Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32001
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 337 3e-93
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 337 3e-93
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 337 3e-93
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 337 3e-93
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 337 3e-93
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 337 3e-93
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 336 5e-93
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 336 5e-93
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 336 5e-93
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 330 3e-91
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 315 1e-86
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 164 4e-41
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 158 3e-39
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 6e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 105 2e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 97 5e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 77 1e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 2.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 6.0
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 8.0
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 337 bits (828), Expect = 3e-93
Identities = 156/166 (93%), Positives = 163/166 (98%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 337 bits (828), Expect = 3e-93
Identities = 156/166 (93%), Positives = 163/166 (98%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 337 bits (828), Expect = 3e-93
Identities = 156/166 (93%), Positives = 163/166 (98%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 337 bits (828), Expect = 3e-93
Identities = 156/166 (93%), Positives = 163/166 (98%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 167 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 226
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 227 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 286
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 287 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 337 bits (828), Expect = 3e-93
Identities = 156/166 (93%), Positives = 163/166 (98%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 197 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 256
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 257 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 316
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 317 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 337 bits (828), Expect = 3e-93
Identities = 156/166 (93%), Positives = 163/166 (98%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 336 bits (826), Expect = 5e-93
Identities = 155/166 (93%), Positives = 163/166 (98%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 336 bits (826), Expect = 5e-93
Identities = 155/166 (93%), Positives = 163/166 (98%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 336 bits (826), Expect = 5e-93
Identities = 155/166 (93%), Positives = 163/166 (98%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 330 bits (811), Expect = 3e-91
Identities = 154/166 (92%), Positives = 162/166 (97%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAP T+KIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKI 329
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 330 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 315 bits (773), Expect = 1e-86
Identities = 145/166 (87%), Positives = 155/166 (93%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
RDIKEKLCYVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GM
Sbjct: 210 RDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGM 269
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
E GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI LAPST+KIKI
Sbjct: 270 EGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKI 329
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 330 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 164 bits (398), Expect = 4e-41
Identities = 78/166 (46%), Positives = 108/166 (65%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
R++KE CY+ALD T + S++ SY LPD I I N FR PE LF+P +G
Sbjct: 214 REMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGT 268
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 361
E G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+ KI+I
Sbjct: 269 EWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRI 328
Query: 362 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 499
A ER WIGGSI+ASL TF++MW+ K+EY++ G +H++ F
Sbjct: 329 SASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 158 bits (383), Expect = 3e-39
Identities = 78/170 (45%), Positives = 106/170 (62%), Gaps = 13/170 (7%)
Frame = +2
Query: 2 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 181
R +KEKLCY+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP + +
Sbjct: 214 RQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINV 273
Query: 182 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL--------- 334
E G+ E ++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 274 EKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGN 333
Query: 335 --APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKEEYDESG 472
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 334 TDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (289), Expect = 6e-28
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = +2
Query: 92 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 256
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 257 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 427
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 428 FQQMWISKEEYDESGPGIVHRKC 496
FQQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 105 bits (251), Expect = 2e-23
Identities = 50/151 (33%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Frame = +2
Query: 14 EKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGME 184
E+ YV D+++E + T SL+ P Q I N RF C E LF+P G++
Sbjct: 389 EQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLD 448
Query: 185 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 364
+ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA+++++E++ + P+TI ++
Sbjct: 449 TKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVN 508
Query: 365 APPERKYSVWIGGSILASLSTFQQMWISKEE 457
P R + ++G I+AS STF+ IS ++
Sbjct: 509 ISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 97.5 bits (232), Expect = 5e-21
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 25/183 (13%)
Frame = +2
Query: 8 IKEKLCYVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCPEALFQ 163
IKEK CYV D +E T K DG IT +G ERF PE F
Sbjct: 234 IKEKFCYVCPDVMKEFVKY--DTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFH 291
Query: 164 PSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA- 337
P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++ L+
Sbjct: 292 PEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSD 351
Query: 338 ---------------PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 472
P I +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E G
Sbjct: 352 GRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERG 411
Query: 473 PGI 481
P I
Sbjct: 412 PSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 76.6 bits (180), Expect = 1e-14
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 25/184 (13%)
Frame = +2
Query: 5 DIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------------I 118
+ KE LC+V+ +F++ M A + K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 119 TIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 298
+G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +PG
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPG 323
Query: 299 IADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDES 469
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 324 FRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDER 379
Query: 470 GPGI 481
G +
Sbjct: 380 GDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 76.6 bits (180), Expect = 1e-14
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 25/184 (13%)
Frame = +2
Query: 5 DIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------------I 118
+ KE LC+V+ +F++ M A + K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 119 TIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 298
+G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +PG
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPG 323
Query: 299 IADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDES 469
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 324 FRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDER 379
Query: 470 GPGI 481
G +
Sbjct: 380 GDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 4e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = +2
Query: 206 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 370
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 371 PERK----YSVWIGGSILASL-STFQQMWISKEEY 460
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 193 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 336
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 292 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 390
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = +1
Query: 217 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 396
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 397 RWIHPG 414
H G
Sbjct: 487 HGTHHG 492
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 334 RALDHQDQDHRSPREEVLRMDRW 402
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 334 RALDHQDQDHRSPREEVLRMDRW 402
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,057,659
Number of Sequences: 27780
Number of extensions: 208885
Number of successful extensions: 708
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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