Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31960
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1040 + 9054441-9056006                                           29   2.9  
08_02_1423 + 26975466-26975508,26976253-26976365,26976505-269765...    28   5.1  
07_03_0207 - 15183894-15184685,15184993-15185078,15186042-151861...    28   5.1  

>07_01_1040 + 9054441-9056006
          Length = 521

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -1

Query: 183 DKVK*HPWVVLFAIGQTFVI*DTLTRYMKTSQH*YFLLVGIIT*DCN 43
           +KV    W+ +  I QTFV  D +    +  Q    LLV ++  DCN
Sbjct: 452 NKVPGCSWIEIGGIVQTFVSNDMMLHQSREMQRMMELLVSLVEQDCN 498


>08_02_1423 +
           26975466-26975508,26976253-26976365,26976505-26976561,
           26976607-26976801,26976912-26977060,26977145-26977307,
           26977865-26977957,26978075-26978158,26978865-26979004,
           26979093-26979192
          Length = 378

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 22  SHSLGLDVAILCNNPYQKKILMLRRLHITCQSILYD 129
           S+   + + ILC       +L+ R+LH+ C  +L +
Sbjct: 273 SNDKNISLRILCKTDCMYALLVFRKLHLKCAQVLLE 308


>07_03_0207 -
           15183894-15184685,15184993-15185078,15186042-15186144,
           15186890-15186971,15187112-15187203,15187295-15187383,
           15187467-15187547,15188610-15188724,15188894-15188935
          Length = 493

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 276 CIRCRIQLELKPRGCELTQAKINCVIQ 356
           C+ C   +E K  GC + +AKIN +I+
Sbjct: 463 CMSCLKDIESKKWGCPICRAKINQIIR 489


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,928,882
Number of Sequences: 37544
Number of extensions: 202704
Number of successful extensions: 317
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)