Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31952
(505 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0659 + 27008867-27008963,27011209-27011280,27011833-270119... 32 0.23
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 30 0.92
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155... 30 0.92
06_03_0151 + 17270688-17270698,17271149-17271281,17271548-172715... 29 1.6
05_01_0254 - 1938343-1938447,1938545-1938700,1939209-1939472,193... 29 1.6
04_04_0996 + 29990255-29990425,29990797-29990841,29991024-299910... 29 2.1
08_02_0854 - 21905054-21906308,21906396-21907300 29 2.8
04_03_0733 + 19116771-19116957,19117733-19117858,19117946-191180... 29 2.8
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 28 3.7
01_05_0606 - 23607170-23607568,23607738-23607941,23608035-236081... 28 3.7
12_01_0095 + 745244-745590,745697-745706 27 8.6
11_01_0095 + 714534-714880,714987-714996 27 8.6
03_06_0681 - 35512161-35512753,35512882-35513380 27 8.6
02_05_1234 - 35127322-35128378,35128423-35128467,35130016-351302... 27 8.6
>04_04_0659 +
27008867-27008963,27011209-27011280,27011833-27011907,
27012071-27012181,27012609-27012713,27012997-27013049,
27013549-27013674,27013742-27013861
Length = 252
Score = 32.3 bits (70), Expect = 0.23
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +1
Query: 103 KEVHVAKQKQTQKEVVGDKEITRKITSTETTEIEHKAQTQERVVEGPVKPSKPPIFTKKM 282
K + V K K T + G ++T T E+ K +T E + + TKK
Sbjct: 17 KNMEVKKIKSTTNNLPGADRTKSQVTGNTTEELRRK-KTVEGTISAVESTKDIKLDTKKK 75
Query: 283 QPCRVFEHEQARFE 324
+P ++ HE+ + E
Sbjct: 76 EPLQMKSHEEVQDE 89
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 30.3 bits (65), Expect = 0.92
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 34 QRVQKKVTQKPRIPDPSESTVHGKEVHVAKQKQTQKEVVGDKEITRKITSTETTEIEHKA 213
++ +K+ T + +E + EV V + T+K +V DKE+ + T ETT A
Sbjct: 911 EKTEKEATAEALADKTTEGEITA-EVQVEETTTTEK-IVEDKELAEETTEGETTAEVQVA 968
Query: 214 QT--QERVVE 237
+T E++VE
Sbjct: 969 ETTSTEKIVE 978
>05_04_0226 +
19215091-19215172,19215281-19215394,19215508-19215590,
19215682-19215820,19215862-19216191,19216414-19216693,
19216795-19216956,19217134-19217349,19217458-19217495,
19217597-19217760,19217833-19217946,19218042-19218083,
19218180-19218983
Length = 855
Score = 30.3 bits (65), Expect = 0.92
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 130 QTQKEVVGDKEITRKITSTETTEIEHKAQTQERVVEGPVKPSKPPIFTKKMQP--CRVFE 303
+T +E + + E T K E+E++ +++ + +KPP+ + +P R+
Sbjct: 569 KTLQEKIREAEQTSKTYQQRVRELENELANEKKAARDTARSTKPPLAPMRQRPPLGRIGN 628
Query: 304 HEQARFEVEFDGEPLPLIKWYRENFPI 384
H + + P I+ +EN P+
Sbjct: 629 HIPPKAPLRLRLSKAPTIQ-NKENIPV 654
>06_03_0151 +
17270688-17270698,17271149-17271281,17271548-17271589,
17271706-17271815,17271957-17272035,17272114-17272287,
17272386-17272466,17272761-17272988,17273067-17273402,
17273501-17273586,17273642-17273783,17274596-17274687,
17274770-17274904,17275142-17275304,17275393-17275482,
17275568-17275753,17276109-17276141,17276700-17276762,
17276839-17276901,17276983-17277042,17277258-17277410,
17277530-17277613,17278434-17278610,17278685-17278791,
17278858-17279071,17279158-17279261,17279926-17280061,
17280191-17280316,17280682-17280792,17280968-17281066,
17281367-17281633,17281707-17281822,17281853-17282084,
17282597-17282664,17282682-17282807,17282980-17283040
Length = 1495
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 106 EVHVAKQKQTQKEVVGDKEITRKITSTETTEIEHKAQTQERVVEGPVKPSKPPIFTKKMQ 285
E V+KQ + K+ + I RK +HK E VE P +P+ +FTK +Q
Sbjct: 319 ETKVSKQLK-DKKYFSVERIQRKKRDIVQLLKKHKPTVMEAQVETPKQPTVLDLFTKSLQ 377
Query: 286 P---CRVFEHEQARF 321
C V + +F
Sbjct: 378 EQDNCEVLSRKLFKF 392
>05_01_0254 -
1938343-1938447,1938545-1938700,1939209-1939472,
1939563-1939777,1939863-1940672,1941758-1942388
