Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32018
(357 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 37 0.003
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 36 0.006
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 36 0.006
At2g38823.1 68415.m04770 expressed protein 36 0.006
At5g61070.1 68418.m07663 histone deacetylase family protein (HDA... 34 0.032
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 34 0.032
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 33 0.042
At1g47900.1 68414.m05334 expressed protein 33 0.056
At1g18410.1 68414.m02299 kinesin motor protein-related similar t... 33 0.056
At3g12360.1 68416.m01541 ankyrin repeat family protein contains ... 33 0.074
At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2 tr... 32 0.098
At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2 tr... 32 0.098
At5g60030.1 68418.m07527 expressed protein 32 0.13
At5g27330.1 68418.m03263 expressed protein 32 0.13
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 32 0.13
At3g58840.1 68416.m06558 expressed protein 32 0.13
At5g27220.1 68418.m03247 protein transport protein-related low s... 31 0.17
At2g28620.1 68415.m03479 kinesin motor protein-related 31 0.17
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 31 0.17
At5g26350.1 68418.m03150 hypothetical protein 31 0.23
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 31 0.23
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 31 0.23
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 0.23
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 31 0.30
At5g53620.2 68418.m06662 expressed protein 31 0.30
At5g53620.1 68418.m06661 expressed protein 31 0.30
At4g38910.1 68417.m05514 expressed protein 31 0.30
At4g32190.1 68417.m04581 centromeric protein-related low similar... 31 0.30
At2g44790.1 68415.m05574 uclacyanin II strong similarity to ucla... 31 0.30
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 31 0.30
At1g29570.1 68414.m03616 zinc finger protein-related contains si... 31 0.30
At1g03830.1 68414.m00364 guanylate-binding family protein contai... 31 0.30
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 30 0.52
At4g16045.1 68417.m02434 meprin and TRAF homology domain-contain... 30 0.52
At3g04990.1 68416.m00542 hypothetical protein 30 0.52
At5g23750.2 68418.m02787 remorin family protein contains Pfam do... 29 0.69
At5g23750.1 68418.m02786 remorin family protein contains Pfam do... 29 0.69
At3g02400.1 68416.m00227 forkhead-associated domain-containing p... 29 0.69
At5g46020.1 68418.m05659 expressed protein 29 0.91
At5g35792.1 68418.m04296 hypothetical protein 29 0.91
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 29 0.91
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 0.91
At4g31570.1 68417.m04483 expressed protein 29 0.91
At4g08540.1 68417.m01405 expressed protein 29 0.91
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 29 0.91
At3g48940.1 68416.m05346 remorin family protein contains Pfam do... 29 0.91
At1g75100.1 68414.m08722 expressed protein low similarity to SP|... 29 0.91
At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein... 29 1.2
At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein... 29 1.2
At5g04020.1 68418.m00382 calmodulin-binding protein-related (PIC... 29 1.2
At4g31340.1 68417.m04445 myosin heavy chain-related contains wea... 29 1.2
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 29 1.2
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 28 1.6
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 28 1.6
At5g61460.1 68418.m07712 structural maintenance of chromosomes (... 28 1.6
At5g56360.1 68418.m07034 calmodulin-binding protein similar to a... 28 1.6
At3g21160.1 68416.m02673 mannosyl-oligosaccharide 1,2-alpha-mann... 28 1.6
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 28 1.6
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 28 1.6
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 28 2.1
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 28 2.1
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 28 2.1
At3g47910.1 68416.m05224 expressed protein low similarity to non... 28 2.1
At3g17360.1 68416.m02218 kinesin motor protein-related similar t... 28 2.1
At1g68790.1 68414.m07863 expressed protein 28 2.1
At1g49160.2 68414.m05512 protein kinase family protein contains ... 28 2.1
At1g49160.1 68414.m05511 protein kinase family protein contains ... 28 2.1
At1g45976.1 68414.m05206 expressed protein 28 2.1
At3g53540.1 68416.m05912 expressed protein 27 2.8
At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing ... 27 2.8
At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing ... 27 2.8
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 27 2.8
At1g68990.1 68414.m07895 DNA-directed RNA polymerase, mitochondr... 27 2.8
At4g27980.1 68417.m04014 expressed protein 27 3.7
At4g27595.1 68417.m03964 protein transport protein-related low s... 27 3.7
At3g01230.1 68416.m00029 expressed protein 27 3.7
At2g47220.1 68415.m05897 3' exoribonuclease family domain 1 prot... 27 3.7
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 27 3.7
At2g35155.1 68415.m04312 expressed protein 27 3.7
At2g12875.1 68415.m01402 hypothetical protein 27 3.7
At1g26310.1 68414.m03209 MADS-box protein, putative strong simil... 27 3.7
At5g46320.1 68418.m05702 hypothetical protein 27 4.9
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 27 4.9
At5g01910.1 68418.m00110 hypothetical protein 27 4.9
At4g40020.1 68417.m05666 hypothetical protein 27 4.9
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 27 4.9
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 27 4.9
At3g12190.1 68416.m01520 hypothetical protein 27 4.9
At3g05830.1 68416.m00654 expressed protein 27 4.9
At2g38720.1 68415.m04755 microtubule associated protein (MAP65/A... 27 4.9
At1g08620.1 68414.m00955 transcription factor jumonji (jmj) fami... 27 4.9
At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit (... 26 6.4
At5g41140.1 68418.m05001 expressed protein 26 6.4
At5g16210.1 68418.m01894 HEAT repeat-containing protein contains... 26 6.4
At5g08780.1 68418.m01041 histone H1/H5 family protein contains P... 26 6.4
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 26 6.4
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 26 6.4
At3g23930.1 68416.m03006 expressed protein 26 6.4
At3g10500.1 68416.m01260 no apical meristem (NAM) family protein... 26 6.4
At3g07780.1 68416.m00949 expressed protein 26 6.4
At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zi... 26 6.4
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 26 6.4
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 26 6.4
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 26 6.4
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 26 6.4
