Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31966
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33375| Best HMM Match : ADK (HMM E-Value=1.6e-30) 120 5e-28
SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 4e-16
SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_19245| Best HMM Match : ADK (HMM E-Value=0) 79 2e-15
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 45 3e-05
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 2e-04
SB_31065| Best HMM Match : ADK (HMM E-Value=1.5e-31) 40 0.002
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 35 0.035
SB_4186| Best HMM Match : ADK (HMM E-Value=0.094) 34 0.060
SB_43624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_16493| Best HMM Match : NACHT (HMM E-Value=1.1e-08) 30 0.98
SB_43601| Best HMM Match : ADK (HMM E-Value=2.3e-05) 29 1.7
SB_18188| Best HMM Match : SRP54 (HMM E-Value=0) 29 2.3
SB_36947| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_35426| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_12814| Best HMM Match : IncA (HMM E-Value=1.7) 28 5.3
SB_2656| Best HMM Match : IncA (HMM E-Value=1.7) 28 5.3
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_18559| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_29339| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_21353| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_26671| Best HMM Match : zf-TRAF (HMM E-Value=0.54) 27 9.2
>SB_33375| Best HMM Match : ADK (HMM E-Value=1.6e-30)
Length = 297
Score = 120 bits (290), Expect = 5e-28
Identities = 55/105 (52%), Positives = 76/105 (72%)
Frame = +2
Query: 83 IDTSKKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIME 262
++ S + IV++LGGPG+GKGT CD +V KY + HLS GDLLR EV G+ER + +T +M
Sbjct: 111 VEFSGQRIVYILGGPGAGKGTICDSVVKKYNYCHLSAGDLLREEVTRGNERGQMITEMMR 170
Query: 263 RGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE 397
G+LVP EI + LL++A + ++ GFLIDG+PR+ QGI FEE
Sbjct: 171 EGKLVPKEITIGLLQDA-MREHKDMPGFLIDGFPRDIDQGITFEE 214
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 107 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPN 283
+W GGP +GK T C + ++ +TH+ G L+ E + ++RAK L + G VPN
Sbjct: 239 IWSKGGPATGKKTHCKHVAERFNYTHIMPGTLVAQEAQKDTDRAKQLIQTISAGNDVPN 297
>SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 81.4 bits (192), Expect = 4e-16
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = +2
Query: 287 IVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLL 466
I+L+LL+ A++ + + GFLIDG+PRE QG+ FE+ +A +++YFE S +T+ RLL
Sbjct: 2 IILELLRLAMV-KQPNTTGFLIDGFPRELEQGLEFEKELALCELLLYFECSPDTMKARLL 60
Query: 467 GRAASSGRADDNEETI 514
R +SGR DDNEETI
Sbjct: 61 KRGETSGRVDDNEETI 76
Score = 80.2 bits (189), Expect = 9e-16
Identities = 37/116 (31%), Positives = 65/116 (56%)
Frame = +2
Query: 104 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPN 283
I++++GGPGSGK ++ G THLS G LL+ E ++R + + + G LV
Sbjct: 136 IMFIVGGPGSGKAELAKRLAESSGRTHLSMGQLLKEEATKDTDRGREVAQAIAMGTLVSP 195
Query: 284 EIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETL 451
E L++L E I++ + +G+++DG+PR Q F E ++ + ++ E S E +
Sbjct: 196 EHALNILTEKIVSDEKNLEGYVVDGFPRSHEQAKNFTEKVSDFNRVVALECSDEEM 251
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +2
Query: 104 IVWVLGGPGSGKGTQCDKIVAK-YGFTHLSTGDLLRAEVKSGSERAK 241
IV+++GGPGSGK T+ K++A+ G TH+S G LL+ E ++RA+
Sbjct: 340 IVFIVGGPGSGK-TELAKLLAESSGRTHISMGQLLKEEATKDTDRAR 385
>SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 79.8 bits (188), Expect = 1e-15
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +2
