Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31965
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113559-1|AAM29564.1|  163|Drosophila melanogaster RH08259p pro...    41   9e-04
AE013599-671|AAF59072.1|  214|Drosophila melanogaster CG8736-PA ...    41   9e-04
BT025057-1|ABE73228.1|  481|Drosophila melanogaster IP15830p pro...    29   3.7  
BT004882-1|AAO45238.1|  481|Drosophila melanogaster GH13361p pro...    29   3.7  
AE014298-2818|AAF48935.1|  481|Drosophila melanogaster CG7874-PA...    29   3.7  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    28   8.6  

>AY113559-1|AAM29564.1|  163|Drosophila melanogaster RH08259p
           protein.
          Length = 163

 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +3

Query: 33  AAVALAREYPAGLHPAICPNYPFCDADA 116
           AA     +YPAG++P  CPNYP+CD +A
Sbjct: 100 AAAPGGDKYPAGVNPQTCPNYPYCDVNA 127



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
 Frame = +3

Query: 12  LFAILTLAAVAL-----AREYPAGLHPAICPNYPFCDADALAKYTPQGNA 146
           LFA     AVA      A +YPAG++P  CPN+P CD   L    PQ  A
Sbjct: 6   LFATFVALAVAKPQHQPAAQYPAGVNPQDCPNFPICDNARLHNPQPQWGA 55



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = +1

Query: 121 PSTPHRXMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPYC 264
           P       P P+W   P+    A AA+    KYPA      CPNYPYC
Sbjct: 77  PQPQWNPQPQPQWQAQPS-WNAAPAAAPGGDKYPAGVNPQTCPNYPYC 123



 Score = 33.5 bits (73), Expect = 0.17
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 51  REYPAGLHPAICPNYPFCD 107
           R YPAG+ P  CPN+P+C+
Sbjct: 145 RLYPAGVSPHQCPNFPYCN 163


>AE013599-671|AAF59072.1|  214|Drosophila melanogaster CG8736-PA
           protein.
          Length = 214

 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +3

Query: 33  AAVALAREYPAGLHPAICPNYPFCDADA 116
           AA     +YPAG++P  CPNYP+CD +A
Sbjct: 151 AAAPGGDKYPAGVNPQTCPNYPYCDVNA 178



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
 Frame = +3

Query: 12  LFAILTLAAVAL-----AREYPAGLHPAICPNYPFCDADALAKYTPQGNA 146
           LFA     AVA      A +YPAG++P  CPN+P CD   L    PQ  A
Sbjct: 57  LFATFVALAVAKPQHQPAAQYPAGVNPQDCPNFPICDNARLHNPQPQWGA 106



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = +1

Query: 121 PSTPHRXMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPYC 264
           P       P P+W   P+    A AA+    KYPA      CPNYPYC
Sbjct: 128 PQPQWNPQPQPQWQAQPS-WNAAPAAAPGGDKYPAGVNPQTCPNYPYC 174



 Score = 33.5 bits (73), Expect = 0.17
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 51  REYPAGLHPAICPNYPFCD 107
           R YPAG+ P  CPN+P+C+
Sbjct: 196 RLYPAGVSPHQCPNFPYCN 214


>BT025057-1|ABE73228.1|  481|Drosophila melanogaster IP15830p
           protein.
          Length = 481

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +2

Query: 86  PKLPVLRC*RPGQV-HPTGXCRYQNGCATQPSCRSLELRRILCPNIRLIS 232
           P  P  +C   G   H +G C   + C   P  R L+   + CP + + S
Sbjct: 273 PTPPTFKCQTAGLFPHISGDCSRYHNCLLNPVLRQLQDIELTCPELTVFS 322


>BT004882-1|AAO45238.1|  481|Drosophila melanogaster GH13361p
           protein.
          Length = 481

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +2

Query: 86  PKLPVLRC*RPGQV-HPTGXCRYQNGCATQPSCRSLELRRILCPNIRLIS 232
           P  P  +C   G   H +G C   + C   P  R L+   + CP + + S
Sbjct: 273 PTPPTFKCQTAGLFPHISGDCSRYHNCLLNPVLRQLQDIELTCPELTVFS 322


>AE014298-2818|AAF48935.1|  481|Drosophila melanogaster CG7874-PA
           protein.
          Length = 481

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +2

Query: 86  PKLPVLRC*RPGQV-HPTGXCRYQNGCATQPSCRSLELRRILCPNIRLIS 232
           P  P  +C   G   H +G C   + C   P  R L+   + CP + + S
Sbjct: 273 PTPPTFKCQTAGLFPHISGDCSRYHNCLLNPVLRQLQDIELTCPELTVFS 322


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 4   TESCSPSSLWPR-*LWPASTQPDSTQPFAQTTRSAMLTPWPSTP 132
           T +C+P++  PR    P++++P +T P + TT S    P  +TP
Sbjct: 358 TSTCAPTTTTPRPTTTPSTSRPTTTTPRSTTTTSTS-RPTTTTP 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,236,727
Number of Sequences: 53049
Number of extensions: 636063
Number of successful extensions: 2073
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2068
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)