Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31994
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    36   0.017
U61950-2|AAC24286.1|  266|Caenorhabditis elegans Hypothetical pr...    31   0.65 
U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    31   0.65 
AC084153-14|AAK84588.1|  264|Caenorhabditis elegans Hypothetical...    29   1.5  
U61950-3|AAC24288.1|  469|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z70035-4|CAA93864.2|  410|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical protein
            C25A8.4 protein.
          Length = 1067

 Score = 35.9 bits (79), Expect = 0.017
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = -2

Query: 371  FRXKAAYVKSKNLGGVAIVXLSLDDFXGLCXGXKYPXLRA 252
            FR K  Y++ + LGG+A+  ++ DD+ G+C    +P L++
Sbjct: 1021 FRYKIGYIQREQLGGIAL-NVNGDDYTGICGRGSFPILKS 1059


>U61950-2|AAC24286.1|  266|Caenorhabditis elegans Hypothetical
           protein C45E5.3 protein.
          Length = 266

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -2

Query: 362 KAAYVKSKNLGGVAIVXLSLDD 297
           KA YVKSKNLGGV I  +  DD
Sbjct: 213 KANYVKSKNLGGVWIWTMEHDD 234


>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
 Frame = -2

Query: 374 TFRXKAAYVKSKNLGGVAIVXLSLDDFXGLC---XGXKYPXLRAXKXRL*NIL 225
           +F  K AYVK +  GG  +  L  DDF   C    G  YP +      L  ++
Sbjct: 375 SFANKMAYVKREGYGGAFVWTLDFDDFNAGCSNSNGQLYPLISVIAKELGGVI 427


>AC084153-14|AAK84588.1|  264|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.14 protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 362 KAAYVKSKNLGGVAIVXLSLDDFXGLCXGXKYPXL 258
           K A+ +   +GGV +  +  DD  G C    YP L
Sbjct: 221 KMAFARKLQVGGVMVFSIGSDDVTGKCGHGPYPLL 255


>U61950-3|AAC24288.1|  469|Caenorhabditis elegans Hypothetical
           protein C45E5.2 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -2

Query: 362 KAAYVKSKNLGGVAIVXLSLDD 297
           KA YVKS NLGGV I  +  DD
Sbjct: 323 KANYVKSMNLGGVWIWLMENDD 344


>Z70035-4|CAA93864.2|  410|Caenorhabditis elegans Hypothetical
           protein R09D1.4 protein.
          Length = 410

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 362 KAAYVKSKNLGGVAIVXLSLDD 297
           K  YV +KNLGGV I  + +DD
Sbjct: 356 KIEYVMNKNLGGVWIWSVDMDD 377


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,380,621
Number of Sequences: 27780
Number of extensions: 71192
Number of successful extensions: 90
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)