Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31945
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g27440.1 68414.m03345 exostosin family protein contains Pfam ...    30   1.1  
At5g66820.1 68418.m08425 expressed protein                             29   1.4  
At1g48740.1 68414.m05454 expressed protein                             29   2.5  
At5g61840.1 68418.m07759 exostosin family protein contains Pfam ...    27   7.5  
At2g24220.1 68415.m02893 purine permease-related low similarity ...    27   9.9  

>At1g27440.1 68414.m03345 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 412

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 55  NITEGEPRYQVMPHDHSKKIAKYYYASEKTIEKAI 159
           N TEG   + V+PHD     A ++Y  EK IE+ I
Sbjct: 139 NRTEGADHFFVVPHDFG---ACFHYQEEKAIERGI 170


>At5g66820.1 68418.m08425 expressed protein 
          Length = 519

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = +1

Query: 229 TAAELMAGAYRQSLNAATILGQSKSVIQAEIDAAAELIDFFRFNVHFLKENSK 387
           TA  LM   Y++ +       ++K    A + AAA LI  F FN HF++EN+K
Sbjct: 232 TAPVLMLSLYKKPV----FWVRTKKFAIAVLIAAALLILIFCFNDHFIEENNK 280


>At1g48740.1 68414.m05454 expressed protein
          Length = 393

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 378 FLQEVYIKTEKINKFSCSINFSLNY*FRLSKYG 280
           F+Q++ ++ E I K+    NF +   + +SKYG
Sbjct: 164 FIQKLIVEVENIGKWVHETNFPIRRPYHMSKYG 196


>At5g61840.1 68418.m07759 exostosin family protein contains Pfam
           profile: PF03016 exostosin family ;supported by cDNA
           gi|23821293|dbj|AB080693.1|;
          Length = 415

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 55  NITEGEPRYQVMPHDHSKKIAKYYYASEKTIEKAI 159
           N TEG   + V+PHD     A ++Y  EK I + I
Sbjct: 142 NRTEGADHFFVVPHDFG---ACFHYQEEKAIGRGI 173


>At2g24220.1 68415.m02893 purine permease-related low similarity to
           purine permease [Arabidopsis thaliana] GI:7620007;
           contains Pfam profile PF03151: Domain of unknown
           function, DUF250
          Length = 315

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 388 YQPISESPTITKNSLRFRGIDGFIAAISPFNFTAIGGNLAYT 513
           Y P S S  +  +SL F  + G++   +P N + I   +  T
Sbjct: 83  YLPASTSSLLASSSLAFSALFGYLIVKNPLNASVINSIVVIT 124


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.317    0.131    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,580,327
Number of Sequences: 28952
Number of extensions: 199870
Number of successful extensions: 462
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)