Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31941
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor...   253   2e-66
UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA...    49   6e-05
UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila pseudoobscu...    39   0.059
UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gamb...    37   0.24 
UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-P...    37   0.31 
UniRef50_UPI0000D56366 Cluster: PREDICTED: similar to CG30042-PA...    34   1.7  
UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;...    32   8.9  

>UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor;
           n=1; Bombyx mori|Rep: Larval cuticle protein LCP-30
           precursor - Bombyx mori (Silk moth)
          Length = 239

 Score =  253 bits (619), Expect = 2e-66
 Identities = 124/172 (72%), Positives = 124/172 (72%)
 Frame = +1

Query: 1   VALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYNXX 180
           VALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN  
Sbjct: 13  VALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYNGD 72

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXKEDLSKYLGDAYKGSSIXXXXXXXXXXXXXXXX 360
                                      KEDLSKYLGDAYKGSSI                
Sbjct: 73  RGDRGAAGGFYTGSGTAGGPGGAYVGTKEDLSKYLGDAYKGSSIVPLPVVKPTIPVPVTP 132

Query: 361 XXXASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETENK 516
              ASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETENK
Sbjct: 133 TYVASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETENK 184


>UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 275

 Score = 49.2 bits (112), Expect = 6e-05
 Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
 Frame = +1

Query: 394 YVASKVVPPSGAGY--DYKYGIIRYDNDVAPEGYHYLYETENK 516
           YVA+ V   SGAGY  +  Y IIR +  V P+GYHY+YETENK
Sbjct: 158 YVATPV-QGSGAGYYDNRNYAIIRKEEQVEPDGYHYVYETENK 199



 Score = 31.9 bits (69), Expect = 8.9
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 133 NSGRYIPDNSGAYN 174
           N GRY PDNSGAYN
Sbjct: 25  NDGRYYPDNSGAYN 38


>UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila
           pseudoobscura|Rep: GA15599-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 264

 Score = 39.1 bits (87), Expect = 0.059
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +1

Query: 445 YGIIRYDNDVAPEGYHYLYETEN 513
           + IIR ++DV  +GYHYLYETEN
Sbjct: 164 WAIIRLEDDVEQDGYHYLYETEN 186


>UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000023169 - Anopheles gambiae
           str. PEST
          Length = 232

 Score = 37.1 bits (82), Expect = 0.24
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +1

Query: 379 VVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETEN 513
           V T   +A   V P  A     + IIR +N V  +GYHY++ETEN
Sbjct: 151 VPTLARIAQVKVAPKPAYAPDGWKIIRLENQVENDGYHYVFETEN 195


>UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 259

 Score = 36.7 bits (81), Expect = 0.31
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +1

Query: 445 YGIIRYDNDVAPEGYHYLYETEN 513
           + IIR ++DV  +GYHYL+ETEN
Sbjct: 159 WAIIRQEDDVEVDGYHYLWETEN 181


>UniRef50_UPI0000D56366 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 210

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +1

Query: 442 KYGIIRYDNDVAPEGYHYLYETENK 516
           K+ IIR   DV  +GYH+ YETENK
Sbjct: 110 KWKIIRQLGDVDTDGYHWEYETENK 134


>UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 645

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 406 CWQRMWV*PPCWQRMWV*LAREW*ASRRAGEQCW 305
           CWQR+ V   CWQR+ V +   W  +   GE CW
Sbjct: 78  CWQRVGVEEECWQRV-VAVEESWQRAGVVGE-CW 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.312    0.134    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,483,684
Number of Sequences: 1657284
Number of extensions: 6852900
Number of successful extensions: 15232
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15184
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)