Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31987
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 45 4e-05
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 38 0.004
U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified vi... 38 0.004
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 37 0.007
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical pr... 33 0.12
AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical ... 32 0.21
AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical ... 31 0.37
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 31 0.37
U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical p... 31 0.49
U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical p... 31 0.49
AF067222-2|AAC17018.2| 458|Caenorhabditis elegans Hypothetical ... 31 0.49
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 30 1.1
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 30 1.1
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 29 1.5
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm... 29 1.5
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm... 29 1.5
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ... 29 1.5
Z92781-1|CAB07180.2| 250|Caenorhabditis elegans Hypothetical pr... 29 2.0
U64844-12|AAB18312.4| 417|Caenorhabditis elegans Hypothetical p... 29 2.0
U53332-4|ABS83852.1| 215|Caenorhabditis elegans Hypothetical pr... 29 2.0
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 28 3.4
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 28 3.4
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 28 3.4
Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z36752-5|CAA85328.2| 533|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF099000-1|AAK71876.1| 334|Caenorhabditis elegans Serpentine re... 27 6.0
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 27 8.0
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 269 FALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMS 448
F +L G+ I +GRK+ + ++ L +++GWL++ + N +R + G G S
Sbjct: 137 FGVLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLIVVQSRNLLHFTISRTIVGFFTGGS 196
Query: 449 TSLGPILIGEYTSPKYR 499
S+ + I E K+R
Sbjct: 197 ISIINVFIMENIPKKHR 213
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 251 IAAIPGFALLFGNFTIPTIMG-KYGRKVANIIS-VLPVIVGW--LLITSASNTYFILAAR 418
+++I A+L +FT I+G KYGR+ + +L V L+ S+ ++ R
Sbjct: 63 VSSIAIGAILGASFT--RIIGEKYGRRNGMFFNGILNVFAALFELVAKRFSSPELLIFGR 120
Query: 419 FLQGISMGMSTSLGPILIGEYTSPKYRG 502
F+ GI+MG+S+ L P+ + E T KYRG
Sbjct: 121 FVYGINMGLSSGLVPMYLMEITPYKYRG 148
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 245 SWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISV-LPVIVGWLLITSASNTYF--ILAA 415
S++ A+ L G+F+IP I GRK IS+ + V+ G + I S F + +
Sbjct: 64 SFVVAVLFLGALAGSFSIPFIAEGVGRKNGLYISISVGVLAGGMSIASKFIPLFELYIIS 123
Query: 416 RFLQGISMGMSTSLGPILIGEYTSPKYRGA 505
R + G S+ +S L I + E + + RGA
Sbjct: 124 RVVMGWSVSVSLGLSGIFLSEASPKQNRGA 153
>U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 7 protein.
Length = 357
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +2
Query: 269 FALLFGNFTIPTIMGKYGRKVANIISVLPVIVG---WLLITSASNTYFI-LAARFLQGIS 436
+ L G F + ++GRK+ ++ + ++G LLITS + + R + GI
Sbjct: 111 YGLAIGCFVAVLMSHRHGRKLPVVVGTILDVIGVVLTLLITSVPHGVTVATVGRLINGIG 170
Query: 437 MGMSTSLGPILIGEYTSPKYRGAFLS 514
GM + G +++ E K RG L+
Sbjct: 171 QGMVQTAGSVMLSELPPLKTRGTVLA 196
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 37.1 bits (82), Expect = 0.007
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 245 SWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISV-LPVIVGWLLITSASNTYF--ILAA 415
S++ AI L G+F+I I GRK IS+ + V+ G + I S F +A+
Sbjct: 64 SFVVAILFLGALAGSFSIRLIADWIGRKNGLYISIAVGVLAGGMSIASKFIPLFELYIAS 123
Query: 416 RFLQGISMGMSTSLGPILIGEYTSPKYRGA 505
R + G S+ +S L + + E + + RGA
Sbjct: 124 RIVMGWSVSVSLGLSALFLSEASPKQNRGA 153
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.017
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 242 ESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARF 421
+S+ + + +L G T+ KYGRK I+ ++ I+ L + N + ARF
Sbjct: 85 QSFFSLVQYLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLSPNRQLLFIARF 144
Query: 422 LQGISM 439
G+S+
Sbjct: 145 CSGLSI 150
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 35.5 bits (78), Expect = 0.023
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 257 AIPGFALLFGNFTIPTIMGKYG-RKVANIISVLPVIVGWLLITSASNTY-FILAARFLQG 430
A G ++FG+F ++ K+G RKV +I V I+ L + +Y F+L RFL G
Sbjct: 204 AASGLGVIFGSFVTINLIKKFGVRKVFSICMVQSTILILLFLYVQKRSYIFLLLTRFLLG 263
Query: 431 ISM-GMSTSLGPILI 472
S + +G +LI
Sbjct: 264 FSFSSVFPVMGNLLI 278
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 35.5 bits (78), Expect = 0.023
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +2
Query: 278 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSL 457
L GN + + KYGR+ + S+L I +L + +N Y R L GIS+ + ++
Sbjct: 127 LLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIGISVSGTLTV 186
Query: 458 GPILIGEYTSPKYR 499
G E SP R
Sbjct: 187 GWTYATEMISPNRR 200
>Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical
protein C14A6.2 protein.
