Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32002
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 33 0.18
02_05_0795 - 31792231-31794780 32 0.31
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 1.7
12_02_0434 + 19025539-19026027,19026474-19027553 29 2.9
07_01_0526 - 3913713-3913881,3914505-3914677 29 2.9
04_03_0904 + 20717005-20718087 28 3.9
04_01_0146 + 1701744-1701860,1702036-1702112,1702247-1702344,170... 28 3.9
03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621 28 3.9
05_05_0173 + 22956927-22958615 28 5.1
03_01_0092 - 731069-731434,731569-733080 28 5.1
11_06_0330 - 22401751-22402221 27 6.8
02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608 27 6.8
11_06_0667 + 26071774-26072070,26072352-26073153,26073209-260734... 27 8.9
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 27 8.9
05_03_0110 + 8500204-8500460,8502544-8502612,8502725-8502790,850... 27 8.9
04_04_0673 - 27168305-27168874,27168977-27169099,27169180-271694... 27 8.9
04_03_1022 - 21778315-21779007 27 8.9
02_04_0536 + 23730396-23731736 27 8.9
>03_02_0400 -
8135283-8135490,8136047-8136213,8136289-8136477,
8136560-8136655,8136746-8136874,8136947-8137123,
8137256-8137366,8138592-8138792,8139022-8139186,
8139293-8139527,8139618-8139745,8139833-8139928,
8140017-8140112,8140252-8140325,8140393-8140462,
8140556-8140665,8140753-8140906,8141040-8141155,
8141259-8141379,8141464-8141641,8142331-8142489,
8142619-8142732,8142821-8143000,8143098-8143177
Length = 1117
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 456 APDGTPIQITYIADANGYQPSGAHLPTTPAPLPIP 352
+P P+ + I G+ P GAH P PAP P+P
Sbjct: 214 SPANNPL-LGSIPKPGGFPPLGAHAPFQPAPTPVP 247
>02_05_0795 - 31792231-31794780
Length = 849
Score = 31.9 bits (69), Expect = 0.31
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 507 EGREDASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAP 364
EG A+ ++G +GY A D P++ +A +P PT+ AP
Sbjct: 47 EGAAAAAGTIEGEAGYAAADADPMEDEAADEAGAAEPMEDDPPTSSAP 94
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 420 ADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRTHPPKP 301
A ++ P + +T APLP P + E++ HPP P
Sbjct: 48 ASSSSSSPPPSSSASTAAPLPAPPTPSPVPEHLHHHPPPP 87
>12_02_0434 + 19025539-19026027,19026474-19027553
Length = 522
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 345 IARAIEYIRTHPPKPEVGQRI 283
++RAIEY+ THP +P + + I
Sbjct: 334 VSRAIEYLHTHPTRPVIHRDI 354
>07_01_0526 - 3913713-3913881,3914505-3914677
Length = 113
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -1
Query: 516 LVNEGREDASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPLPIPDYIAR 337
L EG +DA + Q S+ + G I + A +GAH P IP Y R
Sbjct: 44 LAGEGWDDA-VEPQSSTSHIVLSGLRINLNLTAATADPAKTGAHDVRLAPPPYIPQYNER 102
Query: 336 AI-EYIRTH 313
+ EY R H
Sbjct: 103 SYHEYWREH 111
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 420 ADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRTHPPKPE 298
ADA GY PT P P P+ + + H PKPE
Sbjct: 22 ADAGGYGGGYTPTPTPVKPAPKPEKPPKEHKPPHHHEPKPE 62
>04_01_0146 +
1701744-1701860,1702036-1702112,1702247-1702344,
1704073-1704228,1704671-1705290,1705397-1705458,
1705551-1705941,1706404-1706575,1706686-1707212
Length = 739
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 408 RWRQQCK*FEWEYHQGQCSRLNLGRRWMHPH 500
+W+ QC+ E + QC+R +G RW H
