BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32009 (516 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to vil... 173 8e-44 At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to vil... 169 1e-42 At5g57320.1 68418.m07160 villin, putative similar to villin 2 (V... 166 9e-42 At4g30160.1 68417.m04289 villin, putative similar to villin 2 (... 162 1e-40 At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to vil... 100 7e-22 At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes... 29 1.9 At2g33420.1 68415.m04096 expressed protein 29 2.5 At5g45610.1 68418.m05605 expressed protein 28 3.2 At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family ... 28 3.2 At5g10520.1 68418.m01218 protein kinase family protein contains ... 28 4.3 At5g29613.1 68418.m03639 hypothetical protein 27 5.7 At3g23270.1 68416.m02933 regulator of chromosome condensation (R... 27 5.7 At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 27 7.5 At1g13770.1 68414.m01616 expressed protein contains Pfam domain,... 27 7.5 At3g53320.1 68416.m05883 expressed protein 27 9.9 At3g02750.1 68416.m00267 protein phosphatase 2C family protein /... 27 9.9 >At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to villin 2 (VLN2) [Arabidopsis thaliana] GI:3415115 Length = 976 Score = 173 bits (420), Expect = 8e-44 Identities = 92/160 (57%), Positives = 108/160 (67%), Gaps = 1/160 (0%) Frame = +1 Query: 40 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWDIHFWLG 216 AF AG+KPG EIWRIENFE V VPK++ G FY GD+YIVL TT +K +DIHFW+G Sbjct: 9 AFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIG 68 Query: 217 SRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGF 396 TSQDEAG AA+ TV L D G AVQHRE+Q +ES +FL YF P I L+GG ASGF Sbjct: 69 KDTSQDEAGTAAVKTVEL-DAVLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGF 127 Query: 397 SHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCF 516 V E E RL+ KGKR +R+KQV SLN+ D F Sbjct: 128 KTVE-EEVFETRLYTCKGKRAIRLKQVPFARSSLNHDDVF 166 Score = 64.1 bits (149), Expect = 5e-11 Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 11/160 (6%) Frame = +1 Query: 70 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRL-TWDIHFWLGSRTSQDEAGA 246 LE+W + +PK G YSGD Y+VL T +R + + W G ++ ++ Sbjct: 392 LEVWYVNGKVKTPLPKEDIGKLYSGDCYLVLYTYHSGERKDEYFLSCWFGKKSIPEDQD- 450 Query: 247 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGF-SHVTINEGT 423 AI N +G VQ R + E +F+ F P + LKGG +SG+ S + +E T Sbjct: 451 TAIRLANTMSNSLKGRPVQGRIYEGKEPPQFVALFQPMV-VLKGGLSSGYKSSMGESEST 509 Query: 424 EK-------RLFQIKGK--RNVRVKQVKPTFESLNNGDCF 516 ++ L Q+ G N + QV+ SLN+ +CF Sbjct: 510 DETYTPESIALVQVSGTGVHNNKAVQVETVATSLNSYECF 549 >At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to villin 3 (VLN3) [Arabidopsis thaliana] GI:3415117 Length = 965 Score = 169 bits (411), Expect = 1e-42 Identities = 90/160 (56%), Positives = 106/160 (66%), Gaps = 1/160 (0%) Frame = +1 Query: 40 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWDIHFWLG 216 AF G+KPG EIWRIENFEPV VPK++ G FY GD+YIVL TT +K +DIHFW+G Sbjct: 11 AFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIG 70 Query: 217 SRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGF 396 TSQDEAG AA+ TV L D G AVQ+RE+Q +ES +FL YF P I L+GG ASGF Sbjct: 71 KDTSQDEAGTAAVKTVEL-DAALGGRAVQYREIQGHESDKFLSYFKPCIIPLEGGVASGF 129 Query: 397 SHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCF 516 E E RL+ KGKR V +KQV SLN+ D F Sbjct: 130 