Length = 422
Score = 33.1 bits (72), Expect = 0.12
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +2
Query: 194 PQLQSQKPVML-IDESTESWIAAIPGFALLFGNFTIPTIMGKYG-RKVANIISVLPVIVG 367
P+L K + ++W+ + +FG F + + YG RKV +L
Sbjct: 8 PELTGNKTQYIGYSRQEKTWLFSTVAVGAMFGLFPVIIGISTYGLRKVFFAAGMLTSFTT 67
Query: 368 WLL-ITSASNTYFILAARFLQGIS-MGMSTSLGPILIGEYTSPKYRGAFLS 514
+L+ I + N L RFLQG+S G ++G I + S +G F++
Sbjct: 68 FLIPIVATMNFNLFLLMRFLQGMSYAGCMPAVGAI-TSSWASLTQQGLFIA 117
>AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical
protein Y15E3A.4 protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 332 ANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGEYTSPKYRGAFL 511
A ++S L V + + + + F++ ARF QG+S G + +++ + S K G F+
Sbjct: 104 AGVVSTLSTAV--MPLAAEVHFNFLVVARFFQGVSFGADFAAIGLIVVNWASLKQHGLFI 161
Query: 512 S 514
S
Sbjct: 162 S 162
>AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical
protein Y51B9A.6 protein.
Length = 516
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/88 (22%), Positives = 42/88 (47%)
Frame = +2
Query: 251 IAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQG 430
IAA+ + L F + +M G ++ + P+++ W S F++ R LQG
Sbjct: 114 IAAVVPMSRLTARFGVHKVMTLSGILGTFLVVITPIVITW------SFPVFVIL-RVLQG 166
Query: 431 ISMGMSTSLGPILIGEYTSPKYRGAFLS 514
I++ + +++ E+ + +G F+S
Sbjct: 167 ITLANLFTTAGVVVNEWAAVNEKGLFIS 194
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +2
Query: 272 ALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTY----FILAARFLQGISM 439
A +FG F + ++GRK +I+ I G LL +A + + R + ++
Sbjct: 102 ATIFGQFLAGWMCSQFGRKHTALIASFLYIPGALLCAAAKWCFPAFELLFVGRIIWSLAN 161
Query: 440 GMSTSLGPILIGEYTSPKYRG 502
G++T + I E P+ RG
Sbjct: 162 GVNTVNATVWIVECAPPQIRG 182
>U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical
protein T22F3.11b protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.49
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 STESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSAS--NTYFIL 409
S + WI + G I + KYG ++ I+ L I+ LI A+ N + ++
Sbjct: 62 SEKKWILWAVALGTMLGTVPINMLYVKYGARLPFFIAGLTSIISTALIPWAAGFNYWILI 121
Query: 410 AARFLQGIS 436
RF QG++
Sbjct: 122 LLRFCQGLA 130
>U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical
protein T22F3.11a protein.
