Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31956
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.5  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 162 HLKPLIEFCLALLVLNM 112
           H KP++  CLA L L +
Sbjct: 1   HFKPILVLCLATLALGL 17


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 165 KHLKPLIEFCLALLVLN 115
           KH+ P ++ C+  LV+N
Sbjct: 604 KHIVPKLQLCMQNLVIN 620


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 412 FQSIHLCSLVYRII 453
           F SIHLC + Y  I
Sbjct: 292 FDSIHLCDVCYSTI 305


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 412 FQSIHLCSLVYRII 453
           F SIHLC + Y  I
Sbjct: 310 FDSIHLCDVCYSTI 323


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 431 HKCIDWKNLKWL 396
           HKC D+  + WL
Sbjct: 92  HKCYDYDAIPWL 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,664
Number of Sequences: 336
Number of extensions: 1926
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)