At1g29150.1 68414.m03567 26S proteasome regulatory subunit, puta... 26 6.4
At1g14740.1 68414.m01762 expressed protein 26 6.4
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 26 6.4
At5g64870.1 68418.m08160 expressed protein 26 8.5
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 26 8.5
At4g35110.2 68417.m04989 expressed protein 26 8.5
At4g35110.1 68417.m04988 expressed protein 26 8.5
At3g11590.1 68416.m01416 expressed protein 26 8.5
At3g05110.1 68416.m00555 hypothetical protein 26 8.5
At2g48050.1 68415.m06014 expressed protein ; expression supporte... 26 8.5
At2g21230.1 68415.m02520 bZIP family transcription factor contai... 26 8.5
At1g13330.1 68414.m01547 expressed protein similar to nuclear re... 26 8.5
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
E V E++E K ++++L+ K+E +NK+LEE++K + + EV + +++
Sbjct: 525 EGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEEEKKTVLSLNKEVKGMEKQI 580
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/51 (21%), Positives = 31/51 (60%)
Frame = +2
Query: 161 QARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL 313
+ ++++++ + + +E+ E+ KK+ ++L K + NK+++ EKQ+
Sbjct: 530 ELKESSVKNQSLQKELVEIYKKVETSNKELEEEKKTVLSLNKEVKGMEKQI 580
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 36.3 bits (80), Expect = 0.006
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +2
Query: 137 TRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLT 316
T A+ E++AR L + + + V E +K + ++EE L K E+ N+ +EEKEK
Sbjct: 252 TIAELTEEEARKQELLVQNLRQLVEEKKKDMKEIEE---LCSVKSEELNQLMEEKEKNQQ 308
Query: 317 ATESEVXALNRK 352
E+ A+ +
Sbjct: 309 KHYRELNAIQER 320
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 36.3 bits (80), Expect = 0.006
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +2
Query: 137 TRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLT 316
T A+ E++AR L + + + V E +K + ++EE L K E+ N+ +EEKEK
Sbjct: 252 TIAELTEEEARKQELLVQNLRQLVEEKKKDMKEIEE---LCSVKSEELNQLMEEKEKNQQ 308
Query: 317 ATESEVXALNRK 352
E+ A+ +
Sbjct: 309 KHYRELNAIQER 320
>At2g38823.1 68415.m04770 expressed protein
Length = 258
Score = 36.3 bits (80), Expect = 0.006
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +2
Query: 83 RSXKKMQAMKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNK 262
RS ++ A L++ C+ T D+ + L + + + +RELQK + + K
Sbjct: 143 RSDRRKAAHDLLKDVCNPTSHDSLR---KSVELEIKALKKLIRELQKDWEEKQHVKQYTK 199
Query: 263 NK---LEQANKDLEEKEKQLTATESE 331
NK LEQ K LE+K++QL E
Sbjct: 200 NKYKDLEQKVKHLEKKKEQLAGLRDE 225
>At5g61070.1 68418.m07663 histone deacetylase family protein (HDA18)
identical to HDA18 [Arabidopsis thaliana] GI:21105769;
similar to SP|Q9UBN7 Histone deacetylase 6 (HD6) {Homo
sapiens}; contains Pfam profile PF00850: Histone
deacetylase family
Length = 682
Score = 33.9 bits (74), Expect = 0.032
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +2
Query: 140 RADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDL-----ILNKNK---LEQANKDLE 295
+ ++ +Q+ +A +AE++++E++E + + + +ED L + K + NKDLE
Sbjct: 498 KIESLQQERDEAVAKAERIDKELQEDRARSQEFKEDTEFCLSTLRREKELAIMAKNKDLE 557
Query: 296 EKEKQLTATESEVXALNRKV 355
KEK+L A V A K+
Sbjct: 558 AKEKELEARLMLVHAREDKI 577
Score = 32.3 bits (70), Expect = 0.098
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 185 AEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
A+ + EV EL+ +A + +L + +L+ NK+LE EK+L A
Sbjct: 436 ADALLREVEELKSLMAARDGELEARRKELKAKNKELEANEKELEA 480
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 33.9 bits (74), Expect = 0.032
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 125 QCHGTRADTCEQQARDANLRAEKVNE--EVRELQKKLAQVEEDLILNKNKLEQANKDLEE 298
+C G ++ + + L E N E ELQ KL+ +E + N+LE + +E+
Sbjct: 438 KCQGLEKESGDLAEVNLKLNLELANHGSEANELQTKLSALEAEKEQTANELEASKTTIED 497
Query: 299 KEKQLTA 319
KQLT+
Sbjct: 498 LTKQLTS 504
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Frame = +2
Query: 194 VNEEVRELQKKL----AQVEEDLILNKNK-------LEQANKDLEEKEKQLTATESEVXA 340
+NE+V +LQK+L + ++E + K L+++ +++E K+K +T ES V
Sbjct: 624 LNEQVLQLQKELQAAQSSIDEQKQAHSQKQSELESALKKSQEEIEAKKKAVTEFESMVKD 683
Query: 341 LNRKV 355
L +KV
Sbjct: 684 LEQKV 688
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 33.5 bits (73), Expect = 0.042
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +2
Query: 47 GTVTTKSRHHGTRSXKKMQAMKL----VEGQCHGTRADTCEQQARDANLRAEKVNEEVRE 214
G K R+ + KK A K+ ++ + R ++ + +++E++ +
Sbjct: 428 GIYIPKDRYIQEEAEKKAMAEKIERLELQSESKDKRVVDLQELYNSQQILTAELSEKLEK 487
Query: 215 LQKKLAQVEEDLILNKNKLEQANKDLEEKE 304
+KKL + E L + K QAN ++EKE
Sbjct: 488 TEKKLEETEHSLFDLEEKYRQANATIKEKE 517
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 33.1 bits (72), Expect = 0.056
Identities = 15/63 (23%), Positives = 37/63 (58%)
Frame = +2
Query: 116 VEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLE 295
V+ + + + ++ E+Q +D + + +E+V E ++++ ++ ED+ KL AN+++
Sbjct: 71 VQVKTYENQVESYEEQVKDFEEQIDAYDEKVHEYEEQVQKLNEDVEDLNEKLSVANEEIV 130
Query: 296 EKE 304
KE
Sbjct: 131 TKE 133
>At1g18410.1 68414.m02299 kinesin motor protein-related similar to
kinesin-related protein GB:AAF24855 GI:6692749 from
[Arabidopsis thaliana]
Length = 1140
Score = 33.1 bits (72), Expect = 0.056
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 140 RADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEE-KEKQLT 316
R EQ +DA++ + + E VREL+K E D + K LE+ K+L++ K++ +T
Sbjct: 397 RVKELEQMRKDASVARKALEERVRELEK--MGKEADAV--KMNLEEKVKELQKYKDETIT 452
Query: 317 ATESEVXALNRKV 355
T S + NR++
Sbjct: 453 VTTS-IEGKNREL 464
>At3g12360.1 68416.m01541 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 590
Score = 32.7 bits (71), Expect = 0.074
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +2
Query: 164 ARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
AR LRA ++N+ EL+ + Q++ D+ + + ++ NK++ K+L E
Sbjct: 358 ARSGALRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLHRE 413
>At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 200 EEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
E + + Q + ++E+ + + K LEQ NK+ E E Q + TE ++ LN +V
Sbjct: 108 ELLSKAQARATELEKQVEVLKKFLEQKNKEKELIEAQTSETEKKLNELNSRV 159
>At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 200 EEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
E + + Q + ++E+ + + K LEQ NK+ E E Q + TE ++ LN +V
Sbjct: 108 ELLSKAQARATELEKQVEVLKKFLEQKNKEKELIEAQTSETEKKLNELNSRV 159
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 31.9 bits (69), Expect = 0.13
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 83 RSXKKMQAMKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQV--EEDLIL 256
RS ++ + K + + + D +++ ++ L E+ + + +E +KK ++ +ED++
Sbjct: 142 RSEERRERKKEKKKKKNNKDEDVVDEKVKE-KLEDEQKSADRKERKKKKSKKNNDEDVVD 200
Query: 257 NKNKLEQANKDLEEKEKQLTATESEV 334
K KLE K E KEK+ E V
Sbjct: 201 EKEKLEDEQKSAEIKEKKKNKDEDVV 226
