Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31952
(505 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 33 0.001
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 33 0.001
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 33 0.001
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 29 0.027
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 25 0.34
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 24 1.0
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 23 1.8
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 9.6
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 9.6
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 33.5 bits (73), Expect = 0.001
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +1
Query: 337 GEPLPLIKWYRENFPIKNSPDFQIHTFSTK-----SILIIRQVFVEDSAVFAAVAENRGG 501
G P P + W + F + + F I + T S + I V VED ++ +AENR G
Sbjct: 447 GNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAG 506
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 33.5 bits (73), Expect = 0.001
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +1
Query: 337 GEPLPLIKWYRENFPIKNSPDFQIHTFSTK-----SILIIRQVFVEDSAVFAAVAENRGG 501
G P P + W + F + + F I + T S + I V VED ++ +AENR G
Sbjct: 447 GNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAG 506
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 33.5 bits (73), Expect = 0.001
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 307 EQARFEVEFDGEPLPLIKWYRENFPIKNSPDFQIHTFSTKSILIIRQVFVEDSAVFAAVA 486
E+A GEPLP ++W + + + + + + LII+ V D+ + A
Sbjct: 417 EEANIRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIKNVDYADTGAYMCQA 476
Query: 487 ENRGG 501
+ GG
Sbjct: 477 SSIGG 481
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 158 LSPTTSF*VCFCFATC 111
LSP ++ VC C C
Sbjct: 95 LSPNSTIAVCVCMRKC 110
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/46 (17%), Positives = 20/46 (43%)
Frame = +1
Query: 307 EQARFEVEFDGEPLPLIKWYRENFPIKNSPDFQIHTFSTKSILIIR 444
+ + + G P P + W R ++ + +I F+ S+ + +
Sbjct: 326 DNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTK 371
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 29.1 bits (62), Expect = 0.027
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 337 GEPLPLIKWYR--ENFPIKNSPDFQIHTFSTKSILIIRQVFVEDSAVFAAVAENRGG 501
G P+P+ +WY+ E + LIIR+ VEDS + + N G
Sbjct: 238 GFPVPVHRWYKFIEGSSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIVNNSVG 294
Score = 21.4 bits (43), Expect = 5.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 313 ARFEVEFDGEPLPLIKW 363
AR E + DG P P + W
Sbjct: 696 ARVECKADGFPKPQVTW 712
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 25.4 bits (53), Expect = 0.34
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 70 IPDPSESTVHGKEVHVAKQKQTQKEV 147
I P+E++ H E H++ ++ QKE+
Sbjct: 148 IRTPTEASWHSPEAHISVAQKLQKEI 173
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 23.8 bits (49), Expect = 1.0
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +1
Query: 337 GEPLPLIKWYRENFPIKNSPDFQIHTF-----STKSILIIRQVFVEDSAVFAAVAENR 495
G P P I W ++ + + FQ+H + + KS + I +D+ + A+N+
Sbjct: 48 GFPRPEITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDAGYYECQADNQ 105
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 23.0 bits (47), Expect = 1.8
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -2
Query: 288 GLHFLSEYRWFRRFNW 241
G+ + +++WF FNW
Sbjct: 616 GISEIQKHKWFDGFNW 631
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 20.6 bits (41), Expect = 9.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 6 LDQXRGSNGTKGAKEGDSKAKNTGSFGIDRARQRSARCE 122
L + RG+ T+ +E +K ++ + +ARQR A+ E
Sbjct: 121 LGRKRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVE 159
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +2
Query: 278 KCSPAVCLNMNKLDSKLSSMANPCL 352
+CS C+ + + S +NPCL
Sbjct: 84 QCSCNKCIGCSAEKFECSKTSNPCL 108
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.314 0.130 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,445
Number of Sequences: 438
Number of extensions: 2801
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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