Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31940
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   1.6  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.6  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 102 YHHDGTCWASRDD 64
           Y +DGT W S DD
Sbjct: 306 YKYDGTNWVSYDD 318


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 18  LLTIVACCHHGRSHKCRHERPSK 86
           L TIV C   G   KC   RP++
Sbjct: 242 LATIVGCGTDGTMIKCLKSRPAR 264


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 18  LLTIVACCHHGRSHKCRHERPSK 86
           L TIV C   G   KC   RP++
Sbjct: 242 LATIVGCGTDGTMIKCLKSRPAR 264


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -3

Query: 52  RPWWQHATIVKRVRNSK 2
           RPWW+    V  + N++
Sbjct: 72  RPWWERYQPVSYILNTR 88


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -3

Query: 52  RPWWQHATIVKRVRNSK 2
           RPWW+    V  + N++
Sbjct: 73  RPWWERYQPVSYILNTR 89


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -3

Query: 52  RPWWQHATIVKRVRNSK 2
           RPWW+    V  + N++
Sbjct: 73  RPWWERYQPVSYILNTR 89


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 294 TARNCRSRTFHECPRFHNRC 235
           TA +CRS TF      +N C
Sbjct: 385 TANSCRSSTFRNNRDEYNVC 404


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = +1

Query: 55  PINVVTRGPASAVMVVNSAAKGAGGQNAPASRNTERI*TNN 177
           P++V T  P        S    +   +  ++ +TE+  TNN
Sbjct: 146 PLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNN 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,411
Number of Sequences: 336
Number of extensions: 2392
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)