Sbjct: 169 KWKGQCQAGE-AFRSNQCNRKIIGARWYDKH 198
>03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621
Length = 388
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -1
Query: 420 ADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRTHPPKP 301
A + PS AH P P P P+ R + HPP P
Sbjct: 160 APTSAAPPSPAHAPELKKPPPPPEAHHRPTKSYTGHPPPP 199
>05_05_0173 + 22956927-22958615
Length = 562
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = -1
Query: 405 YQPSG--AHLPTTPAPLPIPDYI---ARAIEYIRTHPP 307
Y PS AH P P P+P P+ I A +E+ +HPP
Sbjct: 86 YDPSAPEAHPPYVPPPVPPPEAIPELADDLEFGFSHPP 123
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -1
Query: 480 VQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPLPI-PDYIARAIEYIRTHPPK 304
V G S P P+Q T +A A P H TP P+ + P +I + PP+
Sbjct: 225 VTGQSIAAVPP-PPLQPTPVASAAPPPPPQHHHQQTPPPIQVQPHHIMPMTPQPQLQPPQ 283
Query: 303 PE 298
P+
Sbjct: 284 PQ 285
>11_06_0330 - 22401751-22402221
Length = 156
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 381 PTTPAPLPIPDYIARAIEYIRTHPPKPE 298
P P+P DYIA + R PPKPE
Sbjct: 39 PAGKVPMP-DDYIATILSLKREPPPKPE 65
>02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608
Length = 375
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 293 PTSGLGG*VLMYSMAR-AM*SGIGRGAGVVGRWAPEGWYP 409
P G GG L +A A G R VVG W PE W P
Sbjct: 48 PLPGAGGLPLFCQLAAVAACGGERRRLVVVGGWDPETWAP 87
>11_06_0667 +
26071774-26072070,26072352-26073153,26073209-26073411,
26075078-26075521,26075703-26075758,26076323-26076402,
26077098-26077174,26077279-26078301
Length = 993
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 345 IARAIEYIRTHPPKPEVGQRI 283
+ RAI+Y+ THP +P + + I
Sbjct: 283 VCRAIDYLHTHPTRPVIHRDI 303
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -1
Query: 459 TAPDGTPIQITYIADANGYQPSGAHLPTTPAPLPI----PDYIARAIEYIRTHP 310
T+P+ +P +Y + Y PS A+ P++P P P+Y + Y T P
Sbjct: 1735 TSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSP 1788
>05_03_0110 +
8500204-8500460,8502544-8502612,8502725-8502790,
8502885-8502963,8504270-8504390,8504486-8504581,
8505403-8505515,8505612-8505689,8507777-8507893,
8508194-8508293,8508463-8508563,8509093-8509110
Length = 404
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 3 FFFFYYTFINLLFVKLNK*TLFANFQEP 86
FFFF + F+N++F LNK +F F P
Sbjct: 104 FFFFMWYFLNVIFNILNK-KIFDYFPYP 130
>04_04_0673 -
27168305-27168874,27168977-27169099,27169180-27169440,
27169723-27169970,27170403-27170483,27171530-27171902
Length = 551
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 510 NEGREDASIAVQGSSGYTAPD 448
+EG+ S AV G+ GY APD
Sbjct: 353 SEGQTHVSTAVMGTYGYAAPD 373
>04_03_1022 - 21778315-21779007
Length = 230
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 399 PSGAHLPTTPAPLPIPDYIARAIEYIRTHPPKP 301
P H P TPAP P P HPP P
Sbjct: 66 PPNYHPPHTPAPAPAPGPYIPPHHPHHHHPPTP 98
>02_04_0536 + 23730396-23731736
Length = 446
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -1
Query: 453 PDGTPIQITYIADANGYQPSGAHLPTTPA--PLPIP 352
P P+ + +AD Y HLP P PLP+P
Sbjct: 99 PGFPPLPVPGLADEPVYAAPARHLPPPPGFPPLPVP 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,895,289
Number of Sequences: 37544
Number of extensions: 263120
Number of successful extensions: 899
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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