Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31972
(516 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.5
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 5.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 5.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.7
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 7.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 7.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 7.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 7.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 7.5
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 7.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 7.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 7.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 7.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 7.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 7.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 7.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.5
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 10.0
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 192 QALSTLHRD*PPREALHILHLKSCDSSQG 106
+A++ +H+D P + LKSC + G
Sbjct: 124 EAVAVIHKDLPINNVQGLRGLKSCHTGVG 152
Score = 20.6 bits (41), Expect = 10.0
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +3
Query: 438 YSDLYSGFSTVFNC 479
Y D+YSG+ C
Sbjct: 230 YPDIYSGYEGALRC 243
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 192 QALSTLHRD*PPREALHILHLKSCDSSQG 106
+A++ +H+D P + LKSC + G
Sbjct: 124 EAVAVIHKDLPINNVQGLRGLKSCHTGVG 152
Score = 20.6 bits (41), Expect = 10.0
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +3
Query: 438 YSDLYSGFSTVFNC 479
Y D+YSG+ C
Sbjct: 230 YPDIYSGYEGALRC 243
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 192 QALSTLHRD*PPREALHILHLKSCDSSQG 106
+A++ +H+D P + LKSC + G
Sbjct: 124 EAVAVIHKDLPINNVQGLRGLKSCHTGVG 152
Score = 20.6 bits (41), Expect = 10.0
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +3
Query: 438 YSDLYSGFSTVFNC 479
Y D+YSG+ C
Sbjct: 230 YPDIYSGYEGALRC 243
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/49 (22%), Positives = 21/49 (42%)
Frame = +3
Query: 309 LSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVIVEWMYSDLYS 455
LSDT ++ ++ N ++++LD + W + DL S
Sbjct: 127 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLIS 175
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/49 (22%), Positives = 21/49 (42%)
Frame = +3
Query: 309 LSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVIVEWMYSDLYS 455
LSDT ++ ++ N ++++LD + W + DL S
Sbjct: 127 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLIS 175
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 8 NSNNY*INNVKGNY 49
N+NNY NN NY
Sbjct: 325 NNNNYNNNNYNNNY 338
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 8 NSNNY*INNVKGNY 49
N+NNY NN NY
Sbjct: 334 NNNNYNNNNYNNNY 347
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/49 (22%), Positives = 21/49 (42%)
Frame = +3
Query: 309 LSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVIVEWMYSDLYS 455
LSDT ++ ++ N ++++LD + W + DL S
Sbjct: 127 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLIS 175
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 7.5
Identities = 5/23 (21%), Positives = 14/23 (60%)
Frame = +3
Query: 435 MYSDLYSGFSTVFNCPFIWSSSL 503
++ +Y+ ++F C IW+ ++
Sbjct: 123 LFCQIYAMLGSLFGCGSIWTMTM 145
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 86 SNNYNYNNYNNNY 98
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 86 SNNYNYNNYNNNY 98
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 86 SNNYNYNNYNNNY 98
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 86 SNNYNYNNYNNNY 98
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.0 bits (42), Expect = 7.5
Identities = 5/23 (21%), Positives = 14/23 (60%)
Frame = +3
Query: 435 MYSDLYSGFSTVFNCPFIWSSSL 503
++ +Y+ ++F C IW+ ++
Sbjct: 89 LFCQIYAMLGSLFGCGSIWTMTM 111
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 319 SNNYNYNNYNNNY 331
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 319 SNNYNYNNYNNNY 331
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 319 SNNYNYNNYNNNY 331
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 319 SNNYNYNNYNNNY 331
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 319 SNNYNYNNYNNNY 331
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 SNNY*INNVKGNY 49
SNNY NN NY
Sbjct: 308 SNNYNYNNYNNNY 320
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 7.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 261 FDGLFNFKKLINKEVDLSDT 320
+D + N KLI K VD +DT
Sbjct: 450 YDLIGNGTKLIIKNVDYADT 469
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 105 FPGKSHMILGEGYVRL 152
FPG M++G G R+
Sbjct: 375 FPGXYTMVIGSGVYRI 390
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,632
Number of Sequences: 438
Number of extensions: 3010
Number of successful extensions: 25
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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