Length = 453
Score = 31.1 bits (67), Expect = 0.49
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 STESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSAS--NTYFIL 409
S + WI + G I + KYG ++ I+ L I+ LI A+ N + ++
Sbjct: 62 SEKKWILWAVALGTMLGTVPINMLYVKYGARLPFFIAGLTSIISTALIPWAAGFNYWILI 121
Query: 410 AARFLQGIS 436
RF QG++
Sbjct: 122 LLRFCQGLA 130
>AF067222-2|AAC17018.2| 458|Caenorhabditis elegans Hypothetical
protein H11E01.2 protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 401 FILAARFLQGISMGMSTSLGPILIGEYTSPKYRGAFLS 514
F++ ARF QG+S G + +++ + S K G F+S
Sbjct: 114 FLVVARFFQGVSFGADFAAIGLIVVNWASLKQHGLFIS 151
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 29.9 bits (64), Expect = 1.1
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +2
Query: 101 TPFV-KQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKPVMLIDESTESWIAAIPGFAL 277
TP V K CF+ S + F + GI IL + + + T WI+ I
Sbjct: 274 TPHVLKACFIGS----MLQAFQQLAGINTILYYTADIIRSAGIENYHTIIWISVILSICN 329
Query: 278 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLI 379
L G F + K GR+ + S V+V +LI
Sbjct: 330 LIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVLI 363
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +2
Query: 269 FALLFGNFTIPTIMGKYGRKV----ANIISVLPVIVGWLLITSASNTYFILAARFLQGIS 436
F + G F I + KYG ++ A ++S V G +A + + +A RFLQG++
Sbjct: 72 FGTMVGTFPINILYVKYGARIPFFSAGVLSA--VTTGLTPWAAAQSMWIFVALRFLQGVA 129
Query: 437 MGMSTSLGPILIGEY 481
+ I+I ++
Sbjct: 130 YSADFAAIGIVISKW 144
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 451 CAHSHRDPLKKSCSQDEVCVGGACD 377
C H +PL K+CS + +GGACD
Sbjct: 932 CNHGICEPLTKTCSCAKGWMGGACD 956
>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform a protein.
Length = 1117
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 417 LAAKMKYVLEALVINSQPTITGRTLMMLATFRPYLPMMVGIVKLPNNSAKP 265
LA KY+L+ +I P R + + Y + VG+V P +SA P
Sbjct: 976 LATFHKYILQPTLIEHDPGELPRRVQSQSALNTYGSVNVGVVPTPPSSAAP 1026
>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform b protein.
Length = 1122
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 417 LAAKMKYVLEALVINSQPTITGRTLMMLATFRPYLPMMVGIVKLPNNSAKP 265
LA KY+L+ +I P R + + Y + VG+V P +SA P
Sbjct: 981 LATFHKYILQPTLIEHDPGELPRRVQSQSALNTYGSVNVGVVPTPPSSAAP 1031
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 275 LLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTS 454
LL G + ++GR+ II +L + L + A N +L ARF+QG T+
Sbjct: 141 LLIGQL-FAVVADRFGRRPIIIICLLLTGIVGSLGSLAPNFPLLLVARFIQGSCYTPLTT 199
Query: 455 LGPILIGE 478
+ +L GE
Sbjct: 200 VNYVLSGE 207
>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
tyrosine kinase protein.
Length = 1122
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 417 LAAKMKYVLEALVINSQPTITGRTLMMLATFRPYLPMMVGIVKLPNNSAKP 265
LA KY+L+ +I P R + + Y + VG+V P +SA P
Sbjct: 981 LATFHKYILQPTLIEHDPGELPRRVQSQSALNTYGSVNVGVVPTPPSSAAP 1031
>Z92781-1|CAB07180.2| 250|Caenorhabditis elegans Hypothetical
protein F09C3.2 protein.
Length = 250
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 258 AAIQDSVDSSISITGFCDCSCGIRIAVIPKTRPNCAMLI 142
AA D ++ I D CG + ++PK P+CA+ I
Sbjct: 138 AATMDQMNKMNVIPFLDDIICGNDVGIVPKPSPHCAIQI 176
>U64844-12|AAB18312.4| 417|Caenorhabditis elegans Hypothetical
protein T22F3.10 protein.
Length = 417
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 STESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNT--YFIL 409
S + WI + G I + KYG + +I+ + + L+ A+ +F++
Sbjct: 25 SGKKWIMWAVAAGTIIGTIPINLLYVKYGARYPFLIAGVVSCLATALVPLAAKISFFFLI 84
Query: 410 AARFLQGIS 436
RFLQG++
Sbjct: 85 VLRFLQGLA 93
>U53332-4|ABS83852.1| 215|Caenorhabditis elegans Hypothetical
protein F59G1.8a protein.
