Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31947
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 41 1e-04
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 38 7e-04
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 35 0.008
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 35 0.008
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 34 0.015
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 33 0.019
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 33 0.033
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||... 31 0.10
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 30 0.18
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 30 0.18
SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual 30 0.24
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 29 0.31
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 29 0.31
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po... 29 0.55
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 28 0.72
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 0.95
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 28 0.95
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 27 1.3
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 27 1.3
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 1.3
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 27 1.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 1.3
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 27 1.7
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 27 1.7
SPBC1A4.09 |||pseudouridine synthase|Schizosaccharomyces pombe|c... 26 2.9
SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces... 26 2.9
SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit Snu23|... 26 2.9
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 26 2.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 2.9
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 26 2.9
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 26 3.8
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 26 3.8
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 26 3.8
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 26 3.8
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 26 3.8
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 25 5.1
SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomy... 25 5.1
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 25 5.1
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 5.1
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 5.1
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 25 5.1
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 25 6.7
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 6.7
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 25 6.7
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 25 6.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 6.7
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 6.7
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 25 8.9
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 8.9
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 25 8.9
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 8.9
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 41.1 bits (92), Expect = 1e-04
Identities = 40/161 (24%), Positives = 83/161 (51%)
Frame = +3
Query: 6 KQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 185
+QR ++ R+++ A++++ +L+ +++ +K ++K E + +R+K K+Q
Sbjct: 553 EQRVLQAYREKV--AQQRQAKLLEEIEEENKRKQERELKKIREK------EKKRDK-KKQ 603
Query: 186 LEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 365