KKPE-EEEFETRLYTCKGKRAVHLKQVPFARSSLNHDDVF 168 Score = 61.3 bits (142), Expect = 4e-10 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 11/160 (6%) Frame = +1 Query: 70 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRL-TWDIHFWLGSRTSQDEAGA 246 LE+W I+ + K G YSGD Y+VL T +R + + W G ++Q++ Sbjct: 394 LEVWYIDANSKTVLSKDHVGKLYSGDCYLVLYTYHSGERKEDYFLCCWFGKNSNQEDQET 453 Query: 247 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTE 426 A L + + +G VQ R + E +F+ F + LKGG +SG+ + +G+ Sbjct: 454 AVRLASTMTN-SLKGRPVQARIFEGKEPPQFVALFQHMV-VLKGGLSSGYKNSMTEKGSS 511 Query: 427 KR--------LFQIKGK--RNVRVKQVKPTFESLNNGDCF 516 L Q+ G N + QV+ SLN+ DCF Sbjct: 512 GETYTPESIALIQVSGTGVHNNKALQVEAVATSLNSYDCF 551 >At5g57320.1 68418.m07160 villin, putative similar to villin 2 (VLN2) [Arabidopsis thaliana] GI:3415115, villin 3 (VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam profiles PF00626: Gelsolin repeat, PF02209: Villin headpiece domain Length = 962 Score = 166 bits (403), Expect = 9e-42 Identities = 87/166 (52%), Positives = 112/166 (67%), Gaps = 1/166 (0%) Frame = +1 Query: 22 MPEVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKD-RLTWD 198 M ++ QA AG+K G+EIWRIENF+PV VP+ G F++GDSYIVL TT + L D Sbjct: 5 MRDLDQALQGAGQKSGIEIWRIENFKPVTVPQESHGKFFTGDSYIVLKTTASRSGSLHHD 64 Query: 199 IHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKG 378 IH+WLG +SQDEAGA A++TV L D G AVQ+REVQ +E+++FL YF P I +G Sbjct: 65 IHYWLGKDSSQDEAGAVAVMTVEL-DSALGGRAVQYREVQGHETEKFLSYFKPCIIPQEG 123 Query: 379 GHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCF 516 G ASGF+HV E + RL+ KGK VRVK+V +LN+ D F Sbjct: 124 GVASGFNHVKPEE-HQTRLYICKGKHVVRVKEVPFVRSTLNHEDVF 168 Score = 48.4 bits (110), Expect = 3e-06 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%) Frame = +1 Query: 70 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGSRTSQDEAGAA 249 L++WRI E + + + FYSGD YI+ + +DR + W G + S +E A+ Sbjct: 396 LQVWRINCEEKILLEAAEQSKFYSGDCYILQYSYPGEDREEHLVGTWFG-KQSVEEDRAS 454 Query: 250 AILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHV-------- 405 AI N E + Q R + E +F I + KGG + F Sbjct: 455 AISLANKMVESMKFVPAQARINEGKEPIQFFVIMQSFITF-KGGVSDAFKKYIAENDIPD 513 Query: 406 TINEGTEKRLFQIKGK--RNVRVKQVKPTFESLNNGDCF 516 T E LF+++G N++ Q++ LN+ C+ Sbjct: 514 TTYEAEGVALFRVQGSGPENMQAIQIEAASAGLNSSHCY 552 >At4g30160.1 68417.m04289 villin, putative similar to villin 2 (VLN2) [Arabidopsis thaliana] GI:3415115, villin 3 (VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam profiles PF00626: Gelsolin repeat, PF02209: Villin headpiece domain Length = 974 Score = 162 bits (394), Expect = 1e-40 Identities = 87/166 (52%), Positives = 107/166 (64%), Gaps = 1/166 (0%) Frame = +1 Query: 22 MPEVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWD 198 M ++ AF AG+K G+EIWRIENF P +PK+ G F++GDSYIVL TT K L D Sbjct: 5 MRDLDPAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLKTTALKTGALRHD 64 Query: 199 IHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKG 378 IH+WLG TSQDEAG AA+ TV L D G AVQ+REVQ +E+++FL YF P I +G Sbjct: 65 IHYWLGKDTSQDEAGTAAVKTVEL-DAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEG 123 Query: 379 GHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCF 516 G ASGF HV E RLF +GK V VK+V SLN+ D + Sbjct: 124 GVASGFKHVVAEEHI-TRLFVCRGKHVVHVKEVPFARSSLNHDDIY 168 Score = 50.8 bits (116), Expect = 5e-07 Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 12/171 (7%) Frame = +1 Query: 28 EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHF 