Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32017
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 55 3e-08
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 55 3e-08
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 52 2e-07
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 50 1e-06
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 50 1e-06
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 45 4e-05
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 40 0.001
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 37 0.010
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 37 0.010
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 36 0.023
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 36 0.023
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 34 0.052
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 33 0.16
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 33 0.16
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 31 0.65
AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical ... 29 2.6
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 28 3.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical ... 28 3.4
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 27 6.0
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 54.8 bits (126), Expect = 3e-08
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2
Query: 113 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 259
NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDLRG
Sbjct: 87 NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRG 135
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 54.8 bits (126), Expect = 3e-08
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2
Query: 113 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 259
NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDLRG
Sbjct: 87 NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRG 135
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 98 NIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGXXXXX 274
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLRG
Sbjct: 97 DVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKP 156
Query: 275 XXXXXXXYXXXXXXXXXXXXXXXXRNQLKVXEKE 376
Y RN LKV +KE
Sbjct: 157 TLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKKE 190
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 98 NIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGXXXXX 274
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLRG
Sbjct: 97 DVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKP 156
Query: 275 XXXXXXXYXXXXXXXXXXXXXXXXRNQLKVXEKE 376
Y RN LKV +KE
Sbjct: 157 TLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKKE 190
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/54 (38%), Positives = 37/54 (68%)
Frame = +2
Query: 98 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 259
+IDD + ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VNDLRG
Sbjct: 88 SIDDKGQ--LEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVNDLRG 139
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/54 (38%), Positives = 37/54 (68%)
Frame = +2
Query: 98 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 259
+IDD + ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VNDLRG
Sbjct: 88 SIDDKGQ--LEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVNDLRG 139
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 98 NIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 259
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VNDLRG
Sbjct: 97 NVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVNDLRG 151
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 98 NIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 259
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VNDLRG
Sbjct: 97 NVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVNDLRG 151
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 98 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 241
N + + +K K+ H+RI +LE EK+DLE +R++ ++ +LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +2
Query: 89 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 241
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN +
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNER 175
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +2
Query: 89 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 241
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN +
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNER 279
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 125 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 241
+K K+ H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 125 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 241
+K K+ H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 98 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 232
N + + +K K+ H+RI +LE EK+DLE +R++ + L
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDPKQL 253
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 125 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 241
+K + H RI +LE EK+DLE +R+D ++ +L+ +
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHER 270
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 125 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 241
+K + H RI +LE EK+DLE +R+D ++ +L+ +
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHER 270
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 152 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 250
E I L K + E ++K+KD+E+S + S++ D
Sbjct: 1074 ELIEELNRHKHEQEQVIKKKDIELSSIQSRLED 1106
>AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical
protein T23B12.5 protein.
Length = 224
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 270 LXNLPLRSLTWEFRSEISISFLLTMYSRSNFXXXXXXXXXXXSLQTLLIVSSLASSMFLG 91
L NLPL + W F S S+ L + R + L+ L++SS+ ++FL
Sbjct: 39 LLNLPLERIFWNFLSLSSVPLQLFVVLR-QYMLTFSTSNKLQLLRITLVISSVFQTLFLT 97
Query: 90 L 88
L
Sbjct: 98 L 98
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 122 TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 247
T KR+ + YH I L++ + Y +KRK + + + ++N
Sbjct: 200 TTKRLMEHYHIEIDNLKEAHSEEMYKIKRKYSTLEEYSEEIN 241
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 104 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 232
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1072 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1114
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 104 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 232
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 104 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 232
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical
protein ZC190.5 protein.
Length = 311
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = -1
Query: 309 NLFSYLEX--FFSVGLXNLPLRSLTWEFRSEISI---SFLLTMYSRSNFXXXXXXXXXXX 145
++F YL ++++ LRS TWEF E + S + ++S +
Sbjct: 54 SIFEYLNSSKYYALTPEFATLRSKTWEFIHEFGVCLQSLSMLLFSMERYSAIRYPDFHAS 113
Query: 144 SLQTLLIVSSLASSMFLGL 88
+ +LI S+ S++FL L
Sbjct: 114 TTFVVLIYVSIVSAVFLAL 132
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 116 EDTIKRVCKDYHERIARLEDEKFDLEY 196
ED + R+C+ Y + + R+ + + +LEY
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY 697
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,391,741
Number of Sequences: 27780
Number of extensions: 130089
Number of successful extensions: 502
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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