Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32015
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   3.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = -1

Query: 93  PHDGTGRTQPSISVSAVPQPCGQLRP 16
           P DGT   +P   +   P+P     P
Sbjct: 73  PSDGTTSPEPDPEIPVAPEPAPLASP 98


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 180 VVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQ 320
           VV+ E  LKS V  + +K +     LEL  ++ +    D  K  +KQ
Sbjct: 38  VVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCSEKQ 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,953
Number of Sequences: 336
Number of extensions: 1394
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)