Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31956
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g10110.1 68415.m01050 hypothetical protein                          27   5.7  
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot...    27   5.7  
At1g36180.1 68414.m04497 acetyl-CoA carboxylase 2 (ACC2) nearly ...    27   7.5  
At1g41830.1 68414.m04829 multi-copper oxidase type I family prot...    27   9.9  

>At2g10110.1 68415.m01050 hypothetical protein
          Length = 169

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 356 VIHSTLEALNKSLSTILDSSNQYTYAHL 439
           +IHST  +  KS STI+  S  Y+ A L
Sbjct: 66  IIHSTNHSTTKSSSTIIHHSTSYSTASL 93


>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
           similar to pollen-specific BP10 protein
           [SP|Q00624][Brassica napus]; contains Pfam profile:
           PF00394 Multicopper oxidase
          Length = 551

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 205 VTADTASADVYSIEASKTTDRVLFSASSIEY 113
           +TAD  + D Y + +S+ T ++L +A  + Y
Sbjct: 264 ITADQPAKDYYIVVSSRFTSKILITAGVLHY 294


>At1g36180.1 68414.m04497 acetyl-CoA carboxylase 2 (ACC2) nearly
           identical to acetyl-CoA carboxylase 2 (ACC2)
           [Arabidopsis thaliana] GI:11869928
          Length = 1755

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
 Frame = +3

Query: 93  VQTSGDTYSILEALNKTLSVVLDASIEYTSADAVSAVTSYV-----GTDKPRHIFNTRSA 257
           +Q SGD     E +NK   ++ +  +  T   A   V S +     G    RH F+    
Sbjct: 690 LQDSGDEDQTQERVNKLAKILKEEEVSLTLCSAGVGVISCIIQRDEGRTPMRHSFHWLME 749

Query: 258 KQNYRPF*ILLLNTHRLMLYVSCDVIRVY 344
           KQ Y    +L      L +Y+  D ++ Y
Sbjct: 750 KQYYVEEPLLRHVEPPLSVYLELDKLKGY 778


>At1g41830.1 68414.m04829 multi-copper oxidase type I family protein
           similar to pollen-specific BP10 protein
           [SP|Q00624][Brassica napus]; contains Pfam profile:
           PF00394 Multicopper oxidase
          Length = 542

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -3

Query: 205 VTADTASADVYSIEASKTTDRVLFSASSIEY 113
           +TAD +  D Y + +S+ TD+++ +   + Y
Sbjct: 264 ITADQSPRDYYVVVSSRFTDKIITTTGVLRY 294


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,006,580
Number of Sequences: 28952
Number of extensions: 154824
Number of successful extensions: 337
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)