Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31964
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.1  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   8.1  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = +3

Query: 219  RDTLMKQKVAESVLQRVVGEEAPKVL---HKQFNSPINLYSEQNIANSIRQQTSPLPT 383
            R T   Q+  +   + +  + AP+V    H Q N   +LYS +N +   R +  P P+
Sbjct: 1072 RITSALQQDWDETRRELAEQGAPRVADNQHNQDNDRTSLYSARNTSEEQRGRRHPTPS 1129


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 340 TLQTLSGSKLRLCQLTAITDGRTLSRGKSFTRNATMQQST 459
           T   L G + R+C+    TDG    R   F  +A   ++T
Sbjct: 293 TSTALDGQRTRVCKCMHFTDGPDCDRCLPFYNDAPWGRAT 332


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 122 PGS*GPKGAWPHRELPASSPQPSNEGT 202
           PG  G KGA   R  P S   P  +GT
Sbjct: 108 PGPMGLKGAKGVRGFPGSEGLPGEKGT 134


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 18/61 (29%), Positives = 22/61 (36%)
 Frame = +1

Query: 286 LRCCTSNSTLQSIYTRNRTLQTLSGSKLRLCQLTAITDGRTLSRGKSFTRNATMQQSTHI 465
           L  C S  TL +I      L+   G K  LC   +I    T+    S     T     HI
Sbjct: 167 LSICASVFTLMAIAIDMNPLKPRMGKKATLCVAASIWIVGTIISCPSLLFFTTYPMKDHI 226

Query: 466 L 468
           L
Sbjct: 227 L 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,600
Number of Sequences: 2352
Number of extensions: 12700
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)