L+ K+ R E + L K QE E K E ++ E+ +K+Q+ + ++
Sbjct: 604 LKLAKEEERQRREAERLAEQAAQKALEAKRQE--EARKKREEQRLKREQEKKQQELERQK 661
Query: 366 LKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRV 488
+E+QKQ+ R K LKK EA K + ++ + E+R+
Sbjct: 662 REEKQKQKEREKKLKK-QQQEADREKMAREQRLREEEEKRI 701
Score = 27.9 bits (59), Expect = 0.95
Identities = 28/140 (20%), Positives = 64/140 (45%)
Frame = +3
Query: 3 KKQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 182
K +IEE+ +R +E E K+ + +D K + K+ E +L ++
Sbjct: 571 KLLEEIEEENKRKQERELKKIREKEKKRDKKK---QLKLAKEEERQRREAERLAEQAAQK 627
Query: 183 QLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLK 362
LE +++ + + ++ + +K QEL + + ++ + E++ K+Q +
Sbjct: 628 ALEAKRQEEARKKREEQRLKR----EQEKKQQELERQKREEKQKQKEREKKLKKQQQEAD 683
Query: 363 ELKERQKQQLRHKALKKGLD 422
K ++Q+LR + K+ L+
Sbjct: 684 REKMAREQRLREEEEKRILE 703
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 38.3 bits (85), Expect = 7e-04
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Frame = +3
Query: 9 QRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTKEQ 185
+R+ EEK +R E + KR+A +A ++A + ++K++ A+ E K K +
Sbjct: 570 KREAEEKAKREAEEKAKREAEEKAKREAEENAKR-EAEEKAKREAEEKAKREAEEKAKRE 628
Query: 186 LEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKR--QDYDL 359
EE+ K + K E K +++A+E + + E K + EE+ KR ++
Sbjct: 629 AEEKAKREAEEKAKREAEE-----KAKREAEEKAKREAE-ENAKREAEEKAKREAEENAK 682
Query: 360 KELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVA---SKYERRVDT 494
+E +E+ K++ A +K + P+I+ + + E VDT
Sbjct: 683 REAEEKVKRETEENAKRKAEEEGKREADKNPEIKSSAPLASSEANVDT 730
Score = 35.5 bits (78), Expect = 0.005
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 KKQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTK 179
K +R+ EEK +R E + KR+A A ++A + ++K++ A+ E K K
Sbjct: 576 KAKREAEEKAKREAEEKAKREAEENAKREAEEKAKR-EAEEKAKREAEEKAKREAEEKAK 634
Query: 180 EQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDL 359
+ EE+ K + K E K +++A+E + + E K + EE KR+ +
Sbjct: 635 REAEEKAKREAEEKAKREAEE-----KAKREAEENAKREAE-EKAKREAEENAKREAEE- 687
Query: 360 KELKERQKQQLRHKALKKG 416
++K ++ + KA ++G
Sbjct: 688 -KVKRETEENAKRKAEEEG 705
Score = 33.5 bits (73), Expect = 0.019
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Frame = +3
Query: 9 QRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQK-KSENFGLSNAQLERNKTKEQ 185
+R EEK + E KR+A QA ++A + +K K E + + E N K +
Sbjct: 546 KRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEEN-AKRE 604
Query: 186 LEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE---KYDLEERQKR--QD 350
EE+ K + K E + + +KA+ E K E E K + EE+ KR ++
Sbjct: 605 AEEKAKREAEEKAK-REAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEE 663
Query: 351 YDLKELKERQKQQLRHKALKK 413
+E +E+ K++ A ++
Sbjct: 664 NAKREAEEKAKREAEENAKRE 684
Score = 31.9 bits (69), Expect = 0.059
Identities = 26/110 (23%), Positives = 46/110 (41%)
Frame = +3
Query: 3 KKQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 182
K +R+ EEK +R E KR+A +A ++A + +K + + + K
Sbjct: 648 KAKREAEEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKR 707
Query: 183 QLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEE 332
+ ++ +I S PL +VD +Q E + K + EK E
Sbjct: 708 EADKNPEIKSS---APLASSEANVDTSKQTNATEPEVVDKTKVEKLKASE 754
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 34.7 bits (76), Expect = 0.008
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +3
Query: 27 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE-QLEEEKK 203
++++LE K + LQ ++D KT + S + A LE + E ++EE K
Sbjct: 29 QKEKLEGDLKTQIKKLQRLRDQIKTWAS------SNDIKDKKALLENRRLIEAKMEEFKA 82
Query: 204 ISLSIRIKPLTIEGLSV-DKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQ 380
