Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31945
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    29   0.022
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.5  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   4.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   10.0 
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   10.0 

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 0.022
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 420 GYCGTLRNRLIF*IFLQEVYIKTEKINKFSCS-INFSLNY*FRLSKYGRSIEALSIRTG 247
           GYC +L N +I+    ++      +I  F CS +N  +   F  S+YG  I    I+ G
Sbjct: 416 GYCNSLLNPIIYATLNRDFRKPFREILYFRCSNLNHMMREEFYQSQYGDPINNCEIKAG 474


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = +1

Query: 220 IWQTAAELMAGAYRQSLNAATILGQSKSVIQAEIDAAAELIDFFRFNVHFLKENSKYQP 396
           +W      M+G     +  A I+  + +VI A +        F   N HF   NS+  P
Sbjct: 162 VWIYGGGFMSGTATLDVYNADIMAATSNVIIASMQYRVGAFGFLYLNKHF--TNSEEAP 218


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = +1

Query: 220 IWQTAAELMAGAYRQSLNAATILGQSKSVIQAEIDAAAELIDFFRFNVHFLKENSKYQP 396
           +W      M+G     +  A I+  + +VI A +        F   N HF   NS+  P
Sbjct: 162 VWIYGGGFMSGTATLDVYNADIMAATSNVIIASMQYRVGAFGFLYLNKHF--TNSEEAP 218


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
          protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 60 NIFSGNYNWYVFNY*SGS 7
          NIF   Y W  F+Y  GS
Sbjct: 30 NIFQVKYQWKYFDYNFGS 47


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 98  ITQKR*LNITMPVKKQLKRRFKRLSMLKLV 187
           I+  R L +T P+    +RR KRL+ L +V
Sbjct: 132 ISIDRYLAVTQPLIYSRRRRSKRLAGLMIV 161


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = +1

Query: 46   AGKNITEGEPRYQVMPHDHSKKIAKYYYASEKTIEKAIQASVDAQTRWDRTPLTE 210
            AG + + G  +   +P D S+ I     A+   ++  I++S++     D+  +TE
Sbjct: 1251 AGTSNSRGAAQMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQRAMTE 1305


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 118 KYYYASEKTIEKAIQASVDAQTRWDRTP 201
           +YY + +    K +  + + +  WD TP
Sbjct: 392 RYYGSLQAAARKLLGNAPEVENIWDYTP 419


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated
          chloride channel protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -2

Query: 80 YRGSPSVIFFPAITIGTSSITE 15
          + G P++++F    +   SI E
Sbjct: 25 FLGQPTIVYFHVTVLSIDSINE 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.131    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,586
Number of Sequences: 438
Number of extensions: 2391
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)