Length = 726
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 100 GKEVHVAKQKQT-QKEVVGDKEITRKITSTETTEIEHKAQTQERVVEGPVKPSK 258
GKEV ++ + +KE G E+T + + IE ++RVV GP K +K
Sbjct: 164 GKEVEEGRKVEIMEKEAAGTGEVTLQEWIGPSDAIEGYVPRRDRVVGGPKKEAK 217
>04_04_0996 +
29990255-29990425,29990797-29990841,29991024-29991098,
29991481-29991691,29992057-29992442,29993202-29993425,
29993529-29993664,29993699-29993761,29993842-29994021
Length = 496
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 438 DQYRLGTKCMNLEVRRVFNREILPIPFNQRQGFAIELNFESSLFMFK 298
D+ +G KCM +E + ++ +PF + FA ++N + + K
Sbjct: 277 DRRHIGEKCMTIEEKLNSLQDRTVVPFLSKDSFASKMNLSNEISSIK 323
>08_02_0854 - 21905054-21906308,21906396-21907300
Length = 719
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +1
Query: 76 DPSESTVHGKEVHVAKQKQTQKEVVGDKEITRKITSTETTEIEHKAQTQERVVEGPVKPS 255
DPS ST + + + + +Q +++GD E+ RK EI + + + + GP +P
Sbjct: 17 DPSPSTENLSQPKRPRAEFSQSDIIGDPEL-RKPIEAYPPEIRDQVK-RAYALSGPTQPD 74
Query: 256 KPPIFTKKMQ 285
IF +K Q
Sbjct: 75 -ITIFPRKWQ 83
>04_03_0733 +
19116771-19116957,19117733-19117858,19117946-19118061,
19118395-19118483,19118692-19118743,19119361-19119829,
19120985-19121367,19121450-19122132,19122561-19123152,
19123255-19123638,19124106-19124114
Length = 1029
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -3
Query: 419 LNV*IWKSGEFLIGKFSRYHLIKGKGSPSNSTSNLACSCSNTRQGCIFLVNIGGFE 252
LNV W E L K ++ +K +G +ACS S QG I L++ G+E
Sbjct: 620 LNVSDWIMEELLKSKLQQWLSVKLQGY-----DGIACSLSKHEQGIIHLISALGYE 670
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/53 (22%), Positives = 31/53 (58%)
Frame = +1
Query: 103 KEVHVAKQKQTQKEVVGDKEITRKITSTETTEIEHKAQTQERVVEGPVKPSKP 261
+ +H +K ++ +++ + D+ ++ S + E A+ +ER+ +GP +P+ P
Sbjct: 140 ESIHKSKAEKAREKTLSDQFEAKRAKSKASRE-RKIARREERLAQGPREPAAP 191
>01_05_0606 -
23607170-23607568,23607738-23607941,23608035-23608113,
23608371-23608430,23608514-23608611,23608703-23608891,
23610670-23611368
Length = 575
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 136 QKEVVGDKEITRKITSTETTEI-EHKAQTQERVVEGPVKPSKPP 264
QK + ++ RK+ E + +H+A+T RV EG ++ PP
Sbjct: 512 QKPISDEQVQVRKLELQELVSMFQHEAETHARVKEGVLRTDLPP 555
>12_01_0095 + 745244-745590,745697-745706
Length = 118
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 356 IKGKGSPSNSTSN--LACSCSNTRQGCIFLVNIGGFEGLTG 240
+KG + + +T++ AC C T G I +N+G G+ G
Sbjct: 58 VKGLNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPG 98
>11_01_0095 + 714534-714880,714987-714996
Length = 118
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 356 IKGKGSPSNSTSN--LACSCSNTRQGCIFLVNIGGFEGLTG 240
+KG + + +T++ AC C T G I +N+G G+ G
Sbjct: 58 VKGLNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPG 98
>03_06_0681 - 35512161-35512753,35512882-35513380
Length = 363
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Frame = +1
Query: 49 KVTQKPRIPDPSESTVHGKEVHVAKQKQTQKEV-VGDKEITRKITSTETTEIEHKAQTQE 225
++T P P S +H ++ Q ++ + + TETT + + + E
Sbjct: 38 ELTTLPEAPKLSVLNIHEGNQQISLQAASRYTTSLSSLHLHLSTDGTETTSVAKQQDSSE 97
Query: 226 RVVEGPVKPSKPPIFTKKMQPCR-VFEHEQA 315
V+E K P+ + C +F H A
Sbjct: 98 LVIEDEKWNHKSPLELMNLNGCNLLFSHPSA 128
>02_05_1234 -
35127322-35128378,35128423-35128467,35130016-35130275,
35130610-35131365,35132115-35132122,35133559-35134327
Length = 964
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 371 SRYHLIKGKGSPSNSTS 321
+RYHLIKG GS + TS
Sbjct: 127 ARYHLIKGSGSKATITS 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.130 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,007,252
Number of Sequences: 37544
Number of extensions: 262680
Number of successful extensions: 664
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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