Query: 104 IVWVLGGPGSGKGTQCDKIVAK-YGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVP 280
+++V+GGPGSGK T+ K++A+ G TH+S G LL+ E ++RA+ + + G LV
Sbjct: 106 VIFVIGGPGSGK-TELAKLLAESSGRTHISMGQLLKEEATKDTDRAREVARAIGMGTLVS 164
Query: 281 NEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETL 451
E L +L E I+ + G+++DGYPR Q F E ++ + ++ E S E +
Sbjct: 165 PEHALGILSETIVRGEKNLGGYVVDGYPRSHEQAKNFTEKVSDFNRVVALECSDEEM 221
>SB_19245| Best HMM Match : ADK (HMM E-Value=0)
Length = 188
Score = 79.0 bits (186), Expect = 2e-15
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Frame = +2
Query: 113 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 292
++G PGSGKGT ++IV +G HLS+G+LLR V++ ++ + A + +GELVP+E++
Sbjct: 36 IMGPPGSGKGTVSERIVRDFGVEHLSSGELLRHHVQNHTDLGEEAQAYILKGELVPDELM 95
Query: 293 LDLLKEAILARAEESKG-FLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLLG 469
+DL IL + KG +L+DG+PR Q E + V++ + T+ R+
Sbjct: 96 VDL----ILHELDAKKGNWLLDGFPRTVGQAETLSEK-HKIDVVVNMDVPFATIVDRIKQ 150
Query: 470 R--AASSGR 490
R A SGR
Sbjct: 151 RWVHAVSGR 159
>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
Length = 1644
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +2
Query: 317 LARAEESKGFLIDGYPREKSQGIAFEENI---APVSVIIYFEASSETLTQRLLGRAASSG 487
+A+++ K FLIDG+PR + +E + V +++FE + R++ R SSG
Sbjct: 2 MAKSDVQK-FLIDGFPRNEDNLQGWESRMNDKVDVKAVLFFECPEDICIGRIMSRGQSSG 60
Query: 488 RADDNEETI 514
R DDN E++
Sbjct: 61 RPDDNIESL 69
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 36.3 bits (80), Expect(2) = 2e-04
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Frame = +2
Query: 269 ELVPNEIVLDLLKEAILARAEESKGFLIDGYPR-----EKSQGIAFEENIAPVSVIIYFE 433
+LV +++V++L+ + L + E G+L+DG+PR EK G+ E+ A + ++ F
Sbjct: 54 QLVSDDLVVELIDDN-LTKPECQNGWLLDGFPRTVAQAEKLDGL-LEKRNAQLDAVVEFN 111
Query: 434 ASSETLTQRLLG 469
+ L +R+ G
Sbjct: 112 IADSLLVKRITG 123
Score = 25.4 bits (53), Expect(2) = 2e-04
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 113 VLGGPGSGKGTQ 148
+LG PGSGKGTQ
Sbjct: 43 LLGPPGSGKGTQ 54
>SB_31065| Best HMM Match : ADK (HMM E-Value=1.5e-31)
Length = 166
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Frame = +2
Query: 272 LVPNEIVLDLLKEAILARAEESKGFLIDGYPR-----EKSQGIAFEENIAPVSVIIYFEA 436
LV +++V++L+ + L + E G+L+DG+PR EK G+ E+ A + ++ F
Sbjct: 1 LVSDDLVVELIDDN-LTKPECQNGWLLDGFPRTVAQAEKLDGL-LEKRNAQLDAVVEFNI 58
Query: 437 SSETLTQRLLGRA--ASSGRADDNE 505
+ L +R+ GR SSGR E
Sbjct: 59 ADSLLVKRITGRLLHKSSGRTYHTE 83
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 35.1 bits (77), Expect = 0.035
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 254 IMERGELVPNEIVLDLLKEAILARAEESKGFLIDGYP 364
I+ RGE +P E+V LL E + + G+++DG+P
Sbjct: 16 ILLRGEAIPEELVTKLLIEKVYSPETAHHGYILDGFP 52
>SB_4186| Best HMM Match : ADK (HMM E-Value=0.094)
Length = 1053
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 104 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKS 223
+V + GGPGS KG+ + +V +GF +S DL+ + S
Sbjct: 663 VVIMFGGPGSTKGSIINDLVKMFGFVFISAEDLILKNLPS 702
>SB_43624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 31.1 bits (67), Expect = 0.56
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 92 SKKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDL--LRAEVKSGS-ERAKCLTAIM 259
SK P V+ PGSG GT D+ V K + S+GD + A +K + + K LT+++
Sbjct: 343 SKPPPTGVMPTPGSGPGTSFDQCVFKTDLSKGSSGDTFEMSAFIKEETVQIGKALTSLV 401
>SB_16493| Best HMM Match : NACHT (HMM E-Value=1.1e-08)
Length = 833
Score = 30.3 bits (65), Expect = 0.98
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 107 VWVLGGPGSGKGTQCDKIVAKY 172
V V GGPGSGK T C ++V ++
