Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31953
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071067-1|AAL48689.1|  844|Drosophila melanogaster RE14386p pro...    29   2.8  
AE014297-2516|AAF55550.1|  844|Drosophila melanogaster CG7678-PA...    29   2.8  
AE014297-5|AAF52172.2|  908|Drosophila melanogaster CG12582-PA, ...    28   8.6  

>AY071067-1|AAL48689.1|  844|Drosophila melanogaster RE14386p
           protein.
          Length = 844

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = -1

Query: 222 LFTFKIKFMYLFTDFHSVFGNCVS---FSLFKSHLY 124
           L T+K+K   +F   H VFG C+S   F  FK + Y
Sbjct: 533 LNTYKMKLSIIFGVLHMVFGVCMSVENFVFFKKYAY 568


>AE014297-2516|AAF55550.1|  844|Drosophila melanogaster CG7678-PA
           protein.
          Length = 844

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = -1

Query: 222 LFTFKIKFMYLFTDFHSVFGNCVS---FSLFKSHLY 124
           L T+K+K   +F   H VFG C+S   F  FK + Y
Sbjct: 533 LNTYKMKLSIIFGVLHMVFGVCMSVENFVFFKKYAY 568


>AE014297-5|AAF52172.2|  908|Drosophila melanogaster CG12582-PA,
           isoform A protein.
          Length = 908

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 96  IKYYDR-HVNILFYDADTIGV*RVNDSLYGR 7
           + +++R H+N+ F+  DT+   R+N  L GR
Sbjct: 97  VHHFNRGHINLTFHGIDTVSEIRLNHQLLGR 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,673,331
Number of Sequences: 53049
Number of extensions: 470644
Number of successful extensions: 999
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)