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVX 337
++++DA++ EKVNE++ Q+ + E K K + ++EK K+ E E
Sbjct: 121 KKSKDADVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKE--KLEDEQK 178
Query: 338 ALNRK 352
+ +RK
Sbjct: 179 SADRK 183
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 116 VEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILN---KNKLEQANK 286
+ GQ G + ++ +A RAE++NE V+E K +++E ++ N K ++E A
Sbjct: 303 LRGQVVGLEK-SLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAMV 361
Query: 287 DLEEKEKQLTATESEVXALNRKV 355
+KEK + E L ++V
Sbjct: 362 QFSDKEKLVEQLLREKNELVQRV 384
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
+K+ EE+ E +KK VE +L +LE + +EE + L E+E
Sbjct: 197 DKIQEEIPEYKKKSEMVEMSKMLAVEELESTKRLIEELKLNLEKAETE 244
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
+K EEV EL+K LA++ E KLE K+ E K E V L RK+
Sbjct: 117 DKTAEEVAELKKALAEIVE-------KLEGCEKEAEGLRKDRAEVEKRVRDLERKI 165
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 134 GTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL 313
G + E++ D + +++ E REL+++L ++ ++ K+ + N+ E EK++
Sbjct: 19 GVKTTELERKIEDMENKNQELTRENRELKERLERLTGEIEEMKDVEAEMNQRFGEMEKEI 78
Query: 314 TATESEVXAL 343
E E AL
Sbjct: 79 EEYEEEKKAL 88
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 209 RELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
REL++++ + +DL L NK+ +K +E + +L T+ EV
Sbjct: 182 RELEEEIERKTKDLTLVMNKIVDCDKRIETRSLELIKTQGEV 223
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 31.5 bits (68), Expect = 0.17
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 47 GTVTTKSRHHGTRSXKKMQAMKL----VEGQCHGTRADTCEQQARDANLRAEKVNEEVRE 214
G K R+ + KK A K+ VEG+ + ++ L + E++ +
Sbjct: 430 GIYIPKERYTQEEAEKKAMADKIEQMEVEGEAKDKQIIDLQELYNSEQLVTAGLREKLDK 489
Query: 215 LQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLT-ATESEVXALNRKV 355
+KKL + E+ L+ + K QA ++EKE ++ +SE ++R V
Sbjct: 490 TEKKLYETEQALLDLEEKHRQAVATIKEKEYLISNLLKSEKTLVDRAV 537
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 31.5 bits (68), Expect = 0.17
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +2
Query: 38 NSTGTVTTKSRHHGTRSXKKMQAMKLVEGQCHGTRADTCEQQARDANL--RAEKVNEEVR 211
+S+ + + S R+ + ++L++ Q + + + + A E V E +
Sbjct: 97 SSSSSSDSDSDKKSKRNGRGENEIELLKKQMEDANLEIADLKMKLATTDEHKEAVESEHQ 156
Query: 212 ELQKKLAQVEE---DLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
E+ KKL + +E +L + KL NK+L EK + TES+ LN+K+
Sbjct: 157 EILKKLKESDEICGNLRVETEKLTSENKELNEKLEVAGETESD---LNQKL 204
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 209 RELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRK 352
+E + KL + ++ L K +LE+ K LEE++KQL E EV N +
Sbjct: 54 KEEKNKLEEEKKKLEKEKKQLEEEKKQLEEEKKQL---EFEVMGANER 98
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/46 (32%), Positives = 31/46 (67%)
Frame = +2
Query: 197 NEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
NE++++ +++ ++EE+ K KLE+ K LEE++KQL + ++
Sbjct: 47 NEDMKKHKEEKNKLEEE----KKKLEKEKKQLEEEKKQLEEEKKQL 88
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 31.1 bits (67), Expect = 0.23
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +2
Query: 62 KSRHHGTRSXKKMQAMKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVE 241
+ R + K+ +A + E + + E++ R+ A K EE + +++ + E
Sbjct: 445 RRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEE-EARKREEERKREEEEAKRRE 503
Query: 242 EDLILNKNKLEQANKDLEEKEKQ 310
E+ + + EQA K EE+EK+
Sbjct: 504 EERKKREEEAEQARKREEEREKE 526
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 31.1 bits (67), Expect = 0.23
Identities = 20/83 (24%), Positives = 41/83 (49%)
Frame = +2
Query: 107 MKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANK 286
M V G H ++ Q ++ + EK EEV E + +L ++E+ +N+L +
Sbjct: 95 MDQVNGMKH--ELESLRSQKDESEAKLEKKVEEVTETKMQLKSLKEETEEERNRLSEEID 152
Query: 287 DLEEKEKQLTATESEVXALNRKV 355
L+ + + L SE+ +L+ ++
Sbjct: 153 QLKGENQMLHRRISELDSLHMEM 175
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 212 ELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
E+++++ Q E + KNKL +A+ + E+ L TES + +L++++
Sbjct: 968 EMEQEMLQKEASI--QKNKLTEAHSTINSLEETLAQTESNMDSLSKQI 1013
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLE---EKEKQLTATESEVXALNRKV 355
++ E+ +L +L Q+ + KN+++ ++DLE E E +L AT+ E L + +
Sbjct: 748 DEKKSEIEKLMLELQQLGGTVDGYKNQIDMLSRDLERTKELETELVATKEERDQLQQSL 806
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 30.7 bits (66), Expect = 0.30
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 122 GQCHGTRADTCEQQARD----ANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKD 289
G+ +G EQ+ +D A + EK ++ E +KK + +E K+KLE+ KD
Sbjct: 51 GKSNGNGPKDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKE--KKDKLEKEKKD 108
Query: 290 LEEKEKQ 310
E KEK+
Sbjct: 109 KERKEKE 115
>At5g53620.2 68418.m06662 expressed protein
Length = 682
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/88 (20%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 71 HHGTRSXKKMQA-MKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEED 247
H RS ++ + ++ + + H + D A++ LR + N+E+ +++ E +
Sbjct: 130 HENERSIREAERKLEEKDRELHAIKLDNEAAWAKEGILREQ--NKELATFRRERDHSEAE 187
Query: 248 LILNKNKLEQANKDLEEKEKQLTATESE 331
N +K+ + + ++EKE QL+ + +
Sbjct: 188 RSQNIHKISELQEHIQEKESQLSELQEQ 215
>At5g53620.1 68418.m06661 expressed protein
Length = 682
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/88 (20%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 71 HHGTRSXKKMQA-MKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEED 247
H RS ++ + ++ + + H + D A++ LR + N+E+ +++ E +
Sbjct: 130 HENERSIREAERKLEEKDRELHAIKLDNEAAWAKEGILREQ--NKELATFRRERDHSEAE 187
Query: 248 LILNKNKLEQANKDLEEKEKQLTATESE 331
N +K+ + + ++EKE QL+ + +
Sbjct: 188 RSQNIHKISELQEHIQEKESQLSELQEQ 215
>At4g38910.1 68417.m05514 expressed protein
Length = 445
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 206 VRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXAL 343
V+E + +A +E L LEQ +K L E++ + TES + AL
Sbjct: 66 VKERNEAVAATKEALASRDEALEQRDKALSERDNAIMETESALNAL 111
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +2
Query: 218 QKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
++ L E L+ +KNKL +A ++LE++EK ++ + +L ++
Sbjct: 125 EEDLHDAERKLLSDKNKLNRAKEELEKREKTISEASLKHESLQEEL 170
>At2g44790.1 68415.m05574 uclacyanin II strong similarity to
uclacyanin II GI:3399769 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin II GI:3399768
Length = 202
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 202 GSPXTPEEARPGGGRPDPEQEQTGAGQQGP 291
G+P TPE P GG P P GAG P
Sbjct: 143 GTPTTPESP-PSGGSPTPTTPTPGAGSTSP 171
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 30.7 bits (66), Expect = 0.30
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Frame = +2
Query: 92 KKMQAMKLVEGQCHGTRADTCEQQARDANLRA-EKVNEEVRELQKKLAQVE---ED---- 247
K+M+ +++ E H R D + R+ ++ ++ +EVR+L++KL + ED