207 E Q F D L++WR+ + FYSGD Y+ + +++ I Sbjct: 382 EEPQVFIDC--TGNLQVWRVNGQAKTLLQAADHSKFYSGDCYVFQYSYPGEEKEEVLIGT 439 Query: 208 WLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF--SPAIRYLKGG 381 W G ++ ++E G+A V++ + + + + YE KE +++F + KGG Sbjct: 440 WFGKQSVEEERGSA----VSMASKMVESMKFVPAQARIYEGKEPIQFFVIMQSFIVFKGG 495 Query: 382 HASGF----SHVTINEGTEKR----LFQIKGK--RNVRVKQVKPTFESLNN 504 +SG+ + +++ T LF+I+G N++ QV P SLN+ Sbjct: 496 ISSGYKKYIAEKEVDDDTYNENGVALFRIQGSGPENMQAIQVDPVAASLNS 546 >At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to villin 1 (VLN1) [Arabidopsis thaliana] GI:3415113 Length = 909 Score = 100 bits (239), Expect = 7e-22 Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 1/164 (0%) Frame = +1 Query: 28 EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWDIH 204 ++ AF G K GLEIW + N + +++PK+ FG F+SG++Y+VL T K + +DIH Sbjct: 7 DIDSAFQGVGTKSGLEIWCVYNKQLISIPKSSFGKFHSGNAYLVLRTFLRKIESPQYDIH 66 Query: 205 FWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGH 384 +WLG ++ ++ A+ ++L D VQ+REVQ E+++FL YF P I ++G + Sbjct: 67 YWLGIDANEVDSILASDKALDL-DAALGCCTVQYREVQGQETEKFLSYFKPCIIPVEGKY 125 Query: 385 ASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCF 516 + E + L + KG VRVK+V SLN+ D F Sbjct: 126 SPKTG--IAGETYQVTLLRCKGDHVVRVKEVPFLRSSLNHDDVF 167 Score = 32.7 bits (71), Expect = 0.15 Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 10/158 (6%) Frame = +1 Query: 61 KPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGSRTSQDEA 240 + L++WR++ + + ++GD Y+V K+R ++ W+G + Q + Sbjct: 388 RDNLKVWRVDGDDVSLLSIPDQTKLFTGDCYLVQYKYTYKERTEHLLYVWIGCESIQQDR 447 Query: 241 GAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINE- 417 A AI + +G +V Q E F F + + KGG + + + + Sbjct: 448 -ADAITNASAIVGTTKGESVLCHIYQGNEPSRFFPMFQSLVVF-KGGLSRRYKVLLAEKE 505 Query: 418 --GTE-----KRLFQIKG--KRNVRVKQVKPTFESLNN 504 G E LF++ G RN++ QV SLN+ Sbjct: 506 KIGEEYNENKASLFRVVGTSPRNMQAIQVNLVATSLNS 543 >At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes from this gene Length = 1035 Score = 29.1 bits (62), Expect = 1.9 Identities = 25/86 (29%), Positives = 38/86 (44%) Frame = +2 Query: 62 SRVSKYGGLRTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPARTKP 241 SRV + GL+ RSP RR+S+V + G + +P ++ G+ G P Sbjct: 107 SRVKRALGLKMLKRSPSRRMSTVGTVVGAVSAPSSPGNNGSIGSGSGHFSPGAGFFTVPP 166 Query: 242 ARRPSSR*TWTTNNSRDQRYSTERSN 319 AR R + R Q TE+S+ Sbjct: 167 AR--PRRPLTSAEIMRQQMKVTEQSD 190 >At2g33420.1 68415.m04096 expressed protein Length = 1039 Score = 28.7 bits (61), Expect = 2.5 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 62 SRVSKYGGLRTSNRSPFRRLSSVSSTPGTPT 154 SRV + GL+ RSP RR+S++ + G T Sbjct: 113 SRVKRALGLKMLKRSPSRRMSTIGAAGGAAT 143 >At5g45610.1 68418.m05605 expressed protein Length = 633 Score = 28.3 bits (60), Expect = 3.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -1 Query: 138 VEETELSLRNGDRFEVLNPPYFETRLPA 55 ++ E +L+ D + L PPY T LPA Sbjct: 16 IDSIETTLKKADMYRPLPPPYLPTFLPA 43 >At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family protein / PEP carboxylase family protein similar to SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile PF00311: phosphoenolpyruvate carboxylase Length = 1032 Score = 28.3 bits (60), Expect = 3.2 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +1 Query: 277 EQFQGSAVQHREVQYYESKEFLEYFSPA 360 E+ G + QH YE+ EFL YF A Sbjct: 812 EEISGISCQHYRSTVYENPEFLSYFHEA 839 >At5g10520.1 68418.m01218 protein kinase