Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31983
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O97299 Cluster: Putative uncharacterized protein MAL3P7...    33   2.9  
UniRef50_Q8E2E2 Cluster: Membrane protein, putative; n=5; Strept...    33   5.1  
UniRef50_Q5UF72 Cluster: Putative lipid A biosynthesis lauroylac...    32   8.9  
UniRef50_Q23C36 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_O97299 Cluster: Putative uncharacterized protein MAL3P7.37;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL3P7.37 - Plasmodium falciparum
            (isolate 3D7)
          Length = 1542

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -2

Query: 257  FNKNILKNIMILLFISFEILINNFRGLLSIYKTPLFLSVFFSHVNYHFV 111
            FN N  K+  I L+  + IL NN     +I K  L +  FF +V Y F+
Sbjct: 1286 FNNNCCKDNNIYLYYPYSILCNNLDLNNNILKKHLLVEHFFKYVLYDFI 1334


>UniRef50_Q8E2E2 Cluster: Membrane protein, putative; n=5;
           Streptococcus agalactiae|Rep: Membrane protein, putative
           - Streptococcus agalactiae serotype V
          Length = 463

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 245 ILKNIMILLFISFEILINNFRGLLSIYKTP-LFLSVFFS 132
           +LK ++I        LI N +  LSI +TP LF+S+FF+
Sbjct: 249 LLKKLVIYFIFFIATLIGNLKNELSILETPLLFISIFFT 287


>UniRef50_Q5UF72 Cluster: Putative lipid A biosynthesis
           lauroylacyltransferase; n=1; uncultured proteobacterium
           RedeBAC7D11|Rep: Putative lipid A biosynthesis
           lauroylacyltransferase - uncultured proteobacterium
           RedeBAC7D11
          Length = 307

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -2

Query: 254 NKNILKNIMILLFISFEILINNFRGLLSI--YKTPLFLSVFFSHVNYHFVN 108
           NK I+K+I   +F+  EIL+  F  LLS+  +K  +FL      + Y F++
Sbjct: 2   NKQIVKSI---IFLKMEILLKTFLWLLSLIPFKVQMFLGKILGKILYKFLS 49


>UniRef50_Q23C36 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1524

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 515 NFENCSKCSRNCSFCS 468
           N++ C KCS NC FC+
Sbjct: 815 NYQTCEKCSENCKFCT 830


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,137,153
Number of Sequences: 1657284
Number of extensions: 6678439
Number of successful extensions: 20653
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20647
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)