Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32002
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.92 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   3.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 4   FFFFITHLLIYCLLSLTNKLY 66
           F  F  HLL YC+L +   +Y
Sbjct: 219 FIIFTIHLLFYCVLIILLCIY 239



 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 6   FFFYYTFINLLFV 44
           ++FYY FI LL V
Sbjct: 101 YYFYYAFIILLCV 113


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory
          receptor candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 7  FFFITHLLIYCLLSLT 54
          FF + HLLI C ++++
Sbjct: 40 FFAVEHLLIQCYIAVS 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,264
Number of Sequences: 336
Number of extensions: 2515
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)