Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31953
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125224-1|AAI25225.1|  748|Homo sapiens LRCH2 protein protein.        33   0.78 
AL589786-1|CAH70721.1|  612|Homo sapiens leucine-rich repeats an...    33   0.78 
AL445164-1|CAI43033.1|  612|Homo sapiens leucine-rich repeats an...    33   0.78 
AL121878-2|CAI42077.1|  612|Homo sapiens leucine-rich repeats an...    33   0.78 

>BC125224-1|AAI25225.1|  748|Homo sapiens LRCH2 protein protein.
          Length = 748

 Score = 32.7 bits (71), Expect = 0.78
 Identities = 26/104 (25%), Positives = 54/104 (51%)
 Frame = +2

Query: 89  YLMPVWPQNISVYKCDLNKEKLTQLPNTLWKSVNKYINFILNVNNPLFTIWKVRYRKECF 268
           +++P    ++ + K D +  K+T++P   ++ ++ ++  I+  NNPL    +V   + C 
Sbjct: 238 HVLPDELGDLPLVKLDFSCNKVTEIP-VCYRKLH-HLQVIILDNNPL----QVPPAQICL 291

Query: 269 TRKTHVNTPFKIYINANYCCVRNELWEINEVPSTFTGLVSQDMT 400
             K H+   FK Y+N   CC  ++  +  ++PS    + SQ +T
Sbjct: 292 KGKVHI---FK-YLNIQACCRMDKKPDSLDLPSLSKRMPSQPLT 331


>AL589786-1|CAH70721.1|  612|Homo sapiens leucine-rich repeats and
           calponin homology (CH) domain containing 2 protein.
          Length = 612

 Score = 32.7 bits (71), Expect = 0.78
 Identities = 26/104 (25%), Positives = 54/104 (51%)
 Frame = +2

Query: 89  YLMPVWPQNISVYKCDLNKEKLTQLPNTLWKSVNKYINFILNVNNPLFTIWKVRYRKECF 268
           +++P    ++ + K D +  K+T++P   ++ ++ ++  I+  NNPL    +V   + C 
Sbjct: 81  HVLPDELGDLPLVKLDFSCNKVTEIP-VCYRKLH-HLQVIILDNNPL----QVPPAQICL 134

Query: 269 TRKTHVNTPFKIYINANYCCVRNELWEINEVPSTFTGLVSQDMT 400
             K H+   FK Y+N   CC  ++  +  ++PS    + SQ +T
Sbjct: 135 KGKVHI---FK-YLNIQACCRMDKKPDSLDLPSLSKRMPSQPLT 174


>AL445164-1|CAI43033.1|  612|Homo sapiens leucine-rich repeats and
           calponin homology (CH) domain containing 2 protein.
          Length = 612

 Score = 32.7 bits (71), Expect = 0.78
 Identities = 26/104 (25%), Positives = 54/104 (51%)
 Frame = +2

Query: 89  YLMPVWPQNISVYKCDLNKEKLTQLPNTLWKSVNKYINFILNVNNPLFTIWKVRYRKECF 268
           +++P    ++ + K D +  K+T++P   ++ ++ ++  I+  NNPL    +V   + C 
Sbjct: 81  HVLPDELGDLPLVKLDFSCNKVTEIP-VCYRKLH-HLQVIILDNNPL----QVPPAQICL 134

Query: 269 TRKTHVNTPFKIYINANYCCVRNELWEINEVPSTFTGLVSQDMT 400
             K H+   FK Y+N   CC  ++  +  ++PS    + SQ +T
Sbjct: 135 KGKVHI---FK-YLNIQACCRMDKKPDSLDLPSLSKRMPSQPLT 174


>AL121878-2|CAI42077.1|  612|Homo sapiens leucine-rich repeats and
           calponin homology (CH) domain containing 2 protein.
          Length = 612

 Score = 32.7 bits (71), Expect = 0.78
 Identities = 26/104 (25%), Positives = 54/104 (51%)
 Frame = +2

Query: 89  YLMPVWPQNISVYKCDLNKEKLTQLPNTLWKSVNKYINFILNVNNPLFTIWKVRYRKECF 268
           +++P    ++ + K D +  K+T++P   ++ ++ ++  I+  NNPL    +V   + C 
Sbjct: 81  HVLPDELGDLPLVKLDFSCNKVTEIP-VCYRKLH-HLQVIILDNNPL----QVPPAQICL 134

Query: 269 TRKTHVNTPFKIYINANYCCVRNELWEINEVPSTFTGLVSQDMT 400
             K H+   FK Y+N   CC  ++  +  ++PS    + SQ +T
Sbjct: 135 KGKVHI---FK-YLNIQACCRMDKKPDSLDLPSLSKRMPSQPLT 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,051,358
Number of Sequences: 237096
Number of extensions: 1477860
Number of successful extensions: 6020
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6020
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)