Sbjct: 1346 KEMEKLRM-ETDLHKKRVDELRETYRNIDIADYNRLKDEVRQLEEKLKAKDAHAEDCKKV 1404
Query: 248 LILNKNKLEQANKDLEEKEKQLTATESEV 334
L+ +NK+ K+L +K L+ E +
Sbjct: 1405 LLEKQNKISLLEKELTNCKKDLSEREKRL 1433
>At1g29570.1 68414.m03616 zinc finger protein-related contains
similarity to zinc finger proteins (CCCH type)
Length = 321
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 68 RHHGTRSXKKMQAMKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVE-E 244
RHH T + + M+ +E Q + EQ+ RD+ R + EE + Q++ +E +
Sbjct: 160 RHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQ 219
Query: 245 DLILNKNKLEQANKDLEEKEKQ 310
+N +Q +D E++++
Sbjct: 220 RREAQENLQQQRQRDSIERQRR 241
>At1g03830.1 68414.m00364 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 991
Score = 30.7 bits (66), Expect = 0.30
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +2
Query: 140 RADTCEQQARDANLRAEKVNEE---VRELQKKLAQVEEDLILNKNKLE-QANKDLEEKEK 307
+ D C +A+D L+ +NE+ V+ + L E L K++L+ + + LEE EK
Sbjct: 599 KVDECSSEAKDVRLQMSLLNEKYESVKSASELLETETETLKREKDELDKKCHIHLEELEK 658
Query: 308 ---QLTATESEVXALNRKV 355
+LT ESE + V
Sbjct: 659 LVLRLTNVESEALEAKKLV 677
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 29.9 bits (64), Expect = 0.52
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +2
Query: 170 DANLRAEKVNE-EVRELQKKLAQVEEDLILNKNKLEQANKD-------LEEKEKQLTATE 325
++ RA ++ E ++++ + + + E DL + L + KD L+EKEK L ATE
Sbjct: 409 ESKRRAWELREVDIKQREDLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEKNLVATE 468
Query: 326 SEVXALNRK 352
++ NRK
Sbjct: 469 EDI---NRK 474
Score = 25.8 bits (54), Expect = 8.5
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +2
Query: 101 QAMKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQA 280
+ + +E H RA+ E + + +E + + + KKLA E + + +A
Sbjct: 138 ECISSLEKTLHEMRAECAETKVSAGSTMSE-AHVMIEDALKKLADAEAKMRAAEALQAEA 196
Query: 281 NKDLEEKEKQLTATESEVXALNRKV 355
N+ E++L ES L R++
Sbjct: 197 NRYHRIAERKLKEVESREDDLTRRL 221
>At4g16045.1 68417.m02434 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein contains Pfam
profile PF00917: MATH domain
Length = 382
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 200 EEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXAL 343
EE R + L +V ++N N+ E A K+LEE+ K+ + + AL
Sbjct: 202 EEKRRRLETLVRVVAKEVINSNQSESAMKNLEEETKKERTNDDKEFAL 249
>At3g04990.1 68416.m00542 hypothetical protein
Length = 227
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 203 EVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
E R +QK+ ++E++ K +L ++E KQL EV ++++
Sbjct: 122 EARHVQKRKREMEDETATKKKELSMTVDQIQESGKQLEKKSREVELKDKEI 172
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 218 QKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
+ + + +L L + +L+ + DLE+K A +SEV L + V
Sbjct: 29 EANIEKSSRELDLKEKELQILSSDLEQKSHAFEAEKSEVGDLKKLV 74
>At5g23750.2 68418.m02787 remorin family protein contains Pfam
domain, PF03766: Remorin, N-terminal region; contains
Pfam domain, PF03763: Remorin, C-terminal region
Length = 201
Score = 29.5 bits (63), Expect = 0.69
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 176 NLRAEKVNEEVRELQKKLAQVEEDLILN-KNKLEQANKDLEEKEKQLTATESE 331
N + V E+++++++L + + + + KNK+ Q +K+ EEK + A E
Sbjct: 123 NNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGE 175
>At5g23750.1 68418.m02786 remorin family protein contains Pfam
domain, PF03766: Remorin, N-terminal region; contains
Pfam domain, PF03763: Remorin, C-terminal region
Length = 202
Score = 29.5 bits (63), Expect = 0.69
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 176 NLRAEKVNEEVRELQKKLAQVEEDLILN-KNKLEQANKDLEEKEKQLTATESE 331
N + V E+++++++L + + + + KNK+ Q +K+ EEK + A E
Sbjct: 124 NNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGE 176
>At3g02400.1 68416.m00227 forkhead-associated domain-containing
protein / FHA domain-containing protein / AT hook
motif-containing protein contains Pfam profiles PF00498:
FHA domain, PF02178: AT hook motif
Length = 585
Score = 29.5 bits (63), Expect = 0.69
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +2
Query: 83 RSXKKMQAMKLVEGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNK 262
R + + ++ +E +CH +D ++A A L EKV + KK+ +VE + L K
Sbjct: 482 REDGETENLQEIEEECHDEESDCKVEEAGFATLDEEKVGQGWN--NKKVERVE--VYLEK 537
Query: 263 NKLEQANKDLEEKEKQLTATESE 331
KL + +E + + T E+E
Sbjct: 538 MKLREWFDAIEVQLPKQTIEETE 560
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = +2
Query: 128 CHGTRADTCEQQAR---DANLRAEKVNEEVRELQK----KLAQVEEDLILNKNKLEQANK 286
C G D C+Q+ D + R E+V E+R+ K E+ N +E+ +
Sbjct: 371 CSGRSDDICDQEDEKECDGSKRVEQVEIELRKKSTVEGLKCTDKEDGETENSQDIERERE 430
Query: 287 DLEEKEKQLTATE 325
+ EKE Q +E
Sbjct: 431 NENEKEAQEGCSE 443
>At5g46020.1 68418.m05659 expressed protein
Length = 164
Score = 29.1 bits (62), Expect = 0.91
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 92 KKMQAMKLVE-GQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNK 268
KK A ++E + R T + + DA+ E E EL+K+ A + + K
Sbjct: 64 KKKGAEAVIEVDNPNRVRQKTLKAKDLDASKTTELSRREREELEKQRAHERYMRLQEQGK 123
Query: 269 LEQANKDLE 295
EQA KDL+
Sbjct: 124 TEQARKDLD 132
>At5g35792.1 68418.m04296 hypothetical protein
Length = 132
Score = 29.1 bits (62), Expect = 0.91
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Frame = +2
Query: 83 RSXKKMQAMKLVEG-----QCHGTRADTCEQQARDANLRAEKVNE----EVREL-----Q 220
R+ ++M+ + ++EG C G+ DT + + R K N +R+L +
Sbjct: 19 RAIEQMEMVAMMEGIPKFCPCGGSIVDTRKDEKRYYQCEKFKDNRTDCMHIRKLWDKAIE 78
Query: 221 KKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
++++ + E + N+NK+ +EE +K+L A +E+ +++ V
Sbjct: 79 EEVSSLRESVDYNQNKVLSHEYLIEEMQKELKAHRAEIVNVSKVV 123
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 29.1 bits (62), Expect = 0.91
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 92 KKMQAMKLVEGQCHGTRADTCEQQARDANLRAEKV--NEEVRELQKKLAQVEEDLILNKN 265
KK++ +K + + AD EQ+ + E++ NE+ K +EE ++ K
Sbjct: 1147 KKIKKIKQADERDQIKHADEREQRKHSKDHEEEEIESNEKEERRHSKDYVIEELVLKGKG 1206
Query: 266 KLEQANKDLEEKEKQLTATESEV 334
K +Q + D ++++Q+ ++ V
Sbjct: 1207 KRKQLDDDKADEKEQIKHSKDHV 1229
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Frame = +2
Query: 137 TRADTCEQQARDANLRAEKVNEEVRELQ---------KKLAQVEE-DLILNKNKLEQANK 286
+R T ++A + L+ + E+ RELQ KK+ Q +E D I + ++ EQ
Sbjct: 1113 SRRTTALEEALEEALKEREKLEDTRELQIALIESKKIKKIKQADERDQIKHADEREQRKH 1172
Query: 287 DLEEKEKQLTATESE 331
+ +E+++ + E E
Sbjct: 1173 SKDHEEEEIESNEKE 1187
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 29.1 bits (62), Expect = 0.91
Identities = 12/61 (19%), Positives = 32/61 (52%)
Frame = +2
Query: 170 DANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNR 349
D + E + L+ +A+ +EDL +++ +L +++ + EK++ +SE+ +
Sbjct: 363 DTETEITDLKERIVTLETTVAKQKEDLEVSEQRLGSVEEEVSKNEKEVEKLKSELETVKE 422
Query: 350 K 352
+
Sbjct: 423 E 423
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 29.1 bits (62), Expect = 0.91