Length = 215
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 121 LRNIRCGYQHGAVRSRLWYHRDPDTAAAVTKTCN 222
L+N+RC YQ + +L+ + PD + K C+
Sbjct: 90 LKNLRCYYQSAGIPLQLYVNCSPDRFQTLNKYCD 123
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = +2
Query: 245 SWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFL 424
+W+A I +L G T + +GRK + + I+ + A + A RF+
Sbjct: 97 AWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVASGFAPSWEVFAAFRFI 156
Query: 425 QGISMGMSTSLGPILIGEYTSPKYR 499
G S+ + I E+ P+ R
Sbjct: 157 VGTSIASILIVFYAYILEFIEPEQR 181
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 265 WFRAVIW*LHYTYHHGQIWTKSRQHH 342
+ RA+ W LHY YH W+ HH
Sbjct: 521 YVRAIQWNLHYYYHGCVSWSWFYPHH 546
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 28.3 bits (60), Expect = 3.4
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +2
Query: 101 TPFV-KQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKPVMLIDESTESWIAAIPGFAL 277
TP V K CF+ S + F + GI IL + + + T WI+ +
Sbjct: 273 TPHVLKACFIGS----MLQAFQQLAGINTILYYTADIIRSSGISNNHTTIWISVLLSLCN 328
Query: 278 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLI 379
G F +++ K GR++ + S V++ + I
Sbjct: 329 FIGPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFI 362
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +2
Query: 242 ESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARF 421
+S+ + + +L G ++ ++GR+ I+ + I A + + RF
Sbjct: 85 QSFFSQVQYVGVLIGTLLFGSLSDRFGRRPIGILVISNAICSTFASGLAPSVKILFPLRF 144
Query: 422 LQGISMG 442
L G+S+G
Sbjct: 145 LVGLSIG 151
>Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical
protein T11F9.4 protein.
Length = 523
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 347 VLPVIVGWLLITSASNTYFILAARFLQGIS 436
V+PV+V LLI S ++T F A+R+LQ +S
Sbjct: 298 VVPVMVAILLIGSLNSTMF-SASRYLQAVS 326
>Z36752-5|CAA85328.2| 533|Caenorhabditis elegans Hypothetical
protein F35H8.6 protein.
Length = 533
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 191 IPQLQSQKPVMLIDESTESWIAAIP-GFALLFGNFTI 298
I +Q +KP L E T SWI+A P GF +L FT+
Sbjct: 268 IGAIQCRKPKELPKEFT-SWISAYPDGFVVLSTGFTV 303
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +2
Query: 275 LLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTS 454
+L GN + + + GRK I+S+L I L + ++ R L GI + +
Sbjct: 119 VLIGNIILGYVADQIGRKKTFILSMLIGIPSLSLSATFNSIAAFYIFRALTGIGIAGTMI 178
Query: 455 LGPILIGEYTSPKYR 499
+G E SP R
Sbjct: 179 VGWAYFSELVSPHQR 193
>AF099000-1|AAK71876.1| 334|Caenorhabditis elegans Serpentine
receptor, class i protein60 protein.
Length = 334
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = -1
Query: 396 VLEALVINSQPTITGRTLMMLATFRPYLPMMVGIVKLPNNSAKPGIAAI 250
++E L++ + + L+++ATF PY ++ +VK A+ G++ +
Sbjct: 278 IVEYLLVIACSHSSLNVLVLIATFPPYRKYVLSLVKRKKKIARTGLSVL 326
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +2
Query: 242 ESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARF 421
+S + I +L G F+ + GRK + ++ I+ + A N +L RF
Sbjct: 84 KSLFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRF 143
Query: 422 LQGISMGMSTSLGPILIGEYTSPKYRGA 505
G+S+G + + + E P+ R A
Sbjct: 144 FLGLSVGGTLVVVCTFVMEMLLPQQRMA 171
>Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical
protein T07C12.6 protein.
Length = 360
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 44 YYFLLFFVFSFHNKMVRWITPFVKQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKPVM 223
Y+F L+ + +V+ I + + SG F ++FGI AI I ++ + +
Sbjct: 101 YFFALYTADTEKMLVVKSINGL--EMLILSGFIQWHYIFSMLFGILAICIERIFASMLID 158
Query: 224 LIDESTESWIAAI 262
++ST+ WI +
Sbjct: 159 NYEKSTQIWIPVV 171
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +2
Query: 242 ESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARF 421
+S + I +L G F+ + GRK + ++ I+ + A N +L RF
Sbjct: 84 KSLFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRF 143
Query: 422 LQGISMGMSTSLGPILIGEYTSPKYRGA 505
G+S+G + + + E P+ R A
Sbjct: 144 FLGLSVGGTLVVVCTFVMEMLLPQQRMA 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,542,653
Number of Sequences: 27780
Number of extensions: 271706
Number of successful extensions: 937
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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