SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31952
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    31   0.006
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    25   0.39 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   1.2  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   1.2  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   1.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.1  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   3.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   3.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   3.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   3.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   3.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.3  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 31.1 bits (67), Expect = 0.006
 Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
 Frame = +1

Query: 190 TTEIEHKAQTQERVVEGPVKPSKPPIFTKKMQPCRVFEHEQARFEV--EFDGEPLPLIKW 363
           T E    A     V+  PV  +K P F+  ++      H +    +     G P P  +W
Sbjct: 208 TGETRLSATKGRLVITEPVG-TKAPAFSTDIKVLGYQRHSKQNVALLCPAQGFPSPSFRW 266

Query: 364 YR--ENFPIKNSPDFQIHTFSTKSILIIRQVFVEDSAVFAAVAENRGG 501
           Y+  E    K +             LIIR+  VEDS  +  V  N  G
Sbjct: 267 YKFVEGTTRKQAVTLNDRVKQVAGTLIIREAKVEDSGKYLCVVNNSVG 314



 Score = 27.1 bits (57), Expect = 0.095
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 313 ARFEVEFDGEPLPLIKWYRENFPIKNS 393
           A F   F+G P+  I W ++  PI ++
Sbjct: 345 ATFTCNFEGNPIKTISWLKDGHPIDHN 371



 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 313 ARFEVEFDGEPLPLIKWYR 369
           A  E + DG P P++ W R
Sbjct: 716 AAVECKADGFPRPVVTWKR 734


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = -2

Query: 177 NFTGYFFIPDDLFLSLFLF---RNVHFFAVHGRFRRIRY 70
           N  GY F P D FLSLF++    N  +F    +F   RY
Sbjct: 73  NIGGYDF-PKDTFLSLFIYGMHHNEKYFPEPEKFDPNRY 110


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 379 PIKNSPDFQIHTFSTKSILIIRQVFVEDSAVFA 477
           P   SP F  H F+ +S   I+   V D ++FA
Sbjct: 31  PAGRSPAFLPHHFTKRSFFDIQCKGVYDKSIFA 63


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 379 PIKNSPDFQIHTFSTKSILIIRQVFVEDSAVFA 477
           P   SP F  H F+ +S   I+   V D ++FA
Sbjct: 31  PAGRSPAFLPHHFTKRSFFDIQCKGVYDKSIFA 63


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 379 PIKNSPDFQIHTFSTKSILIIRQVFVEDSAVFA 477
           P   SP F  H F+ +S   I+   V D ++FA
Sbjct: 31  PAGRSPAFLPHHFTKRSFFDIQCKGVYDKSIFA 63


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 191 QRRSSIKLKHKRELWKGQLNLRNHRYSLRKCSPA 292
           +R+  I  +++R  WK    L N +   RK +PA
Sbjct: 274 ERQIKIWFQNRRMKWKKDNKLPNTKNVRRKTNPA 307


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 191 QRRSSIKLKHKRELWKGQLNLRNHRYSLRKCSPA 292
           +R+  I  +++R  WK    L N +   RK +PA
Sbjct: 274 ERQIKIWFQNRRMKWKKDNKLPNTKNVRRKTNPA 307


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 121 KQKQTQKEVVGDKEITRKITSTETTEIEHKAQTQER 228
           ++ + +KE+   KEI  +       +  HK Q QE+
Sbjct: 57  RRMKLKKELRAVKEINEQARREREEQERHKQQQQEK 92


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 348 QGFAIELNFESSLFMFKHTAGLHFLSEYRWFRRF 247
           +G   +LN  + +FM     G H+LS Y W + F
Sbjct: 130 KGLNKKLNTLTVVFMLI-ALGEHWLSRYSWAKVF 162


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 348 QGFAIELNFESSLFMFKHTAGLHFLSEYRWFRRF 247
           +G   +LN  + +FM     G H+LS Y W + F
Sbjct: 130 KGLNKKLNTLTVVFMLI-ALGEHWLSRYSWAKVF 162


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 121 KQKQTQKEVVGDKEITRKITSTETTEIEHKAQTQER 228
           ++ + +KE+   KEI  +       +  HK Q QE+
Sbjct: 208 RRMKLKKELRAVKEINEQARREREEQERHKQQQQEK 243


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 121 KQKQTQKEVVGDKEITRKITSTETTEIEHKAQTQER 228
           ++ + +KE+   KEI  +       +  HK Q QE+
Sbjct: 267 RRMKLKKELRAVKEINEQARREREEQERHKQQQQEK 302


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 455 SKIPLCLLLWLKIEVGL 505
           S+ PL L  W KIE+ L
Sbjct: 114 SRWPLFLNEWTKIEINL 130


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 100 RARSIPKDPVFLAFESPSF 44
           +A   P +P+++  ESP+F
Sbjct: 100 KAEVPPSNPIYIHPESPNF 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.130    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,223
Number of Sequences: 336
Number of extensions: 2408
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)

- SilkBase 1999-2023 -