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +2
Query: 125 QCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKE 304
Q T + EQ++R + AE + E+ E+Q+ ++EDL +++Q +++ + E
Sbjct: 1967 QTMSTTVTSAEQESRKSRRAAELLLAELNEVQETNDSLQEDLSKFTYEIQQLSREKDAAE 2026
>At4g08540.1 68417.m01405 expressed protein
Length = 473
Score = 29.1 bits (62), Expect = 0.91
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 197 NEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATES 328
NE++ +L+KKL +E + K K+E+ + DL+ K L + S
Sbjct: 70 NEKISKLKKKLKSNKELVTQGKVKIERGSSDLKVKYGVLDSARS 113
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 29.1 bits (62), Expect = 0.91
Identities = 13/57 (22%), Positives = 34/57 (59%)
Frame = +2
Query: 185 AEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
AEK + ++ ++Q +L + +E++ K K+E KD+++++K+ E+ + + +
Sbjct: 295 AEK-SSKLGKIQPELLRFKEEIARIKAKIETNRKDVDKRKKEKGKHSKEIEQMQKSI 350
>At3g48940.1 68416.m05346 remorin family protein contains Pfam
domain, PF03766: Remorin, N-terminal region and Pfam
domain, PF03763: Remorin, C-terminal region
Length = 175
Score = 29.1 bits (62), Expect = 0.91
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
+ ++ A++ AE E +L KK A E + KNK+ Q +K+ EEK A E
Sbjct: 96 ENSKKASVEAELKKIE-EQLNKKKAHYTEQM---KNKIAQIHKEAEEKRAMTEAKRGE 149
>At1g75100.1 68414.m08722 expressed protein low similarity to
SP|O14976 Cyclin G-associated kinase (EC 2.7.1.-) {Homo
sapiens}
Length = 651
Score = 29.1 bits (62), Expect = 0.91
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 242 EDLILNKNKLEQANKDLEE 298
ED+ ++NK+E+ANKD EE
Sbjct: 534 EDITQDENKMEEANKDAEE 552
>At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1260
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVREL-QKKLAQVEEDLILN----KNKLEQANKDLEEKEKQLTA 319
E + + NL EK +E E+ QK+ Q ++ L L +NKLE +DL+ E + +
Sbjct: 759 ENKILEQNLNIEKKKKEEVEIHQKRYEQEKKVLKLRVSELENKLEVLAQDLDSAESTIES 818
Query: 320 TESEVXALNRKV 355
S++ L +
Sbjct: 819 KNSDMLLLQNNL 830
>At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1259
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVREL-QKKLAQVEEDLILN----KNKLEQANKDLEEKEKQLTA 319
E + + NL EK +E E+ QK+ Q ++ L L +NKLE +DL+ E + +
Sbjct: 758 ENKILEQNLNIEKKKKEEVEIHQKRYEQEKKVLKLRVSELENKLEVLAQDLDSAESTIES 817
Query: 320 TESEVXALNRKV 355
S++ L +
Sbjct: 818 KNSDMLLLQNNL 829
>At5g04020.1 68418.m00382 calmodulin-binding protein-related (PICBP)
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 1495
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQK-KLAQVEEDLILNKNKLEQANKDLEEKEK 307
+Q+ +++ A NE E+ + KL ++EDL KL+ +KDLEEK++
Sbjct: 1258 RQSSISSMAAHYENEANAEIIRGKLRNLQEDL-KESAKLDGVSKDLEEKQQ 1307
>At4g31340.1 68417.m04445 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, nonmuscle type A
(Cellular myosin heavy chain, type A) (Nonmuscle myosin
heavy chain-A) (NMMHC-A) (Swiss-Prot:P35579) [Homo
sapiens]
Length = 437
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +2
Query: 200 EEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALN 346
+++ + Q + ++E+ + + KN LEQ NK+ + E + E ++ LN
Sbjct: 105 KQLGKAQARADELEKQVEVLKNFLEQKNKEKDSTEARTNEAEKKLRELN 153
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 164 ARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL-TATESEVXA 340
++ A+ E N V ++ + +E + + KLE+ N+D++ ++K L ATE A
Sbjct: 648 SKRAHEAEELANARVAAAVSRIEEAKETEMRSLEKLEEVNRDMDARKKALKEATEKAEKA 707
Query: 341 LNRKV 355
K+
Sbjct: 708 KEGKL 712
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 125 QCHGTRADTCEQQARD-ANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEK 301
Q H + E Q +D +NL ++ L ++ AQ EE+L + + +++EE
Sbjct: 624 QVHHYGNNNTESQQQDVSNLSTSAAEHQILILARQQAQREEELAQTQRHILALQEEIEEL 683
Query: 302 EKQ 310
E++
Sbjct: 684 ERE 686
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 125 QCHGTRADTCEQQARD-ANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEK 301
Q H + E Q +D +NL ++ L ++ AQ EE+L + + +++EE
Sbjct: 624 QVHHYGNNNTESQQQDVSNLSTSAAEHQILILARQQAQREEELAQTQRHILALQEEIEEL 683
Query: 302 EKQ 310
E++
Sbjct: 684 ERE 686
>At5g61460.1 68418.m07712 structural maintenance of chromosomes
(SMC) family protein very strong similarity to SMC-like
protein (MIM) [Arabidopsis thaliana] GI:5880614;
contains Pfam profile PF02463: RecF/RecN/SMC N terminal
domain
Length = 1057
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 179 LRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
L + VNE RE+ K L +++E KL+ K+ E K +LTA
Sbjct: 710 LPSSSVNELQREIMKDLEEIDEKEAF-LEKLQNCLKEAELKANKLTA 755
>At5g56360.1 68418.m07034 calmodulin-binding protein similar to
alpha glucosidase II beta subunit from GI:2104691 [Mus
musculus]
Length = 647
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 215 LQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
L+KK+ + L++ + ++EQA LE+ +L +SE
Sbjct: 144 LKKKIETYNQGLVIRRQEIEQAKVGLEKDAAELKKLKSE 182
>At3g21160.1 68416.m02673 mannosyl-oligosaccharide
1,2-alpha-mannosidase, putative similar to
mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine
max][GI:6552504]
Length = 572
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 164 ARDANLRAEKVNEEVRELQKKLAQVE---EDLILNKNKLEQANKDLEEKEKQLTATESEV 334
+RD K+NEEV LQ+ L +++ ED ++ N L+ +D + ++ E+ V
Sbjct: 50 SRDYQFEVSKLNEEVLRLQQMLEEIKSVTED--VSVNSLKDVQEDPVDAQRMQRVKEAMV 107
Query: 335 XA 340
A
Sbjct: 108 HA 109
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 212 ELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
ELQ +L Q++EDL ++E KD + L +E V N K+
Sbjct: 55 ELQTQLNQIQEDLKKADEQIELLKKDKAKAIDDLKESEKLVEEANEKL 102
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEE 298
+K +E++ L+K A+ +DL ++ +E+AN+ L+E
Sbjct: 68 KKADEQIELLKKDKAKAIDDLKESEKLVEEANEKLKE 104
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/66 (21%), Positives = 31/66 (46%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVX 337
++++D R +++ EL + ++ + N + + NK+L E+E L E+
Sbjct: 793 EESKDLREREVAYLKKIDELSTANGTLADN-VTNLQNISEENKELRERETTLLKKAEELS 851
Query: 338 ALNRKV 355
LN +
Sbjct: 852 ELNESL 857
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 143 ADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL 313
++T + QA+ + L AEK ++ +ELQ + + + L + +L LEE++ Q+
Sbjct: 503 SETDDFQAKLSVLEAEKY-QQAKELQITIEDLTKQLTSERERLRSQISSLEEEKNQV 558
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
E+ EVR L+K + Q+EE+ + +++ ++ ++EE ++ + + E+ L V
Sbjct: 178 EQSKYEVRSLEKLVRQLEEERVNSRD--SSSSMEVEELKEAMNLSRQEITQLKSAV 231
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
E+ EVR L+K + Q+EE+ + +++ ++ ++EE ++ + + E+ L V
Sbjct: 178 EQSKYEVRSLEKLVRQLEEERVNSRD--SSSSMEVEELKEAMNLSRQEITQLKSAV 231
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
E+ EVR L+K + Q+EE+ + +++ ++ ++EE ++ + + E+ L V
Sbjct: 180 EQSKYEVRSLEKLVRQLEEERVNSRD--SSSSMEVEELKEAMNLSRQEITQLKSAV 233
