Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31945
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 135 2e-32
SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 30 1.3
SB_15170| Best HMM Match : Spectrin (HMM E-Value=0.64) 30 1.3
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_34152| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.37) 28 5.3
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 28 5.3
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 27 6.9
SB_11187| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-10) 27 6.9
SB_10616| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_5816| Best HMM Match : RVT_1 (HMM E-Value=3e-16) 27 6.9
SB_8962| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_4995| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.062) 27 9.2
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 135 bits (327), Expect = 2e-32
Identities = 73/172 (42%), Positives = 103/172 (59%)
Frame = +1
Query: 1 LKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHSKKIAKYYYASEKTIEKAIQASVDAQ 180
+K+ S ++P++ G+ + G +YQV P DHS KIAKY+ A E +++ I+ +V A+
Sbjct: 46 IKKVQSETVELPVLCGGEKVYTGNVKYQVSPFDHSNKIAKYHVADEALVKETIKRAVAAR 105
Query: 181 TRWDRTPLTERVKIWQTAAELMAGAYRQSLNAATILGQSKSVIQAEIDAAAELIDFFRFN 360
WDRTP ER AG + Q K+V +A+IDA AEL DF+RF
Sbjct: 106 KAWDRTPFEERKH---------AGVELCNF-------QGKTVFEADIDAIAELADFYRFA 149
Query: 361 VHFLKENSKYQPISESPTITKNSLRFRGIDGFIAAISPFNFTAIGGNLAYTP 516
VH+ +E + P P N L++RG++GF+AA+SPFNFTAIGGNLA TP
Sbjct: 150 VHYAREMLQ-GPELHQPKGVSNKLQYRGLEGFVAAVSPFNFTAIGGNLAGTP 200
>SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 1541
Score = 29.9 bits (64), Expect = 1.3
Identities = 36/127 (28%), Positives = 54/127 (42%)
Frame = +1
Query: 133 SEKTIEKAIQASVDAQTRWDRTPLTERVKIWQTAAELMAGAYRQSLNAATILGQSKSVIQ 312
S K+ + A +D + + R L E++K + E Q L A L Q + +
Sbjct: 88 SSKSSKSARDTLIDVRAK--RAALEEKIKFNNSILE-----QEQKL-ANLKLQQELNATK 139
Query: 313 AEIDAAAELIDFFRFNVHFLKENSKYQPISESPTITKNSLRFRGIDGFIAAISPFNFTAI 492
AE E I F + KEN + +SE+ T TK + D + +SPFNF
Sbjct: 140 AEEAVYKEAISLEEFELPIEKENLISRFLSEAQT-TKPVIT----DPIQSCLSPFNFPNT 194
Query: 493 GGNLAYT 513
+L YT
Sbjct: 195 ESSLVYT 201
>SB_15170| Best HMM Match : Spectrin (HMM E-Value=0.64)
Length = 275
Score = 29.9 bits (64), Expect = 1.3
Identities = 36/127 (28%), Positives = 54/127 (42%)
Frame = +1
Query: 133 SEKTIEKAIQASVDAQTRWDRTPLTERVKIWQTAAELMAGAYRQSLNAATILGQSKSVIQ 312
S K+ + A +D + + R L E++K + E Q L A L Q + +
Sbjct: 123 SSKSSKSARDTLIDVRAK--RAALEEKIKFNNSILE-----QEQKL-ANLKLQQELNATK 174
Query: 313 AEIDAAAELIDFFRFNVHFLKENSKYQPISESPTITKNSLRFRGIDGFIAAISPFNFTAI 492
AE E I F + KEN + +SE+ T TK + D + +SPFNF
Sbjct: 175 AEEAVYKEAISLEEFELPIEKENLISRFLSEAQT-TKPVIT----DPIQSCLSPFNFPNT 229
Query: 493 GGNLAYT 513
+L YT
Sbjct: 230 ESSLVYT 236
