Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31985
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.74
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 29 2.3
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 2.3
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 4.0
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 28 4.0
SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_6360| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0092) 27 6.9
SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44) 27 6.9
SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 27 9.2
SB_35052| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 27 9.2
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 34.7 bits (76), Expect = 0.046
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 305 DTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGK 448
D +++ K + +LE + DL+ +KRKD+ I+DLN V D + K
Sbjct: 400 DELRKTKKKMQVQYEKLEHQLDDLKVQLKRKDVVIADLNKVVEDYKRK 447
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 302 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 430
ED + R + +RI RLE DL+ + +R SD+N++V
Sbjct: 22 EDLMTRRFRGLEDRIGRLESTVSDLQLLQRRNGRFFSDINTRV 64
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +2
Query: 356 EDEKFD--LEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK--YENKFAKLQKK 514
++EKF L ++ RKD I +LN+++ L+G + K T ++++K EN+ K K+
Sbjct: 997 QNEKFSETLNSVISRKDKAIDELNAKIRHLQGDYDK-TRRQLNKILVENENLKGSKE 1052
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 299 NEDTIKRV-CKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKV 475
NE I R CKD I+R LE ++ I L + +N+L K+
Sbjct: 366 NELVISRKKCKDQGAEISRQSSHIGKLEATKLSQETNIRSLKANINELN--------SKL 417
Query: 476 SKYENKFAKLQKK 514
SKYE + +L+K+
Sbjct: 418 SKYEGDYEELEKQ 430
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 293 DANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKK 472
D E TIK + ++ + R +DE DL V +K+ E L++Q++DLR K +
Sbjct: 3021 DIAESTIKNIKQEKN----RFQDEVNDLHGKVSQKNSENELLHAQLDDLR-KQITGYQGN 3075
Query: 473 VSKYENKFAKLQKK 514
+ E +LQ++
Sbjct: 3076 IKSLEENSNRLQER 3089
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +2
Query: 302 EDTIKRVCKDYHERIARLE---DEKFDLEYIVKRKDMEISDLNSQVNDL 439
ED +++V K +A L+ +EK D E +++ + +++LN+Q+ DL
Sbjct: 1901 EDELEKVRKKEVSLLATLDTLREEKKDQEQMLQDNGIRLAELNTQIQDL 1949
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/24 (41%), Positives = 20/24 (83%)
Frame = +2
Query: 293 DANEDTIKRVCKDYHERIARLEDE 364
+ +E+ +++V +DY E+IARL++E
Sbjct: 144 EPDEEQLEQVRRDYEEQIARLQEE 167
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = +2
Query: 296 ANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 457
A+++ I+ + ++++++DE +L+ R+ EI DL +++N+L +
Sbjct: 1352 ASKEYIEGQLESLKAQMSKIKDENENLKESDARRQQEILDLENRINELENMLAR 1405
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 281 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 418
+ + +NE + RV D E + L+ +K DLE I ++ + +L
Sbjct: 51 EELQTSNESELMRVRSDLEEMTSLLQSKKVDLEKIKEQNEKAAKEL 96
>SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 404 EISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKK 514
EI +V++L+G+F K + + + + F KLQ K
Sbjct: 112 EIEGFFDEVHELKGQFNKYKMNTIPRLQEVFKKLQSK 148
>SB_6360| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0092)
Length = 107
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 329 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 508
D + ++ L + DL+ V D ++ DLN++V+DL K V KV K L
Sbjct: 26 DLNAKVHDLNTKVHDLDTKVHDLDTKVHDLNTKVHDLNTK-VHDLNTKVHDLNTKVHDLN 84
Query: 509 KK 514
K
Sbjct: 85 TK 86
>SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44)
Length = 788
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 302 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 481
++T+ RV D R L++E+ + + D E+SD+ SQ+ + K V K
Sbjct: 374 QETLTRV--DLENRCQSLQEEQ---NFKKQMYDKELSDIRSQLKTVETKRVVVETDYKDK 428
Query: 482 YENKFA-KLQK 511
YE A KLQ+
Sbjct: 429 YEGLMAEKLQE 439
>SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)
Length = 458
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +2
Query: 293 DANEDTIKRVCKDYHERIARLEDEKFDLE---YIVKRK----DMEISDLNSQVNDLRGKF 451
+ D+ +R D H +I ED K L VKR+ +ME L V+DLR K
Sbjct: 147 EETRDSSRRDLIDAHRKIRDAEDSKETLRKENLHVKRQVKDLEMEKQSLEKSVSDLREK- 205
Query: 452 VKPTLKKVSKYENKFAKLQKK 514
VK + S+ + F +L K
Sbjct: 206 VKLVENEKSELKFAFDELDSK 226
>SB_35052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +2
Query: 305 DTIKRVCKDYHERIAR-LEDEKF---DLEYIVKRKDMEISDLNS 424
D I+R + ++R LE+ K +LE V +KDME++DLN+
Sbjct: 6 DKIRRKLESELAEVSRQLEEAKQQIQELEAAVHKKDMELNDLNA 49
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 329 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 457
D + ++ L + DL V + ++ DLN++VNDL K K
Sbjct: 348 DLNTKVHDLNTKLHDLNTKVHDLNAKVHDLNTKVNDLNTKNTK 390
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,876,255
Number of Sequences: 59808
Number of extensions: 165875
Number of successful extensions: 536
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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