>At3g47910.1 68416.m05224 expressed protein low similarity to
nonmuscle myosin heavy chain (NMHC) [Homo sapiens]
GI:189036; contains Pfam profiles PF04780: Protein of
unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1290
Score = 27.9 bits (59), Expect = 2.1
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 12/110 (10%)
Frame = +2
Query: 38 NSTGTVTTKSRHHGTRSXKKMQAMKLVEGQCHGTRADTCEQQA---------RDANLRAE 190
NS T+ + +K++ MK G H + AD+ E +A++ +E
Sbjct: 946 NSKNTLEKSKDKKKIKDTRKVKDMKATIGSDHRSNADSVEHSPLPVAPVGDHSEADIVSE 1005
Query: 191 KVN---EEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
V EE E ++++ EE+ L K Q + E KEK + + +
Sbjct: 1006 AVEALKEEEEEYKRQIELEEEERKLEKTLEYQRRIEDEAKEKHMAEQQKK 1055
>At3g17360.1 68416.m02218 kinesin motor protein-related similar to
KLP2 protein GB:CAA63826 from [Xenopus laevis]
Length = 2008
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Frame = +2
Query: 188 EKVNEEVR-ELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL----TATESEVXALNR 349
E V E+V E + + +++E++I +++ ++ +L E+ + + TA ESE+ ALN+
Sbjct: 851 EVVREQVETETARTILELQEEVIALQSEFQRRICNLTEENQSIKDTITARESEIRALNQ 909
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 170 DANLRAEKVNEE-VRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
DA L+ K E+ ++ +KKL E L+ +K L + ++EE + T ES +
Sbjct: 425 DARLKTVKEKEKALKAEEKKLHMENERLLEDKECLRKLKDEIEEIGTETTKQESRI 480
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/67 (20%), Positives = 33/67 (49%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
+++ E++ E+ ++KLA+ E L + +++ KDL+ + K + E +
Sbjct: 379 DEELEGKKAEIEQLQVEISHKEEKLAKREAALEKKEEGVKKKEKDLDARLKTVKEKEKAL 438
Query: 335 XALNRKV 355
A +K+
Sbjct: 439 KAEEKKL 445
>At1g49160.2 68414.m05512 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 557
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 119 EGQCHGTRADTCEQQARDANLRAEKVNEEVRELQK--KLAQVEEDLILNKNKLEQANKDL 292
E H +D C + +AN E+ +E +K L + EED L K +LE+ +
Sbjct: 469 ESISHSLSSDYCPRSDDEANPTVAATTED-QEAEKPGSLEEEEEDERL-KEELEKIEERF 526
Query: 293 EEKEKQLTATESE 331
E+ K++T E
Sbjct: 527 REEMKEITRKREE 539
>At1g49160.1 68414.m05511 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 539
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 119 EGQCHGTRADTCEQQARDANLRAEKVNEEVRELQK--KLAQVEEDLILNKNKLEQANKDL 292
E H +D C + +AN E+ +E +K L + EED L K +LE+ +
Sbjct: 451 ESISHSLSSDYCPRSDDEANPTVAATTED-QEAEKPGSLEEEEEDERL-KEELEKIEERF 508
Query: 293 EEKEKQLTATESE 331
E+ K++T E
Sbjct: 509 REEMKEITRKREE 521
>At1g45976.1 68414.m05206 expressed protein
Length = 325
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 161 QARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXA 340
Q + +L EKV +++RE ++L ++ + ++EQ + E +++ E+ + A
Sbjct: 173 QQKTVSLMEEKVVQKLREKDEELERINRKNKELEVRMEQLTMEAEAWQQRAKYNENMIAA 232
Query: 341 LN 346
LN
Sbjct: 233 LN 234
>At3g53540.1 68416.m05912 expressed protein
Length = 924
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 224 KLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
K+ + DL+ K++ + + D+EEKE Q + E ++ + R++
Sbjct: 864 KIQETLRDLVTRKDE-KPSKYDVEEKELQWLSLEDDIEIIGREI 906
>At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +2
Query: 140 RADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
+ADT E+ + E + ++ E +KKLA +E+ + K E+A++ ++ K TA
Sbjct: 591 KADTLERLKETLRKKQEMLEQKRNEYRKKLATLEKQGTVVKR--EEADEPDAKRVKLDTA 648
Query: 320 TES 328
++S
Sbjct: 649 SDS 651
>At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +2
Query: 140 RADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
+ADT E+ + E + ++ E +KKLA +E+ + K E+A++ ++ K TA
Sbjct: 591 KADTLERLKETLRKKQEMLEQKRNEYRKKLATLEKQGTVVKR--EEADEPDAKRVKLDTA 648
Query: 320 TES 328
++S
Sbjct: 649 SDS 651
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTAT 322
+Q A++A +R K+ ++RE +++ + L +NK+E +D EK L T
Sbjct: 458 KQAAQEAQIR--KLRAQIREAEEEKKGLITKLQSEENKVESIKRDKTATEKLLQET 511
>At1g68990.1 68414.m07895 DNA-directed RNA polymerase, mitochondrial
(RPOMT) identical to SP|P92969 DNA-directed RNA
polymerase, mitochondrial precursor (EC 2.7.7.6)
{Arabidopsis thaliana}
Length = 976
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 176 NLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQ 277
N AE V+EE+ + + A+ + +++ KNKL Q
Sbjct: 275 NTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQ 308
>At4g27980.1 68417.m04014 expressed protein
Length = 565
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 185 AEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEK-QLTATES 328
AEK+ EE ++K L E+ L +LE +LEE + QL ES
Sbjct: 212 AEKLREETELMRKGLEIKEKTLEKRLKELELKQMELEETSRPQLVEAES 260
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 191 KVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEE 298
K NE++ L+K A+ +DL ++ ++AN+ L E
Sbjct: 99 KANEQIERLKKDKAKALDDLKESEKLTKEANEKLRE 134
>At3g01230.1 68416.m00029 expressed protein
Length = 126
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNR 349
++V+E R + +E+DL K+ +E+ DL EKE + ESEV L +
Sbjct: 17 QQVSEAHRPIDFNEEVLEKDLHEAKDLIEE---DLREKETSIRNLESEVSLLTK 67
>At2g47220.1 68415.m05897 3' exoribonuclease family domain 1
protein-related similar to polynucleotide phosphorylase
[Pisum sativum] GI:2286200, polyribonucleotide
phophorylase [Spinacia oleracea] GI:1924972; contains
Pfam profiles PF05266: Protein of unknown function
(DUF724), weak hit to PF01138: 3' exoribonuclease
family, domain 1
Length = 469
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
+++ +D + + K +E E+++K+ +V KNK+ + K EKQ AT ++
Sbjct: 399 DKEMKDESSKKHKAEQEFGEMERKILEV-------KNKVLELQKQEAALEKQKDATYEKI 451
Query: 335 XALNRK 352
+ +
Sbjct: 452 CKMESR 457
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/69 (18%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 146 DTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILN-KNKLEQANKDLEEKEKQLTAT 322
+ C + +RD EK+ EEV+E ++ + +++ +++L ++EK
Sbjct: 223 ELCSKASRDQGPNVEKLVEEVQEARRIRRLHKPTMVIGMQHELRDLKSQIQEKSAYSVKL 282
Query: 323 ESEVXALNR 349
+ E+ + +
Sbjct: 283 QREIAIIKK 291
>At2g35155.1 68415.m04312 expressed protein
Length = 579
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 212 ELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
+L + L +E DLI + ++LE A EE+ +TA +S V
Sbjct: 443 DLGRLLDLLELDLITSNHELEAAAAAREERNTSVTALDSTV 483
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 170 DANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
D +A E K + V+ED +KN+ E++ KD +EK ++ + E E
Sbjct: 88 DKGTKATTEEPSSTEQNKAIEAVKEDKY-DKNEEEKSEKDEQEKSEEEESEEEE 140
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 200 EEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
E + L L VEE+ KN+ E++ KD EEK ++ + E E
Sbjct: 183 EPILALTPVLEAVEEEKSY-KNEEEKSEKDEEEKSEEEESEEEE 225
>At1g26310.1 68414.m03209 MADS-box protein, putative strong
similarity to DNA-binding protein [Brassica rapa subsp.