+ ++IK + EGLS+ KL K +E + I + +LE + + + + + LK
Sbjct: 83 VEREMKIKAFSKEGLSIASKLDPKEKEKQDTIQWISNAVEELERQAELIEAEAESLKATF 142
Query: 381 KQ 386
K+
Sbjct: 143 KR 144
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 34.7 bits (76), Expect = 0.008
Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +3
Query: 156 QLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEER 335
+L+R K ++Q E+EKK+ +I ++ L +KL ++ L E + E L E+
Sbjct: 97 RLKREKERQQREQEKKLREQEKIAAKKMKEL--EKLEKERIRLQEQQRRKEERDQKLREK 154
Query: 336 QKRQDYDLKELKERQKQQLR-HKALKKGLD 422
++ Q +++ +++QQL+ + KG++
Sbjct: 155 EEAQRLRQEQILNKERQQLKLNNFFTKGVE 184
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 33.9 bits (74), Expect = 0.015
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +3
Query: 21 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 200
EEKR+++EE++K + +LQA + K N + KKS + + KE+ + EK
Sbjct: 138 EEKRRKIEESDKWHRVLLQA--EGKKLKDNEQLLKKSIRRKEKEKKKSSDAWKERKDNEK 195
Query: 201 KISL 212
K L
Sbjct: 196 KAML 199
Score = 25.8 bits (54), Expect = 3.8
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 266 TEGPGTLGVHRQTRDREIRSRREAKE---TGLRLKRAQRKTKAATEAQS-SQEGSRPRSA 433
TEG L + + RS+R+A E L L+R + K KA EA+ +++ S+ +
Sbjct: 4 TEGKNDLRAKLAEKIQTFRSQRKATEKVDRALLLQRRKEKAKARAEAKKLAKKESKAKQE 63
Query: 434 HRQAPAQNSSS 466
+ A +S
Sbjct: 64 SKVAAYDTGNS 74
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 33.5 bits (73), Expect = 0.019
Identities = 29/139 (20%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +3
Query: 9 QRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 188
++ + E +L+ ++K+ + D+ + +QK +S + E+ + ++
Sbjct: 70 KKSLSEAETKLKRLDEKQATPELQVSDSKEMEEQLELQKSQFEKRISILEKEKEDLQRKM 129
Query: 189 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKEL 368
EE S+ + +E LS Q++Q + E K + E DL+E ++ ++ K
Sbjct: 130 EELTVESMEVVRLTRQVETLSTQYSIQRSQWVRE-DEKKKKEIQDLKELYEKSEHGAKNW 188
Query: 369 -KERQKQQLRHKALKKGLD 422
+ER+ Q + + K LD
Sbjct: 189 ERERETFQNQVSQMSKQLD 207
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 32.7 bits (71), Expect = 0.033
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 4/164 (2%)
Frame = +3
Query: 3 KKQRDIEEKRQRLEEAEKKRQAML---QAMKDASKTGPNFTIQK-KSENFGLSNAQLERN 170
K Q ++E +R E+ ++ QA + K A + T+ + + ++ LS +R
Sbjct: 272 KSQEELELIAERKRESGRRLQAQAAIKRKEKAAERDRELATLTELQQQSLVLSRRAFQRA 331
Query: 171 KTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQD 350
+ E+E +++ ++ I D+ RQ+ E L+ + D+E+ +
Sbjct: 332 LEEAGFEDESQLNAQVKNVQAKIRRAQRDQQRQEESE-----GSLDVTEIDVEQAFPLLN 386
Query: 351 YDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYER 482
EL E +Q RH+ L K + K I+ A++ ER
Sbjct: 387 VPDAELDEAGLRQKRHQRLMKANYDARVRAKAEKAIEEAAEAER 430
>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 31.1 bits (67), Expect = 0.10
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 278 GTLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQE 412
GTLG +Q +RE +S R+ K L K A+R+ + E + ++
Sbjct: 82 GTLGKFQQESEREQKSARKVKRAELEEKLAKRREQELQELEKQEK 126
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 30.3 bits (65), Expect = 0.18
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +3
Query: 267 QKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLD 422
++AQE++ ++ L E D+E+ Q Q + L+E ++++LRH L+K LD
Sbjct: 906 KRAQEMYANVL-LGVE--DMEDDQFSQRCERMALREAERRKLRHGKLQKHLD 954
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 30.3 bits (65), Expect = 0.18
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 15 DIEEKRQRLEEAEKKRQAMLQAMKD----ASKTGPNFTIQKKSENFGLSNAQLERNKTKE 182
++EEK LE A+ Q ++ ++KD +K + ++ G+S+A L + K K
Sbjct: 162 ELEEKINSLESAQSIEQEVISSLKDDKTVETKNDVPEVSRPSTDTIGVSSA-LSKKKKKR 220
Query: 183 QLEEEKKISLSIRIKPLT 236
+ +KK S I+ T
Sbjct: 221 NRKNQKKKSTKQNIEATT 238
>SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 29.9 bits (64), Expect = 0.24
Identities = 19/72 (26%), Positives = 42/72 (58%)
Frame = +3
Query: 171 KTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQD 350
KT E+LE+E + ++S +++ L G D +A +L + + YD E++QK ++
Sbjct: 168 KTAEELEKEDREAMSAKLQELIRRGTPADLA--EANKLMKVMAG-----YDTEQKQKYKE 220
Query: 351 YDLKELKERQKQ 386
+ L +L++ +++
Sbjct: 221 HVLVDLEKVKRK 232
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 29.5 bits (63), Expect = 0.31
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 6 KQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQL--ERNKTK 179
KQ++++EKR E K ++ L+A K+ + I K+ N L E +
Sbjct: 521 KQKEVKEKRNTRREKRKSKKEFLKAQKNEASNNLKQEIVSKAGAQETENDDLIDEESDAL 580
Query: 180 EQLEEE 197
+LEE+
Sbjct: 581 SELEED 586
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 29.5 bits (63), Expect = 0.31
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Frame = +3
Query: 300 KLETEKYDL---EERQKRQDYDLKELKERQKQQLRHKALKKG------LDPEALTGKHPP 452
KLETEK + EE+++++ D K+ KE K + K ++ LTG+ PP
Sbjct: 173 KLETEKLEANNKEEKEEKEGKDDKDDKEDSNDTKNDKKISKNEVDSSLIEASPLTGQVPP 232
Query: 453 K 455
K
Sbjct: 233 K 233
>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 218
Score = 28.7 bits (61), Expect = 0.55
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +3
Query: 3 KKQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 182
K + + EK+ + K A ++A + ASK+G T S+N L + +R + K
Sbjct: 111 KVLQSLHEKKVIDDNQYKDAMATVEAHEQASKSGDTSTSGAISKNDILKRIEEDRERHKR 170
Query: 183 QLEEEKKIS---LSIRIKPLTIEGLS---VDKLRQKAQELWECI 296
E IS L I T +G++ ++ L+ + ++ EC+
Sbjct: 171 MRENIWAISEPELEAEIAWNTTQGITESDLESLKDEYEKFNECL 214
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 28.3 bits (60), Expect = 0.72
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 39 LEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 200
+EE E+ R+ + A D + G + +S+ G + +++ KTK+QLEEE+
Sbjct: 197 VEEQERLRKETIAAFHDVN--GNKDAVSNESDEDG--DFLVKKEKTKKQLEEEE 246
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.9 bits (59), Expect = 0.95
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Frame = +3
Query: 3 KKQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS-ENFGLSNAQLERNKTK 179
K Q +E+ Q + +K + + + A+K + T +KK+ +++ ++E + K
Sbjct: 385 KLQAHLEKFEQTERDISEKNEEVKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEE-QLK 443
Query: 180 EQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECI--VKLETEKYDLEERQKRQDY 353
L +EKK+ S IE LS +K + I KL +E DL R ++++
Sbjct: 444 FLLNKEKKLKKS-------IEALSFEKSEAENSLSSHDIDSQKLNSEIADLSLRLQQEEL 496
Query: 354 DLKELKE 374
L ++++
Sbjct: 497 SLDDIRK 503
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 0.95
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 132 ENFGLSNAQLERNKT-KEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLE 308
EN L + L+R K E+L + + + + + +T E L QKA E E I KLE
Sbjct: 366 ENTSLESQLLKREKQLSEELAKLRSTNAQLTDR-ITQESKKASFLEQKASEQEEVIRKLE 424
Query: 309 TEKYDLE 329
+ D++
Sbjct: 425 KDLADVD 431
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/82 (23%), Positives = 39/82 (47%)
Frame = +3
Query: 264 RQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGK 443
++K++++ E + K E +L+ + LKE ++QK+ L+ K + D L+ K
Sbjct: 19 KRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEAD---LSQK 75
Query: 444 HPPKIQVASKYERRVDTRSYDD 509
H + Q K + + +D
Sbjct: 76 HATERQKLDKGDEETNETQQED 97
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.5 bits (58), Expect = 1.3
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 8/158 (5%)
Frame = +3
Query: 6 KQRDIEEKRQ-RLEEAEKKRQAMLQAMKDASKTGPNFTIQKK---SENFGLSNAQLERNK 173
+QRDI EKR R ++ E + AM + S+ T+ +K S+ + L + LE K
Sbjct: 34 RQRDIHEKRAVRKQKMEDIKGAMAMNRRLLSRISEMETVLEKESPSDPYVLLGSFLEAKK 93
Query: 174 TKEQLEEEKKISLSIR---IKPLTIEGLSVDKLRQKAQELWE-CIVKLETEKYDLEERQK 341
+ E ++ +S + L + + D +K+ + + C+ +L++ K L + +
Sbjct: 94 S-EDMDSAIPGGMSYHHMLMSLLKVIKDAEDTTEEKSMDDSDKCLRRLKSHKERLLKLLE 152
Query: 342 RQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPK 455
+ L+ K + + L G D + K P K
Sbjct: 153 DAQKEYDTLEAESKNYITSEDLHLGFDSTYVQKKEPEK 190
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 27 KRQRLEEAEKKRQAMLQAMKDAS---KTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 197
K + +++R A +QA+ D S +T + + +SEN GL N ++ +QLE+E
Sbjct: 232 KDHEILRLKEERTAAMQAIDDISGTIETIKSDCYKVESENKGLINEVMDMRNFVQQLEQE 291
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 303 LETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPP 452
LE ++YD+EE D DL+EL ++ + + ++ ++ +A G+ P
Sbjct: 84 LELDRYDIEELD--DDNDLEELDIGARRAVDARLRRRDIELDAAAGRTKP 131
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 1.3
Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +3
Query: 9 QRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 188
+RD + K+ +++ EK Q + + +S + K ++ + E N +EQ+
Sbjct: 449 ERDFQNKK--IKDFEKIEQDLRACLNSSSN-------ELKEKSALIDKKDQELNNLREQI 499
Query: 189 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQ-ELWE 290
+E+KK+S S + +++ L D L +K + E++E
Sbjct: 500 KEQKKVSESTQ---SSLQSLQRDILNEKKKHEVYE 531
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.1 bits (57), Expect = 1.7
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 186 LEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 365
+EE +I +S+ +KPL I K A + V E + Y+ ++Q++++ + K+
Sbjct: 13 IEETNRIRISLGLKPLDISEEKPQKELSDA-SVKSSYVDQEQQAYENWKKQEQEEINRKK 71
Query: 366 LKERQK--QQLRHK 401
+E + ++LR K
Sbjct: 72 EEELKSKFEKLRQK 85
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 105 PNFTIQKKSENFGLSNAQLERNKTKEQLEE-EKKISLSIRIKPLTIEGL 248
P FTI++K +NF ++N ERN ++L + ++ + ++ I+ L
Sbjct: 490 PGFTIEQKDKNFSINN---ERNNFLQKLSTLDSSLAALVNVQRKLIKAL 535
>SPBC1A4.09 |||pseudouridine synthase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 680
Score = 26.2 bits (55), Expect = 2.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 257 QTPTEGPGTLGVHRQTRDREIRSRREAK 340
++ T+G GT V + TR + RSRR+ +
Sbjct: 203 ESSTKGNGTFTVSKTTRKNQPRSRRDPR 230
>SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 289
Score = 26.2 bits (55), Expect = 2.9
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Frame = +3
Query: 177 KEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWEC--------IVKLETEK--YDL 326
+EQ E +K+ I+ + ++G V+K ++ E E K+E K Y L
Sbjct: 15 EEQRNEIEKLKNLTGIEEVHVDGAKVNKRKRTFDEQSEITKDYIEYDFSKIEDTKGGYLL 74
Query: 327 EE------RQKRQDYDLKELKERQKQQLRHKALKKGLDPE 428
EE R+K + +L+E +ERQK +LR L LDPE
Sbjct: 75 EEKKVEDLREKPAERELREQEERQK-KLRLAPL--NLDPE 111
>SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit
Snu23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 26.2 bits (55), Expect = 2.9
Identities = 16/74 (21%), Positives = 38/74 (51%)
Frame = +3
Query: 3 KKQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 182
K + I EKR LEE +++ + + + + K ++++++ E + + +LE K +
Sbjct: 60 KTRTVIIEKRATLEEVKERMEYWRRQLLEPEKGSEEYSLKERVERY---HQELEAKKLRR 116
Query: 183 QLEEEKKISLSIRI 224
+ ++ K S R+
Sbjct: 117 KQKKVNKEKNSPRL 130
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 26.2 bits (55), Expect = 2.9
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 3 KKQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 182
KK IE + + E EKK A ++ + + F IQK ++ L+ +L K+
Sbjct: 44 KKYDQIESEYKTNIENEKK--AFIKDVSQVQQKIKEFEIQKANQIKQLNEEKLSIEARKQ 101
Query: 183 QLEEE 197
QLE E
Sbjct: 102 QLEIE 106
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 2.9
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -1
Query: 291 TPRVPGPSVGVCRRRDPRWSAA*CGWTGRSSSPLPAAPWSC 169
TP VP S P S + TG SSSPLP+ SC
Sbjct: 302 TPTVPPTSTSSTSTPPPPASTS---STGTSSSPLPSTSTSC 339
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 213 TGRSSSPLPAAPWSC 169
TG SSSPLP+ SC
Sbjct: 101 TGSSSSPLPSTSTSC 115
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 26.2 bits (55), Expect = 2.9
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +3
Query: 3 KKQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER---NK 173
K QR+ E RQ+ EE ++++QAM +A + A+ T ++ SE LS + +R K
Sbjct: 49 KLQRE-RELRQKYEEEQRRQQAM-EAKRIAAST------RQTSERPPLSAEEAKRIREVK 100
Query: 174 TKEQLEEEK 200
K++LE +K
Sbjct: 101 EKDRLESKK 109
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 25.8 bits (54), Expect = 3.8
Identities = 16/82 (19%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +3
Query: 159 LERNKTKEQLEEEK----KISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYD- 323
++ ++K+Q+++ + K ++ P ++ D + + E + ++E EK +
Sbjct: 113 MQERQSKKQIQDRESDYQKQRYDRQLTPTRVDAFQPDGTQSNGRSYAEVMRQVELEKEER 172
Query: 324 ---LEERQKRQDYDLKELKERQ 380
+E Q+R++ LKE++E +
Sbjct: 173 RVHMELNQRRREGTLKEVEEEE 194
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 318 YDLEERQKRQDYDLKELKERQKQQLRHKALKK 413
Y+ E+R KRQ+ E + R+K++ R A +K
Sbjct: 242 YEREQRAKRQEQFRLERENREKEKRRIAAQRK 273
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 25.8 bits (54), Expect = 3.8
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK--EQLEE 194
EEK +++EE E + + ++D K+ +++K S A+ +R+ + E LE+
Sbjct: 132 EEKDRKIEEGELTSEEEKEPIQDLRKSHKRKSVEKSSVPNKKHKAERKRSPSPKIEILED 191
Query: 195 EKKI 206
+++I
Sbjct: 192 DEEI 195
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 25.8 bits (54), Expect = 3.8
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +3
Query: 117 IQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRI-KPLTIEGLSVDKLRQKAQELWEC 293
++K+ NA++E+ + +EEE++ I I + E + KL ++ +E+ E
Sbjct: 25 LEKEHLRMTQQNAEIEKEDEEYNIEEEEEAERDIEISSESSDEEAELKKLEEEGEEV-EK 83
Query: 294 IVKLETEKYDLEERQKRQDYDLKELKERQKQ 386
I++ + E+ + QK + +L+ + K+
Sbjct: 84 ILR-DEERIKKRKIQKNRAANLQRTLQPPKR 113
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 25.8 bits (54), Expect = 3.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 288 ECIVKLETEKYDLEERQKRQDYDLKELKERQKQ 386
E + KLE E+Y+ + + + +K LK+ Q +
Sbjct: 391 EAMTKLEEERYEFDRHIEATSWTIKSLKKIQNR 423
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 360 KELKERQKQQLRHKALKKGLDPEALTG 440
KE+K+RQ+ Q K +++GL +G
Sbjct: 461 KEIKDRQRTQKEEKVVQRGLTQVLTSG 487
>SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 543
Score = 25.4 bits (53), Expect = 5.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 133 SLFFWMVKLGPVLLASFMAWSIAW 62
SL+FW L P +F++W + +
Sbjct: 111 SLYFWTAYLSPPKYRAFLSWFLGY 134
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 249 SVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRH 398
S++ +R + EC ++ + +EER K D + + E QK++L H
Sbjct: 21 SLNPIRSSLIKQEECYKTVDGDDNPIEERIKACDAGI-QTSEEQKKELEH 69
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.4 bits (53), Expect = 5.1
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +3
Query: 51 EKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKP 230
EK +Q Q K +K + Q N +N LE ++ EEE++I ++ R K
Sbjct: 327 EKNQQRREQQDKGENKKRQDDVDQATDNN---TNTILEDDEKDNDEEEEEEI-VNAREKN 382
Query: 231 LTIEGLSVDKLRQKAQELWECIVKLE 308
L + + + +K E W+ +V+ E
Sbjct: 383 LLNQQFNWTAIVKKLGENWDQLVRFE 408
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.4 bits (53), Expect = 5.1
