Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32016
         (314 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    33   0.93 
UniRef50_Q4RK08 Cluster: Chromosome 9 SCAF15033, whole genome sh...    31   5.0  
UniRef50_Q12ZY2 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    30   8.7  
UniRef50_A2QA96 Cluster: Contig An01c0330, complete genome; n=6;...    30   8.7  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 273 RGGARYPIRPIVSR 314
           RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273


>UniRef50_Q4RK08 Cluster: Chromosome 9 SCAF15033, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 9 SCAF15033, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 464

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = -1

Query: 134 RWR*IRC-----SVLRYH*VQRTDGCVQNSDEHNTTQHRG 30
           RW  IRC     S+LR+    R DGC+ NS   NTT H G
Sbjct: 377 RWSFIRCHEHVWSLLRWD--TRLDGCILNSFCQNTTPHGG 414


>UniRef50_Q12ZY2 Cluster: Putative uncharacterized protein; n=1;
          Rhodopseudomonas palustris BisB5|Rep: Putative
          uncharacterized protein - Rhodopseudomonas palustris
          (strain BisB5)
          Length = 116

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 98 H*VQRTDGCVQNSDEHNTTQHRGHAA 21
          H  Q T G ++N D H T  H G+AA
Sbjct: 8  HRTQSTTGIMKNDDHHRTAAHTGNAA 33


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 312 DSL*GELGTGPPLE 271
           DSL GELGTGPPLE
Sbjct: 279 DSLYGELGTGPPLE 292


>UniRef50_A2QA96 Cluster: Contig An01c0330, complete genome; n=6;
           Trichocomaceae|Rep: Contig An01c0330, complete genome -
           Aspergillus niger
          Length = 617

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 112 QFSGITRYNVLTVAFRTRTSTTPHSTGVTRPP 17
           QFS   RYN +T +  TR +  P  T +  PP
Sbjct: 488 QFSSKPRYNTITTSVGTRRARLPEGTALIIPP 519


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,355,397
Number of Sequences: 1657284
Number of extensions: 3787321
Number of successful extensions: 7483
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7483
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)