pekinensis] GI:6469345, SP|Q41276 Floral homeotic
protein APETALA1 (MADS C) {Sinapis alba}; contains
InterPro accession IPR002100: Transcription factor,
MADS-box
Length = 255
Score = 27.1 bits (57), Expect = 3.7
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 155 EQQARDA--NLRAEK---VNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
EQQ A ++R+ K +NE + LQ+K +++E+ N + K ++E+E L
Sbjct: 131 EQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEE-----NSM--LTKQIKERENILRT 183
Query: 320 TESEVXALNRKV 355
+++ LNR V
Sbjct: 184 KQTQCEQLNRSV 195
>At5g46320.1 68418.m05702 hypothetical protein
Length = 118
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 218 QKKLAQVE-EDLILNKNKLEQANKDLEEKEKQLTATES 328
+K+++ ++ EDL++ + KLE DL++K +L A+ S
Sbjct: 80 RKEISDLKLEDLVVFQKKLENLQDDLKKKRVELEASLS 117
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Frame = -2
Query: 341 GXRPRIRWRSTASPSLQGPCWPAPV-----CSCSGSGLPPP 234
G + R R SP QGPC P P+ C+C + P
Sbjct: 432 GKKLRCRNHKCQSPCHQGPCAPCPIMVTISCACGETHFEVP 472
>At5g01910.1 68418.m00110 hypothetical protein
Length = 165
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 185 AEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL 313
AEK+ E + A + E+L K KLE+ +D E EK L
Sbjct: 30 AEKLKENLNLETSIDASLAEELSAFKKKLERLREDRESTEKLL 72
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKE 304
E++ R N + E V ++KK+ + E+ +NK E+ E+KE
Sbjct: 374 EEKQRSLNRQESMPKEVVEVVEKKIEEKEKKEEKKENKKEKKESKKEKKE 423
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 125 QCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDL-ILNKNKLEQANKDLEEK 301
Q T+ + + + + N+E+ ELQ +L E L + + + E+ N+ E+K
Sbjct: 291 QAEATKQNDFKDTINELESKCSVQNKEIEELQDQLVASERKLQVADLSTFEKMNEFEEQK 350
Query: 302 E 304
E
Sbjct: 351 E 351
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/67 (20%), Positives = 33/67 (49%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
+Q A A++ EEV+ L+ + ++E + + +NK+ + E + Q E E+
Sbjct: 2234 QQIAESRKTYADEREEEVKLLEGSVEELEYTINVLENKVNVVKDEAERQRLQREELEMEL 2293
Query: 335 XALNRKV 355
+ +++
Sbjct: 2294 HTIRQQM 2300
>At3g12190.1 68416.m01520 hypothetical protein
Length = 269
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
E R ++R K EE+R +KK + + + KL+ N+ LEEK+K++ E +
Sbjct: 192 EGDLRWVSMRMTKRCEELRWEKKKNLVLCKRNEEAERKLKHLNRALEEKQKEVDLIEKRL 251
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 167 RDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXA 340
++A R + + E+ +LQK+L + L + + ++ K+LEE +L T+ A
Sbjct: 56 KEAEKRGKNMEMEICKLQKRLEERNCQLEASASAADKFIKELEEFRLKLDTTKQTAEA 113
>At2g38720.1 68415.m04755 microtubule associated protein
(MAP65/ASE1) family protein low similarity to myosin
[Schistosoma japonicum] GI:3941320; contains Pfam
profile PF03999: Microtubule associated protein
(MAP65/ASE1 family)
Length = 587
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 155 EQQARDA-NLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
EQ+ D N + EK + ELQ+ LAQ E ++ + L + ++KE L S
Sbjct: 38 EQECLDIYNKKVEKTRKFRAELQRSLAQAEAEIASLMSALGEKVSFAKKKEGSLKEQISS 97
Query: 332 V 334
V
Sbjct: 98 V 98
>At1g08620.1 68414.m00955 transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein
contains Pfam domains, PF02375: jmjN domain, PF02373:
jmjC domain and PF02928: C5HC2 zinc finger
Length = 1183
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 209 RELQKKLAQVEEDLILNK-NKLEQANKDLEEKEKQLTAT 322
++LQ K+ E L K +KL N L+EKE+Q+T++
Sbjct: 697 KDLQLKVTSKEVSKELEKTSKLSHVNLLLKEKEEQITSS 735
>At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit
(IRX5) nearly identical to cellulose synthase
[Arabidopsis thaliana] GI:27462651; contains Pfam
profile PF03552: Cellulose synthase
Length = 1049
Score = 26.2 bits (55), Expect = 6.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 284 CWPAPVCSCSGSG 246
CWP+ +C C G G
Sbjct: 599 CWPSWICCCCGGG 611
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVX 337
++ R +++ E E ELQ+ + + E + K++LE A + + L+ ESE+
Sbjct: 748 EETRKSSMETEASLSE--ELQRIIDEKEAVITALKSQLETAIAPCDNLKHSLSNNESEIE 805
Query: 338 ALNRKV 355
L ++V
Sbjct: 806 NLRKQV 811
>At5g16210.1 68418.m01894 HEAT repeat-containing protein contains
Pfam profile PF02985: HEAT repeat
Length = 1180
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL 313
Q+ E++++E L K EE + E KDL ++EKQ+
Sbjct: 220 QENESLKKEIERLSKEKDGLLKSKENFEEQIGAFNKSTESLQKDLRDREKQV 271
>At5g08780.1 68418.m01041 histone H1/H5 family protein contains Pfam
domain, PF00538: linker histone H1 and H5 family
Length = 457
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 167 RDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALN 346
R +N E V E E KKL + + + N LE+ K +EK++Q A SE+ ++
Sbjct: 287 RTSNTTKENV-EVTSEAYKKLWECQTEACSNIIALEKMLKQCKEKDQQNKAV-SEIDDVS 344
Query: 347 R 349
R
Sbjct: 345 R 345
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 149 TCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATES 328
T EQ+ ++ ++ + EE K++ + E N+ KL++A LE+KE + E+
Sbjct: 769 TLEQEEKERQIKERQEREENERRAKEVLEQAE----NERKLKEA---LEQKENERRLKET 821
Query: 329 EVXALNRK 352
N+K
Sbjct: 822 REKEENKK 829
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 305 SPSLQGPCWPAPVCSCSGSGLPPPGRASSG 216
S S GP + P S SGS PPP +S G
Sbjct: 71 SSSGGGPYYYYPPASQSGSYRPPPSSSSGG 100
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEE 244
++ R+ +K+ EEVR L+KKL + EE
Sbjct: 46 KEAEREWRKERKKLREEVRRLRKKLEEREE 75
>At3g10500.1 68416.m01260 no apical meristem (NAM) family protein
similar to to NAC2 (GI:645671) [Arabidopsis thaliana];
contains Pfam PF02365: No apical meristem (NAM) protein
Length = 549
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 197 NEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXA 340
NE+V Q++L Q E L K + ++ +EEKEK + +V A
Sbjct: 376 NEDVFFDQEELFQEVETKELEKEETSRSKHVVEEKEKDEASCSKQVDA 423
>At3g07780.1 68416.m00949 expressed protein
Length = 566
Score = 26.2 bits (55), Expect = 6.4
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEV 334
E+ R+ +A++V E E QKK Q+EE + +L+QA E + QL A E++V
Sbjct: 421 EECEREVEEKAKQVAELQMERQKKKQQIEE--VERIVRLKQA----EAEMFQLKANEAKV 474