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +3
Query: 51 EKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKP 230
EK +Q Q K +K + Q N +N LE ++ EEE++I ++ R K
Sbjct: 327 EKNQQRREQQDKGENKKRQDDVDQATDNN---TNTILEDDEKDNDEEEEEEI-VNAREKN 382
Query: 231 LTIEGLSVDKLRQKAQELWECIVKLE 308
L + + + +K E W+ +V+ E
Sbjct: 383 LLNQQFNWTAIVKKLGENWDQLVRFE 408
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 249 SVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKER 377
+V++L+ K +E + + K + EK D EE+ K++ KE+
Sbjct: 208 TVEELQNKGKEKQKELKKGKREKKDEEEKPKKKKQKKSSKKEK 250
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 25.0 bits (52), Expect = 6.7
Identities = 20/94 (21%), Positives = 47/94 (50%)
Frame = +3
Query: 102 GPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 281
G N +++S + + + ++ ++LE K +LS ++ + I+ D+ QKA+
Sbjct: 58 GNNDLEEQRSGSIDSKDKEKPLDEKVKELENANK-TLSDLVRRIQIQR---DEAEQKAEI 113
Query: 282 LWECIVKLETEKYDLEERQKRQDYDLKELKERQK 383
+ + E D+++R ++ D + +LKE +
Sbjct: 114 YNRDALNTKQEHLDIKKRLEKSDETVCKLKEENE 147
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 TIEGLS--VDKLRQKAQELWECIVKLET-EKYDLEERQKRQDYDL 359
T++ L +D L Q + E+ + + +L K LE++QK++ Y+L
Sbjct: 518 TVDSLEMYIDSLEQYSFEVLQQLSQLNVFTKASLEDKQKKEKYNL 562
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 330 ERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPK 455
E++ Q L E+KER+K+ R K ++ E + + K
Sbjct: 36 EKRMEQKRKLDEIKEREKELKREKEEQRAAHAEKIRTRRQAK 77
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 25.0 bits (52), Expect = 6.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 332 EAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQV 475
E + L KR QR + QE R RSA ++A ++N+ +QV
Sbjct: 8 EENDLDLEEKRLQR------QLNEIQEKKRLRSAQKEASSENAEVIQV 49
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.0 bits (52), Expect = 6.7
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 21 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 200
+E+ ++LEE + + L+ ++ + KT QKK+ L E + KE E +K
Sbjct: 608 QEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQKKTRLMILREELQELDAIKE--EAQK 665
Query: 201 KISLSI 218
+IS S+
Sbjct: 666 QISQSL 671
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 25.0 bits (52), Expect = 6.7
Identities = 24/90 (26%), Positives = 42/90 (46%)
Frame = +3
Query: 153 AQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEE 332
A L +N+ +L EE++ R+K + ++++L QK +EL + +K E E
Sbjct: 348 ASLLQNEEFHKLIEERQRQHEERLKRINANKKALEELNQKKRELAQQQLK-EQELL---- 402
Query: 333 RQKRQDYDLKELKERQKQQLRHKALKKGLD 422
QK ++ D K + +H LK D
Sbjct: 403 MQKIKETDRSGNKRLMLLETQHSLLKAEAD 432
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 345 QDYDLKELKERQKQQLR 395
+ Y++KEL E QKQ +R
Sbjct: 24 EGYEIKELNESQKQYIR 40
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 454 KFK*RPSTRGVSTHDPTTTK 513
+FK RPST+ ST D TK
Sbjct: 1086 EFKPRPSTKPFSTQDEVLTK 1105
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 24.6 bits (51), Expect = 8.9
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 51 EKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKP 230
E+KR A QA KDA PN+T K ERN T EE+++ + + +
Sbjct: 326 ERKRNARSQATKDACM--PNYTKLK----------AYERNMTDASPEEKQQFRIKLLNQF 373
Query: 231 LTIEGLSVDKL 263
+E + D++
Sbjct: 374 PKLEDIDEDRM 384
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 120 QKKSENFGLSNAQLERNKTKEQLEEEKKISLSIR 221
++K + Q E N K QLEEE++ +L IR
Sbjct: 1735 REKKDQLLFQRYQKELNGFKVQLEEEREKNLRIR 1768
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,650,363
Number of Sequences: 5004
Number of extensions: 26172
Number of successful extensions: 244
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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