Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32010
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor...   250   1e-65
UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA...    43   0.005
UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila pseudoobscu...    35   1.3  
UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gamb...    33   5.1  
UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-P...    32   6.8  
UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;...    32   8.9  

>UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor;
           n=1; Bombyx mori|Rep: Larval cuticle protein LCP-30
           precursor - Bombyx mori (Silk moth)
          Length = 239

 Score =  250 bits (612), Expect = 1e-65
 Identities = 123/171 (71%), Positives = 123/171 (71%)
 Frame = +3

Query: 3   LTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 182
           LTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN
Sbjct: 11  LTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 70

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEDLSKYLGDAYKGSSIXXXXXXXXXXXXXX 362
                                        KEDLSKYLGDAYKGSSI              
Sbjct: 71  GDRGDRGAAGGFYTGSGTAGGPGGAYVGTKEDLSKYLGDAYKGSSIVPLPVVKPTIPVPV 130

Query: 363 XXXXXASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYET 515
                ASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYET
Sbjct: 131 TPTYVASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYET 181


>UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 275

 Score = 42.7 bits (96), Expect = 0.005
 Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = +3

Query: 402 YVASKVVPPSGAGY--DYKYGIIRYDNDVAPEGYHYLYET 515
           YVA+ V   SGAGY  +  Y IIR +  V P+GYHY+YET
Sbjct: 158 YVATPV-QGSGAGYYDNRNYAIIRKEEQVEPDGYHYVYET 196



 Score = 31.9 bits (69), Expect = 8.9
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 141 NSGRYIPDNSGAYN 182
           N GRY PDNSGAYN
Sbjct: 25  NDGRYYPDNSGAYN 38


>UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila
           pseudoobscura|Rep: GA15599-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 264

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 453 YGIIRYDNDVAPEGYHYLYET 515
           + IIR ++DV  +GYHYLYET
Sbjct: 164 WAIIRLEDDVEQDGYHYLYET 184


>UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000023169 - Anopheles gambiae
           str. PEST
          Length = 232

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +3

Query: 387 VVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYET 515
           V T   +A   V P  A     + IIR +N V  +GYHY++ET
Sbjct: 151 VPTLARIAQVKVAPKPAYAPDGWKIIRLENQVENDGYHYVFET 193


>UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 259

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +3

Query: 453 YGIIRYDNDVAPEGYHYLYET 515
           + IIR ++DV  +GYHYL+ET
Sbjct: 159 WAIIRQEDDVEVDGYHYLWET 179


>UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 645

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 414 CWQRMWV*PPCWQRMWV*LAREW*ASRRAGEQCW 313
           CWQR+ V   CWQR+ V +   W  +   GE CW
Sbjct: 78  CWQRVGVEEECWQRV-VAVEESWQRAGVVGE-CW 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,008,188
Number of Sequences: 1657284
Number of extensions: 6879951
Number of successful extensions: 20993
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20926
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)