Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32012
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 359 e-100
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 357 2e-99
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 357 2e-99
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 355 1e-98
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 355 1e-98
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 355 1e-98
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 355 1e-98
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 355 1e-98
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 355 1e-98
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 330 3e-91
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 275 1e-74
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 258 1e-69
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 194 2e-50
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 139 1e-33
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 132 1e-31
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 93 1e-19
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 85 2e-17
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 83 1e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 80 1e-15
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 44 5e-05
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 44 5e-05
At5g43500.2 68418.m05318 expressed protein 35 0.028
At5g43500.1 68418.m05319 expressed protein 35 0.028
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 1.9
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 1.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.9
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 4.3
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 5.7
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 7.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.5
At5g07730.1 68418.m00886 expressed protein 27 9.9
At3g28790.1 68416.m03593 expressed protein 27 9.9
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 359 bits (884), Expect = e-100
Identities = 166/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWD
Sbjct: 23 FAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWD 82
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 142
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 193
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 357 bits (878), Expect = 2e-99
Identities = 165/171 (96%), Positives = 169/171 (98%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWD
Sbjct: 23 FAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWD 82
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 142
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMK
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMK 193
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 357 bits (878), Expect = 2e-99
Identities = 165/171 (96%), Positives = 169/171 (98%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWD
Sbjct: 23 FAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWD 82
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 142
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMK
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMK 193
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 355 bits (873), Expect = 1e-98
Identities = 164/171 (95%), Positives = 168/171 (98%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWD
Sbjct: 23 FAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWD 82
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVL 142
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMK
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMK 193
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 355 bits (873), Expect = 1e-98
Identities = 164/171 (95%), Positives = 168/171 (98%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWD
Sbjct: 23 FAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWD 82
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVL 142
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMK
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMK 193
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 168/171 (98%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWD
Sbjct: 23 FAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWD 82
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVL 142
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMK
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMK 193
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 355 bits (872), Expect = 1e-98
Identities = 161/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWD
Sbjct: 23 FAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWD 82
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL
Sbjct: 83 DMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 142
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMK
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMK 193
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 355 bits (872), Expect = 1e-98
Identities = 161/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWD
Sbjct: 23 FAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWD 82
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL
Sbjct: 83 DMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 142
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMK
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMK 193
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 355 bits (872), Expect = 1e-98
Identities = 161/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWD
Sbjct: 23 FAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWD 82
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL
Sbjct: 83 DMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 142
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMK
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMK 193
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 330 bits (811), Expect = 3e-91
Identities = 146/171 (85%), Positives = 164/171 (95%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+++NWD
Sbjct: 24 FAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWD 83
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVL
Sbjct: 84 DMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVL 143
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
SLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL K
Sbjct: 144 SLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTK 194
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 275 bits (675), Expect = 1e-74
Identities = 125/171 (73%), Positives = 146/171 (85%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 182
FAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTLK P+EHGI+ NWD
Sbjct: 17 FAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWD 71
Query: 183 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 362
DMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL
Sbjct: 72 DMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVL 131
Query: 363 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++
Sbjct: 132 YLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIE 182
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 258 bits (633), Expect = 1e-69
Identities = 116/148 (78%), Positives = 135/148 (91%)
Frame = +3
Query: 72 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 251
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 252 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 431
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 432 PIYEGYALPHAILRLDLAGRDLTDYLMK 515
