Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31960
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005171-1|AAH05171.2|  647|Homo sapiens chaperone, ABC1 activit...    29   9.7  
AL353689-5|CAI19106.1|  492|Homo sapiens chaperone, ABC1 activit...    29   9.7  
AL353689-4|CAI19105.1|  595|Homo sapiens chaperone, ABC1 activit...    29   9.7  
AL353689-3|CAI19104.1|  572|Homo sapiens chaperone, ABC1 activit...    29   9.7  
AL353689-2|CAI19103.1|  647|Homo sapiens chaperone, ABC1 activit...    29   9.7  
AK074693-1|BAC11143.1|  647|Homo sapiens protein ( Homo sapiens ...    29   9.7  
AJ278126-1|CAC00482.1|  368|Homo sapiens hypothetical protein pr...    29   9.7  
AB073905-1|BAB91363.1|  647|Homo sapiens chaperone-ABC1-like pro...    29   9.7  

>BC005171-1|AAH05171.2|  647|Homo sapiens chaperone, ABC1 activity
           of bc1 complex homolog (S. pombe) protein.
          Length = 647

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 416 SSGLVQEFKN*MMYNVLMCSLNNAVDLGLCELTPSW 309
           + GL QE +N + YN+L+  L    +    +  P+W
Sbjct: 456 AEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNW 491


>AL353689-5|CAI19106.1|  492|Homo sapiens chaperone, ABC1 activity
           of bc1 complex homolog (S. pombe) protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 416 SSGLVQEFKN*MMYNVLMCSLNNAVDLGLCELTPSW 309
           + GL QE +N + YN+L+  L    +    +  P+W
Sbjct: 301 AEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNW 336


>AL353689-4|CAI19105.1|  595|Homo sapiens chaperone, ABC1 activity
           of bc1 complex homolog (S. pombe) protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 416 SSGLVQEFKN*MMYNVLMCSLNNAVDLGLCELTPSW 309
           + GL QE +N + YN+L+  L    +    +  P+W
Sbjct: 404 AEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNW 439


>AL353689-3|CAI19104.1|  572|Homo sapiens chaperone, ABC1 activity
           of bc1 complex homolog (S. pombe) protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 416 SSGLVQEFKN*MMYNVLMCSLNNAVDLGLCELTPSW 309
           + GL QE +N + YN+L+  L    +    +  P+W
Sbjct: 381 AEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNW 416


>AL353689-2|CAI19103.1|  647|Homo sapiens chaperone, ABC1 activity
           of bc1 complex homolog (S. pombe) protein.
          Length = 647

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 416 SSGLVQEFKN*MMYNVLMCSLNNAVDLGLCELTPSW 309
           + GL QE +N + YN+L+  L    +    +  P+W
Sbjct: 456 AEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNW 491


>AK074693-1|BAC11143.1|  647|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90212 fis, clone MAMMA1002128, weakly similar to
           ABC1 PROTEIN HOMOLOG PRECURSOR. ).
          Length = 647

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 416 SSGLVQEFKN*MMYNVLMCSLNNAVDLGLCELTPSW 309
           + GL QE +N + YN+L+  L    +    +  P+W
Sbjct: 456 AEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNW 491


>AJ278126-1|CAC00482.1|  368|Homo sapiens hypothetical protein
           protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 416 SSGLVQEFKN*MMYNVLMCSLNNAVDLGLCELTPSW 309
           + GL QE +N + YN+L+  L    +    +  P+W
Sbjct: 177 AEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNW 212


>AB073905-1|BAB91363.1|  647|Homo sapiens chaperone-ABC1-like
           protein.
          Length = 647

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 416 SSGLVQEFKN*MMYNVLMCSLNNAVDLGLCELTPSW 309
           + GL QE +N + YN+L+  L    +    +  P+W
Sbjct: 456 AEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNW 491


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,529,367
Number of Sequences: 237096
Number of extensions: 1252551
Number of successful extensions: 1455
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)