Query: 335 XA 340
A
Sbjct: 475 EA 476
>At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 188 EKVNEEVRELQKKLAQV---EEDLILNKNKLEQANKDLEEKEKQLTATESEVXAL 343
+K+ E++EL+ KL + +ED K K+++ ++LEEK +L E AL
Sbjct: 412 QKLQMEIQELKGKLKVMKHEDEDDEGIKKKMKKMKEELEEKCSELQDLEDTNSAL 466
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 26.2 bits (55), Expect = 6.4
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +2
Query: 119 EGQCHGTRADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEE 298
E C + D + E+ NE +L+KKL VEE K LE K L+
Sbjct: 195 EMSCAKAKEDEIASKVSQIGEELEESNETTAKLKKKLESVEE----AKETLEAEMKKLKV 250
Query: 299 KEKQ 310
+ +Q
Sbjct: 251 QTEQ 254
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 26.2 bits (55), Expect = 6.4
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 149 TCEQQARDANLRAEKVN--EEVR-ELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
T E + + L AEKV EV+ ++ +AQVE L L K LEEK ++L
Sbjct: 441 TKELEEQLEKLEAEKVELESEVKCNREEAVAQVENSLATEIEVLTCRIKQLEEKLEKLEV 500
Query: 320 TESEV 334
+ E+
Sbjct: 501 EKDEL 505
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 26.2 bits (55), Expect = 6.4
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 149 TCEQQARDANLRAEKVN--EEVR-ELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
T E + + L AEKV EV+ ++ +AQVE L L K LEEK ++L
Sbjct: 407 TKELEEQLEKLEAEKVELESEVKCNREEAVAQVENSLATEIEVLTCRIKQLEEKLEKLEV 466
Query: 320 TESEV 334
+ E+
Sbjct: 467 EKDEL 471
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 314 STASPSLQGPCWPAPVCSCSGSGLPPPGRASSGVXGL 204
S+A PS P P P+ S S S PPP +SS + L
Sbjct: 46 SSAPPSSLSPSSPPPL-SLSPSSPPPPPPSSSPLSSL 81
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 314 STASPSLQGPCWPAPVCSCSGSGLPPPGRASSGVXGL 204
S+A PS P P P+ S S S PPP +SS + L
Sbjct: 95 SSAPPSSLSPSSPPPL-SLSPSSPPPPPPSSSPLSSL 130
>At1g29150.1 68414.m03567 26S proteasome regulatory subunit,
putative (RPN6) similar to 19S proteosome subunit 9
GB:AAC34120 GI:3450889 from [Arabidopsis thaliana]
Length = 419
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 200 EEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXAL 343
+EVR L KL V+ DL+ ++KL + ++L + + LTA + A+
Sbjct: 152 KEVRRLDDKLLLVDIDLL--ESKLHFSLRNLPKAKAALTAARTAANAI 197
>At1g14740.1 68414.m01762 expressed protein
Length = 733
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +2
Query: 176 NLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXALNRKV 355
NLR N R+ ++ + EE+ NK+E N L + L+ T S R V
Sbjct: 113 NLREMNPNSSKRKAHEEEEEAEEEEDKKSNKIETLNLSLALPDVSLSLTASNAVKRPRVV 172
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 140 RADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNK---LEQANKDLEEK 301
RAD ++ +A E +++ E +KK Q++E L + K LE NK L ++
Sbjct: 1003 RADDAVRKFEEAQESLEDKKKKLEETEKKGQQLQESLTRMEEKCSNLESENKVLRQQ 1059
>At5g64870.1 68418.m08160 expressed protein
Length = 479
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 167 RDANL--RAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTA 319
R+A L + EK+N R + K + + + + K+++AN +L K+KQ A
Sbjct: 275 REAELQTKVEKMNALTRTEKLKAEFLSKASVEYETKVQEANWELYNKQKQAEA 327
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATES 328
E+ + L EKV + + ++KLA V E L + ++L ++ + E QL +S
Sbjct: 674 EESTKTQLLLQEKVVDVENDSKRKLADVSEALEIANSELSDKTSEVFQIEFQLWVWKS 731
>At4g35110.2 68417.m04989 expressed protein
Length = 386
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
Q D E+ + V+ +++L E DL+ + ++ + + +EE Q+ E+E
Sbjct: 305 QSQEDVENEKERHDGLVKAKREELEAQETDLVRMEKEVVEVKRRIEETRAQMVEIEAE 362
>At4g35110.1 68417.m04988 expressed protein
Length = 386
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2
Query: 158 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESE 331
Q D E+ + V+ +++L E DL+ + ++ + + +EE Q+ E+E
Sbjct: 305 QSQEDVENEKERHDGLVKAKREELEAQETDLVRMEKEVVEVKRRIEETRAQMVEIEAE 362
>At3g11590.1 68416.m01416 expressed protein
Length = 622
Score = 25.8 bits (54), Expect = 8.5
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +2
Query: 98 MQAMKLVEGQCHGTRA--DTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKL 271
M+A+K +E + C++ ARD + +K EV EL+++ +V+E++ + L
Sbjct: 347 MKAVKEIENEKRARVMVEKVCDELARD--ISEDKA--EVEELKRESFKVKEEVEKEREML 402
Query: 272 EQANKDLEEKEKQLTATESE 331
+ A+ L E+ Q+ +E++
Sbjct: 403 QLADA-LREERVQMKLSEAK 421
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = +2
Query: 155 EQQARDANLRAEKVNEEVRELQKKLAQVE------EDLILNKNKLEQANKDLEEKEKQLT 316
E + + +E++ +E ++ L Q+E ++ + + K+LEEKEK+L
Sbjct: 42 EDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELEEKEKELE 101
Query: 317 ATESEV 334
+ +V
Sbjct: 102 LKQRQV 107
>At2g48050.1 68415.m06014 expressed protein ; expression supported
by MPSS
Length = 1500
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 179 LRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATESEVXAL 343
L AE++ VRE +KK A+ E L ++ +A + ++ Q+ +SE+ L
Sbjct: 732 LEAEQIGAIVREQEKKAARKTEQL----QQIREAEEKKRQRNLQVEKMKSEMLNL 782
>At2g21230.1 68415.m02520 bZIP family transcription factor contains
a bZIP transcription factor basic domain signature
(PDOC00036)
Length = 519
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 140 RADTCEQQARDANLRAEKVNEEVRELQ 220
R EQQA+ + +EK+NEEV+ L+
Sbjct: 436 RLQAMEQQAQLRDALSEKLNEEVQRLK 462
>At1g13330.1 68414.m01547 expressed protein similar to nuclear
receptor coactivator GT198 (GI:16506273) {Rattus
norvegicus}; similar to TBP-1 interacting protein
(GI:7328534) [Homo sapiens]
Length = 226
Score = 25.8 bits (54), Expect = 8.5
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +2
Query: 149 TCEQQARDANLRAEKVNEEVRELQK-KLAQVEEDLILNKNKLEQANKD-------LEEKE 304
T Q+A D+ A K+ + QK +A+ ++ I N +L Q +D L+EK+
Sbjct: 40 TAVQKALDSLADAGKITFKEYGKQKIYIARQDQFEIPNSEELAQMKEDNAKLQEQLQEKK 99
Query: 305 KQLTATESEVXAL 343
K ++ ESE+ +L
Sbjct: 100 KTISDVESEIKSL 112
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,542,674
Number of Sequences: 28952
Number of extensions: 138423
Number of successful extensions: 932
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 459356736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -