Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31971
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 157 5e-39
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 157 5e-39
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 157 5e-39
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 157 5e-39
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 157 5e-39
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 157 5e-39
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 157 5e-39
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 157 5e-39
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 157 5e-39
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 153 9e-38
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 151 4e-37
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 91 3e-19
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 85 4e-17
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 67 6e-12
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 53 1e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.049
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.049
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 2.4
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 7.5
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 7.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 157 bits (380), Expect = 5e-39
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 157 bits (380), Expect = 5e-39
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 157 bits (380), Expect = 5e-39
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 157 bits (380), Expect = 5e-39
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 157 bits (380), Expect = 5e-39
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 157 bits (380), Expect = 5e-39
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 157 bits (380), Expect = 5e-39
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 255 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 314
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 315 SKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 157 bits (380), Expect = 5e-39
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 285 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 344
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 345 SKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 157 bits (380), Expect = 5e-39
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 153 bits (370), Expect = 9e-38
Identities = 70/78 (89%), Positives = 74/78 (94%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 298 VLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 358 SKQEYDESGPSIVHRKCF 375
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 151 bits (365), Expect = 4e-37
Identities = 71/78 (91%), Positives = 74/78 (94%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT MYPGIADRMQKEI ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 314 SKEEYDESGPGIVHRKCF 261
SK+EYDESGP IVHRKCF
Sbjct: 358 SKQEYDESGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 91.5 bits (217), Expect = 3e-19
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = -3
Query: 491 MSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPP---ERKYSVWIGGSILASLSTFQQM 321
++GG + G +R+ + P TIK+++ A P ERKY WIGGSIL SL TFQQM
Sbjct: 357 VTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQM 416
Query: 320 WISKEEYDESGPGIVHRKC 264
W+SK EYDESG IV +KC
Sbjct: 417 WVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 84.6 bits (200), Expect = 4e-17
Identities = 36/78 (46%), Positives = 54/78 (69%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 315
V+SGGT ++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+
Sbjct: 297 VLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWL 356
Query: 314 SKEEYDESGPGIVHRKCF 261
K+EY++ G +H++ F
Sbjct: 357 GKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 67.3 bits (157), Expect = 6e-12
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 13/82 (15%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXAL-----------APSTIKIKIIAPPERKYSVWIGGSIL 348
V+SGGT MYPG+ R++KE+ L A KI+I APP RK+ V++GG++L
Sbjct: 302 VLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVL 361
Query: 347 ASL--STFQQMWISKEEYDESG 288
A+L Q W+SK+EY+E G
Sbjct: 362 ANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 16/88 (18%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALA----------------PSTIKIKIIAPPERKYSVWI 363
V+SGG+ M+ A ++Q+++ L+ P I +++I+ ++Y+VW
Sbjct: 327 VLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWF 386
Query: 362 GGSILASLSTFQQMWISKEEYDESGPGI 279
GGS+LAS S F Q+ +K EY E GP I
Sbjct: 387 GGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 51.6 bits (118), Expect = 3e-07
Identities = 21/63 (33%), Positives = 41/63 (65%)
Frame = -3
Query: 491 MSGGTXMYPGIADRMQKEIXALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 312
++GG + PGIA+++++E+ + P+TI ++ P R + ++G I+AS STF+ IS
Sbjct: 477 LAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCIS 536
Query: 311 KEE 303
++
Sbjct: 537 LQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.049
Identities = 17/75 (22%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQ 324
++ GG+ +PG +R+++E+ ++ P+ + + + P+ W G L L+ +
Sbjct: 313 IVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKV 368
Query: 323 MWISKEEYDESGPGI 279
WI+++++DE G +
Sbjct: 369 PWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.049
Identities = 17/75 (22%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQ 324
++ GG+ +PG +R+++E+ ++ P+ + + + P+ W G L L+ +
Sbjct: 313 IVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKV 368
Query: 323 MWISKEEYDESGPGI 279
WI+++++DE G +
Sbjct: 369 PWINRKDWDERGDSL 383
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 468 PRYRRQDAEGDXRPRALDHQDQDHRSPREEVLR 370
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 28.3 bits (60), Expect = 3.2
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Frame = -3
Query: 494 VMSGGTXMYPGIADRMQKEIXAL-APSTIKIKIIAP----PERK----YSVWIGGSILAS 342
+++GG PG+ R+++EI + + KI +I E K + W+G S+L S
Sbjct: 214 LLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASLLGS 273
Query: 341 L-STFQQMWISKEEY 300
L T ++ ++ EE+
Sbjct: 274 LRETIERKSLTLEEW 288
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 426 RALDHQDQDHRSPREEVLRMDRW 358
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 426 RALDHQDQDHRSPREEVLRMDRW 358
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,429,302
Number of Sequences: 27780
Number of extensions: 174964
Number of successful extensions: 456
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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