTDDKPNND-------VEVDYQELLRQTLEADE 116
Query: 245 DLILNKNKLEQANKDLEEKEKQLTATES 328
D + + ++ +NK+ E K+ TES
Sbjct: 117 DASDSDDSVDSSNKNSEVSIKR-RKTES 143
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.4 bits (53), Expect = 2.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQ 310
EK E + ++ A++E + + EQA ++ EEK K+
Sbjct: 539 EKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKR 579
Score = 25.0 bits (52), Expect = 3.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 126 NAMGQGPTPANSRLETPTS 182
NA P+ NSR ETPT+
Sbjct: 494 NASSPNPSETNSRAETPTA 512
>SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 2.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQA 280
E + +E++E + LAQ EE++ K+KL+ A
Sbjct: 295 EPLKKELQETKTLLAQKEEEISNLKDKLQNA 325
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 25.0 bits (52), Expect = 3.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 239 PPGRASSGVXGLPRLPSQHGG 177
P G S G GL R+P+QH G
Sbjct: 608 PMGTDSFGNIGLTRVPTQHTG 628
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 25.0 bits (52), Expect = 3.5
Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 155 EQQARDANL-RAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
+ Q+++ ++ + EK+ +E+++ ++ E +L +N + N D EE + +L A + E
Sbjct: 117 KSQSKNVSIEKIEKLQDEIQDYMDAAGELNE--VLGQN-MTDINVDEEELDAELEALQQE 173
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 24.6 bits (51), Expect = 4.6
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEK----EKQLTAT 322
E D + + E ELQ+KLA+ E + +L K LEE+ +K++
Sbjct: 65 ENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQSTSYQKEIEEV 124
Query: 323 ESEVXALNRKV 355
+E A K+
Sbjct: 125 RNEKEATQVKI 135
Score = 23.8 bits (49), Expect = 8.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 176 NLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL 313
NL+ VN KLA +E L KN L++ + E ++ +L
Sbjct: 40 NLKKPSVNSANETKNPKLASLEFQLENLKNDLKRKELEFEREQIEL 85
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 24.6 bits (51), Expect = 4.6
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVR--ELQKKLAQVEEDLILNKNKLEQANKDLEEK 301
EQ+ + L +K E+ + E +KKL + +++ K EQ ++ EEK
Sbjct: 649 EQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEK 699
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 24.6 bits (51), Expect = 4.6
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 173 ANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRK 352
+NL+ E+ N+E+ L KKL + E IL+ N ++EE+ Q +L
Sbjct: 725 SNLK-ERHNDELDSLNKKLREFEG--ILSSN--SSLKSEIEERNNQYVTLRENFDSLQNA 779
Query: 353 V 355
+
Sbjct: 780 I 780
Score = 23.8 bits (49), Expect = 8.0
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 173 ANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
+ ++ ++ + E+ L K+L +EED +NKL + + E QL E+
Sbjct: 494 SRMKTQEQSIELTRLYKQLQDIEEDY---ENKLMRMEQQWREDVDQLQEYVEEI 544
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 24.6 bits (51), Expect = 4.6
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 179 LRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
L EK+ ++ +KLA + +L +++LE K +E +K L A
Sbjct: 674 LEKEKIKKKFDRENEKLAAEDPKSVLPESELEVRLKAADELKKALDA 720
>SPBC23G7.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 131
Score = 24.6 bits (51), Expect = 4.6
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 203 EVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL 313
E+RELQ++ E L+ + L++ +L +++QL
Sbjct: 28 EIRELQERNKNKYEQLLQARKDLDRFRSNLNVQQEQL 64
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 24.6 bits (51), Expect = 4.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 305 SPSLQGPCWPAPVCSCSGSGLPPP 234
+P + GP P P +G+G PPP
Sbjct: 755 APIMGGPPPPPPPPGVAGAGPPPP 778
>SPBC2A9.08c |sec22||SNARE Sec22|Schizosaccharomyces pombe|chr
2|||Manual
Length = 209
Score = 24.2 bits (50), Expect = 6.1
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 173 ANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQ 277
AN +K+N E++++ + + + EDL+ + LE+
Sbjct: 124 ANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEK 158
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 23.8 bits (49), Expect = 8.0
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 149 TCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILN---KNKLEQANKDLEEKE 304
T E ++A+L K N R++ KKL + E+D N K +EQ N KE
Sbjct: 54 TLEFVRQNADLSITKDN--FRDVYKKLTENEDDSFANQAEKPSMEQQNSKNSIKE 106
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 23.8 bits (49), Expect = 8.0
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEK 307
++A + E+ + R +Q+K A+VEE L + ++E L ++K
Sbjct: 166 EEASGTRMFEERKEKAFRTMQRKEAKVEEINTLLREEIEPRLTKLRTEKK 215
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 23.8 bits (49), Expect = 8.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 173 ANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEK 301
A LR E++ + ++QK+ E L+ L+ KDLEEK
Sbjct: 124 AKLREERLQQFDDDIQKR-----ESLLETYTLLDAQRKDLEEK 161
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 23.8 bits (49), Expect = 8.0
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 200 EEVRE-LQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRK 352
+E+ E L++ EED+I ++ + ++LEE+E++ E ++K
Sbjct: 51 QEIEEALEEDDTNYEEDIIDDEESAQVDEEELEEEEEEEEDATPEPVVTSKK 102
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 23.8 bits (49), Expect = 8.0
Identities = 9/35 (25%), Positives = 24/35 (68%)
Frame = +2
Query: 191 KVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLE 295
++ ++V LQK++A+ + L LNK + ++++++
Sbjct: 413 ELRQKVSILQKRIAEESKQLALNKEVRKISSREIK 447
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 23.8 bits (49), Expect = 8.0
Identities = 11/56 (19%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 83 RSXKKMQAMKLVEG-QCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEED 247
+ ++++ +K V G Q + R + + ++EK++E ++ ++++L ++EE+
Sbjct: 151 KDSERLELLKEVAGTQIYENRRAESNKIMDETIQKSEKIDELLQYIEERLRELEEE 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,128,304
Number of Sequences: 5004
Number of extensions: 20118
Number of successful extensions: 146
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 107972554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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