Sbjct: 59 VLVEGGPGSGKTTMCQRLVQEW 80
>SB_43601| Best HMM Match : ADK (HMM E-Value=2.3e-05)
Length = 712
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 275 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIA 388
VP+++VL LL + + +KG+++ G+P+ + Q A
Sbjct: 325 VPDDLVLQLLHQRMSRLDAVTKGWVLHGFPKTREQAEA 362
>SB_18188| Best HMM Match : SRP54 (HMM E-Value=0)
Length = 410
Score = 29.1 bits (62), Expect = 2.3
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Frame = +2
Query: 95 KKPIVWVLGGPGSGKGTQCDKIVAKY---GF-THLSTGDLLRAEVKSGSERAKCLTAIME 262
KK ++ +G GSGK T C K+ Y G+ T L D RA ++ I
Sbjct: 15 KKNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPF 74
Query: 263 RGELVPNEIVLDLLKEAILARAEES-KGFLIDGYPREKSQGIAFEE 397
G + V+ + +E + EE+ + ++D R K + FEE
Sbjct: 75 YGSYTETDPVI-IAQEGVEKFKEENFEIIIVDTSGRHKQEESLFEE 119
>SB_36947| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 114 SWEVPDQEREHNATRSSPNTGSLTSRLETCSGLKSKAARRG 236
+WE D E +++A R++ +T ++ET LK+ RG
Sbjct: 52 AWETRDLEHDNSAERTTTHTLRTADKIETLISLKAVKHDRG 92
>SB_35426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 186 SRLETCSGLKSKAARRGRNALPLLWKEASLSLMKSSWIC*KKRSW-PVLKNPKASSS 353
++L S A GR WK SLS+ K WI R ++KNP++ S+
Sbjct: 221 AKLTASSSQSGFPASSGRLLGASAWKPVSLSIDKEPWIMTGNRDQNTIIKNPQSMSA 277
>SB_12814| Best HMM Match : IncA (HMM E-Value=1.7)
Length = 226
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 135 PDPGPPRTHTIGFFDVSMGAIVYKIKIDVVCDNLVI 28
P PP+THT S+G V ++ +CD +
Sbjct: 16 PSVCPPQTHTTPTAPASIGGDVQSFRLQKICDTQAV 51
>SB_2656| Best HMM Match : IncA (HMM E-Value=1.7)
Length = 226
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 135 PDPGPPRTHTIGFFDVSMGAIVYKIKIDVVCDNLVI 28
P PP+THT S+G V ++ +CD +
Sbjct: 16 PSVCPPQTHTTPTAPASIGGDVQSFRLQKICDTQAV 51
>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 223 RLGEGEMPYRYYGKRRACP**NRPGSAKRSDPGPC*RI--QRLPHRRLPSREVTGYR 387
RL G +P R RR P P S P R+ +RLP RRLPSR + R
Sbjct: 32 RLPSGRLPSRRLPSRRL-PSGRLPSRRLPSGRLPSGRLPSRRLPSRRLPSRRLPSRR 87
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +1
Query: 184 PLDWRPAQG*SQKRLGEGEMPYRYYGKRRACP**NRPGS--AKRSDPGPC*RIQRLPHRR 357
P W P++ +RL G +P R R P P R P C +RLP R
Sbjct: 206 PSGWLPSRRLPSRRLPSGRLPSRRLPSGRL-PSGRLPSRWLPSRRLPSGCLPSRRLPSGR 264
Query: 358 LPSREVTGYR 387
LPS + R
Sbjct: 265 LPSGRLPSRR 274
>SB_18559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 165 ATILSHCVPFPDPGPPRTHTI 103
A I S VP+ D GPPR TI
Sbjct: 6 ALIQSDVVPYEDKGPPRPETI 26
>SB_29339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 132 DPGPPRTHTIGFFDVSMGAIVYKIKIDVVCDNLVI 28
D PP+THT S+G V ++ +CD +
Sbjct: 185 DVCPPQTHTTPTAPASIGGDVQSFRLQKICDTQAV 219
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 278 PNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENI 403
P VLD+ +E + A E + D PR++ +G FE++I
Sbjct: 1361 PRRRVLDIEEEPLRIAANEPQP-AADPLPRDRPRGFVFEDDI 1401
>SB_21353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -1
Query: 123 PPRTHTIGFFDVSMGAIVYKIKIDVVCDNLVI 28
PP+THT S+G V ++ +CD +
Sbjct: 518 PPQTHTTPTAPASIGGDVQSFRLQKICDTQAV 549
>SB_26671| Best HMM Match : zf-TRAF (HMM E-Value=0.54)
Length = 901
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -1
Query: 501 LSSARPELAARPSRRCVSVS---EEASKYIITETGAMFSSKAIP 379
LSS +P+ + P + CV S ++ + +T+ GA F K P
Sbjct: 423 LSSTKPDSSGIPPKNCVDESGSDDDLMRPALTQAGAKFMVKTEP 466
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,320,601
Number of Sequences: 59808
Number of extensions: 334600
Number of successful extensions: 1001
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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