Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31953
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   4.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.6  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 103 HGHQIL*SSCQYFVL*CG 50
           HGH+++ S+  ++ L CG
Sbjct: 451 HGHRVIYSTVGHWYLDCG 468


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 370 VYWFSLTRHDFNWNLTLYLC*SRLTIRL 453
           +Y+F      FN +L   LC    T+ L
Sbjct: 56  IYYFYCVSITFNVHLLFLLCSGYFTVHL 83



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -3

Query: 364 WYLVYFPQFVSNATIICVYIYFKWCIYMCFPCEAFFTI 251
           ++L+    F     I  V++ F  CIY  F     FT+
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTM 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,711
Number of Sequences: 336
Number of extensions: 3161
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)