BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32016 (314 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) 27 3.2 SB_46128| Best HMM Match : VQ (HMM E-Value=4.6) 27 4.2 SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2 SB_28298| Best HMM Match : IncA (HMM E-Value=0.32) 26 5.6 SB_58889| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6 SB_48943| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4 SB_36072| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4 SB_21432| Best HMM Match : IncA (HMM E-Value=0.44) 26 7.4 SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) 26 7.4 SB_27323| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8 >SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) Length = 352 Score = 27.1 bits (57), Expect = 3.2 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -2 Query: 106 SGITRYNVLTVAFRTRTSTTPHSTGVT 26 +GIT N++T A T TSTT + VT Sbjct: 294 NGITNTNIITTATTTTTSTTISTITVT 320 >SB_46128| Best HMM Match : VQ (HMM E-Value=4.6) Length = 333 Score = 26.6 bits (56), Expect = 4.2 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -2 Query: 97 TRYNVLTVAFRTRTSTTPHSTGVT 26 +RYN+ T +FR T+TT ST VT Sbjct: 270 SRYNIETASFRHATTTT-QSTSVT 292 >SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1104 Score = 26.6 bits (56), Expect = 4.2 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 23 PRDPGAVWCCARPSSERNRQYVVPSDT 103 P DPG++W PS E ++Y P DT Sbjct: 262 PNDPGSLWNFVSPSME--KRYGNPRDT 286 >SB_28298| Best HMM Match : IncA (HMM E-Value=0.32) Length = 225 Score = 26.2 bits (55), Expect = 5.6 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 Query: 118 DVQFSGITRYNVLTVAFRTRTSTTPHSTG 32 DV GI+ Y L A +TST P STG Sbjct: 5 DVSSGGISIYPPLPSAHPPQTSTAPASTG 33 >SB_58889| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 156 Score = 26.2 bits (55), Expect = 5.6 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = -2 Query: 142 IRIDGVRLDVQFSGITRYNVLTVAFRTRTSTTPHSTGVTRPPSCR 8 +R DG R ++F+GI + ++ F ++ P +T PP+ R Sbjct: 14 VRNDGTRPPIEFAGIDKLDICDYCFIEVMTSPPQAT----PPTVR 54 >SB_48943| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 158 Score = 25.8 bits (54), Expect = 7.4 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +2 Query: 11 ARGRPRDPGAVW 46 ARG P DPG VW Sbjct: 65 ARGNPADPGRVW 76 >SB_36072| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 498 Score = 25.8 bits (54), Expect = 7.4 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -2 Query: 106 SGITRYNVLTVAFRTRTSTTPHSTGVTRPPS 14 S I RY+ T + T TPH+T T PS Sbjct: 203 SHIARYSHYTQHYSHSTLRTPHATHTTHYPS 233 >SB_21432| Best HMM Match : IncA (HMM E-Value=0.44) Length = 225 Score = 25.8 bits (54), Expect = 7.4 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = -2 Query: 94 RYNVLTVAFRTRTSTTPHSTGVTRPPS 14 RYN L A R R PH R PS Sbjct: 175 RYNALKAAIRARHGLAPHDKKSGRGPS 201 >SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) Length = 423 Score = 25.8 bits (54), Expect = 7.4 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -1 Query: 119 RCSVLRYH*VQRTDGCVQNSDEHNTTQHRGHAAALV 12 R V+ H VQR + ++ +E QHR H +V Sbjct: 115 RMKVINSHKVQRMEQAKKHKEEIEKNQHRPHHIPIV 150 >SB_27323| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 225 Score = 25.4 bits (53), Expect = 9.8 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = -2 Query: 133 DGVRLDVQFSGITRYNVLTVAFRTRTSTTPHSTGVTRPPS 14 +G RL +Q RYN L A R R PH + PS Sbjct: 164 EGFRLILQEQ--ERYNALKAAIRARHGLAPHDKKSGKGPS 201 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,642,093 Number of Sequences: 59808 Number of extensions: 127705 Number of successful extensions: 353 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 323 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 353 length of database: 16,821,457 effective HSP length: 72 effective length of database: 12,515,281 effective search space used: 400488992 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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