PIYEG ALPHAILRLDLAGR LT+YLMK
Sbjct: 121 PIYEGSALPHAILRLDLAGRHLTNYLMK 148
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 194 bits (474), Expect = 2e-50
Identities = 84/172 (48%), Positives = 120/172 (69%), Gaps = 2/172 (1%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITN 176
FAG++ P +VFP +VGRP R++ ++ KD VG+ R L + YP+ +GI+ N
Sbjct: 20 FAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQLDINYPVHNGIVQN 79
Query: 177 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQA 356
WDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE +N +++ IQA
Sbjct: 80 WDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQA 139
Query: 357 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 512
VL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+
Sbjct: 140 VLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLV 191
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 139 bits (336), Expect = 1e-33
Identities = 68/149 (45%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Frame = +3
Query: 93 DSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 263
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 264 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHT 428
+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHV 186
Query: 429 VPIYEGYALPHAILRLDLAGRDLTDYLMK 515
VP+ EGY + I + +AG+D+T ++ +
Sbjct: 187 VPVAEGYVIGSCIKSIPIAGKDVTLFIQQ 215
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 132 bits (320), Expect = 1e-31
Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 22/193 (11%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-------------YVGDEAQ 119
+AG+DAP+AVFPS++G M +DS YVG +A
Sbjct: 23 YAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTESEKEKSKRKLYVGSQAM 82
Query: 120 S-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 296
S +R + + PI+ GI+++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 83 SYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREK 142
Query: 297 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 476
++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L A++
Sbjct: 143 AAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSS 202
Query: 477 DLAGRDLTDYLMK 515
L G LTD L+K
Sbjct: 203 PLGGEFLTDCLLK 215
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 92.7 bits (220), Expect = 1e-19
Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +3
Query: 150 PIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 326
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 327 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 500
Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELT 174
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 85.4 bits (202), Expect = 2e-17
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 10/133 (7%)
Frame = +3
Query: 141 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 320
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 321 FNSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 470
F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 471 RLDLAGRDLTDYL 509
R+DL G+ T+YL
Sbjct: 181 RIDLGGKAFTNYL 193
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 82.6 bits (195), Expect = 1e-16
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL-----KYPIEHGI 167
+AG+ PR VF +IV RPRH+ G+ + VGD S + P + +
Sbjct: 35 WAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDCTRSGPRSPFDSNV 90
Query: 168 ITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 344
+ ++ ME I + F + +HP+L+TE NP +R KM +++FET+ PA+
Sbjct: 91 VYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYGVPAVAF 150
Query: 345 AIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 509
+ A S L+ + GIVL G +H++P +G + R ++ G +TDYL
Sbjct: 151 GVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYL 210
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 16/114 (14%)
Frame = +3
Query: 3 FAGDDAPRAVFPSIVGRPRHQGVMVG---------------MGQKDSYVGDEAQS-KRGI 134
+AG+DAP+AVFPS+VG G+ + G++ Y G +A + +R
Sbjct: 23 YAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNFRRDQ 82
Query: 135 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 296
+ + P + GI+T+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 83 MEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +3
Query: 207 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 356
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 357 VLSLYASGRTTGIVLDSGDGVSHTVPIYEG 446
VL+LYA+ RT+GIV++ G V +PI G
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +3
Query: 207 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 356
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 357 VLSLYASGRTTGIVLDSGDGVSHTVPIYEG 446
VL+LYA+ RT+GIV++ G V +PI G
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/90 (22%), Positives = 46/90 (51%)
Frame = +3
Query: 243 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 422
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 423 HTVPIYEGYALPHAILRLDLAGRDLTDYLM 512
V + +G +LP+ L G D+ L+
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLL 326
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/90 (22%), Positives = 46/90 (51%)
Frame = +3
Query: 243 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 422
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 423 HTVPIYEGYALPHAILRLDLAGRDLTDYLM 512
V + +G +LP+ L G D+ L+
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLL 338
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 302 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 195
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -2
Query: 314 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 189
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 108 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 287
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 288 REK 296
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 108 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 287
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 288 REK 296
REK
Sbjct: 225 REK 227
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -3
Query: 445 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 269
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 268 GASVSST---GCSSGAT 227
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 314 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 189
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +3
Query: 174 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 353
NW +E + + + P LL EA + PK+ E Q +++TF + + +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPK 553
Query: 354 AVLSLYASGRTTGIVLDSGD 413
+ +A G V D
Sbjct: 554 LSRTSFAISHYAGEVTYQAD 573
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 174 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 323
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At5g07730.1 68418.m00886 expressed protein
Length = 264
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 127 LLLWASSPT*ESFWPIPTITPWWRGRPTMDGKTARG 20
LL W S T SF+P+ I WW R K +G
Sbjct: 187 LLTWFSK-TIRSFYPVLAIAIWWWMRVRAPRKRVKG 221
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 418 SPTPYPSTKVTLCPTPSS 471
SPTP PST PTPS+
Sbjct: 278 SPTPTPSTPTPSTPTPST 295
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 378 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 515
G+T +V SG G S + + E Y P A L L GRDL Y ++
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLR 1230
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,434,520
Number of Sequences: 28952
Number of extensions: 240180
Number of successful extensions: 902
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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