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 259 RQSLNAATILGQSKSVIQAEIDAAAELIDFFRFNV--HFLKENSKY-QPISESPTITKNS 429
RQ NAA I+ + + +E D A +DF F+V H ++ KY I E PT T +
Sbjct: 730 RQPPNAARIVNEGCTKPASEHDFAGRSVDFAGFHVSDHTIEPLPKYLDAIREFPTPTSTT 789
>SB_34152| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.37)
Length = 341
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +1
Query: 286 LGQSKSVIQAEIDAAAELIDFFRFNVHFLKENSKYQPISESPTITKNSLRFRGIDGFIAA 465
L Q + +AE E I F + KEN + +SE+ T TK + D +
Sbjct: 9 LQQELNATKAEEAVYKEAISLEEFELPIEKENLISRFLSEAQT-TKPVIT----DPIQSC 63
Query: 466 ISPFNFTAIGGNLAYT 513
+SPFNF +L YT
Sbjct: 64 LSPFNFPNTESSLVYT 79
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +1
Query: 286 LGQSKSVIQAEIDAAAELIDFFRFNVHFLKENSKYQPISESPTITKNSLRFRGIDGFIAA 465
L Q + +AE E I F + KEN + +SE+ T TK + D +
Sbjct: 1459 LQQELNATKAEEAVYKEAISLEEFELPIEKENLISRFLSEAQT-TKPVIT----DPIQSC 1513
Query: 466 ISPFNFTAIGGNLAYT 513
+SPFNF +L YT
Sbjct: 1514 LSPFNFPNTESSLVYT 1529
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +1
Query: 37 IVIAGKNITEGEPRYQVMPHDHSKKIAKYYYASEKTIEKAIQASVDAQTRWDR 195
+++ K + E EP+Y+ + DH+ + + E E A + D + +W++
Sbjct: 380 LMMLEKELAEMEPKYRAVKEDHN-ALRDNQFLGEADQEAADEDMHDIEAQWEK 431
>SB_11187| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-10)
Length = 1163
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 141 FFTGIVIFSYLF*VIMGHHLISWLT---FCNIFSGNYNWYVFNY 19
+F I+ + Y F +I H++ S T F +I + +Y++ + Y
Sbjct: 1099 YFFSIITYHYFFVIITHHYIFSIFTHHYFFSIITHHYSFVIITY 1142
>SB_10616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 856
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 61 TEGEPRYQVMPHDHSKKIAKYYYASEKTIE 150
TE P + +PH+ K+ A YY E I+
Sbjct: 603 TEATPNIEAVPHESPKEPATYYRPKEAGID 632
>SB_5816| Best HMM Match : RVT_1 (HMM E-Value=3e-16)
Length = 904
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 444 HRWIYCSNKSLQFHCHWRQPRI 509
H W N L+ HC WR+ R+
Sbjct: 238 HAWEQTFNTVLESHCPWREKRV 259
>SB_8962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 316 EIDAAAELIDFFRFNVHFLKENSKYQPISE 405
E A E+++ F+F+ +FL+ KY+ I +
Sbjct: 73 EAGNAEEILNIFKFDENFLENEEKYKEIKQ 102
>SB_4995| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.062)
Length = 516
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 RQSLNAATI-LGQSKSVIQAEIDAAAELIDFFRFNVHFLKENSKYQPISESPTITKNSLR 435
RQ A + L Q + +A+ E I F + KEN + +SE+ T TK +
Sbjct: 86 RQEQKLANLKLQQELNATKAKEAVYKEAISLEEFELPIEKENLISRFLSEAQT-TKPVIT 144
Query: 436 FRGIDGFIAAISPFNFTAIGGNLAYT 513
D + +SPFNF +L YT
Sbjct: 145 ----DPIQSCLSPFNFPNTESSLVYT 166
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.131 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,933,657
Number of Sequences: 59808
Number of extensions: 280582
Number of successful extensions: 893
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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