family protein contains protein kinase domain, INTERPRO:IPR000719 Length = 467 Score = 27.9 bits (59), Expect = 4.3 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +1 Query: 307 REVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 423 R Y E +YF+P KGGHA + V IN T Sbjct: 139 RNFTYEELAVATDYFNPENMIGKGGHAEVYKGVLINGET 177 >At5g29613.1 68418.m03639 hypothetical protein Length = 117 Score = 27.5 bits (58), Expect = 5.7 Identities = 16/63 (25%), Positives = 29/63 (46%) Frame = +1 Query: 268 LDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQIK 447 LD Q Q H + ++ + F E F + A+G + + + +GT+ R +I Sbjct: 21 LDGIQTQNGLQHHMSYKKFKDETF-EEFDDLKMVFEDNIATGGNAIGLGDGTDARTCEIA 79 Query: 448 GKR 456 GK+ Sbjct: 80 GKK 82 >At3g23270.1 68416.m02933 regulator of chromosome condensation (RCC1) family protein contains Pfam domain PF00415: Regulator of chromosome condensation (RCC1); similar to zinc finger protein (GI:15811367) [Arabidopsis thaliana]; similar to chromosome condensation regulator protein (GI:22770461) [Cicer arietinum] Length = 1045 Score = 27.5 bits (58), Expect = 5.7 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -2 Query: 104 TGSKFSILHISRPGFLPASANA 39 + +K S++ SRPGF P S+NA Sbjct: 701 SANKNSVMSSSRPGFTPESSNA 722 >At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat family protein similar to WD-repeat protein 9 (SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD domain, G-beta repeat (4 copies) Length = 1677 Score = 27.1 bits (57), Expect = 7.5 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -2 Query: 113 GTATGSKFSILHISRPGFLPASANAW-CTSGIL 18 G A GSKFS+ S+ +P N+W C I+ Sbjct: 457 GCAAGSKFSVTDYSKDENVPKFKNSWFCHDNIV 489 >At1g13770.1 68414.m01616 expressed protein contains Pfam domain, PF04884: Protein of unknown function, DUF647; contains non-consensus (GC) splice site at intron 2 Length = 440 Score = 27.1 bits (57), Expect = 7.5 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 299 TADPWNCSSSKFTVRMAAAPASSWLVLEPSQKWMSHV-RRSLSPVV 165 T + WN SSS + A ASS L ++ S +HV RR L V Sbjct: 13 TLEEWNGSSSTKLFKTATITASSSLSIQRSANRFNHVWRRVLQAFV 58 >At3g53320.1 68416.m05883 expressed protein Length = 553 Score = 26.6 bits (56), Expect = 9.9 Identities = 15/48 (31%), Positives = 28/48 (58%) Frame = +2 Query: 191 HGTSISGSARGPARTKPARRPSSR*TWTTNNSRDQRYSTERSNITSPR 334 HG+S S S + +T+PAR P +TN+ + S++ +++SP+ Sbjct: 494 HGSSSSASKKSGGKTQPARSPIQE---STNSK--SKASSKVVSVSSPK 536 >At3g02750.1 68416.m00267 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2C; PP2C (GI:3643088) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; Length = 492 Score = 26.6 bits (56), Expect = 9.9 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Frame = +1 Query: 25 PEVHQAFADAGRKPGLEIWR------IENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDR 186 PEV + + PGL + R +++F ++VP F D +IVL T G D Sbjct: 284 PEVCRVWLPNCDSPGLAMARAFGDFCLKDFGLISVPDVSFRQLTEKDEFIVLATDGIWDV 343 Query: 187 LT-WDIHFWLGSRTSQDEAGAAAI 255 L+ D+ + S S+ A A + Sbjct: 344 LSNEDVVAIVASAPSRSSAARALV 367 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,612,302 Number of Sequences: 28952 Number of extensions: 240072 Number of successful extensions: 763 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 727 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 746 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 937669760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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