Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32016
         (314 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             23   2.0  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         23   3.6  

>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 80 DGCVQNSDEHNTTQHRGHAAAL 15
          +GCV++ +EH      G+ A+L
Sbjct: 33 EGCVRSREEHARAGQEGNVASL 54


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 79  TVAFRTRTSTTPHSTGVTRPPSC 11
           TVA ++ T+TT      T PP C
Sbjct: 120 TVAPKSTTTTTTVKPTTTTPPPC 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,890
Number of Sequences: 2352
Number of extensions: 4338
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20748816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)