Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31940
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g10680.1 68416.m01284 heat shock protein-related contains wea...    34   0.065
At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock pro...    31   0.35 
At5g52780.1 68418.m06550 expressed protein similar to unknown pr...    30   1.1  
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei...    28   4.3  
At1g66980.1 68414.m07616 protein kinase family protein / glycero...    27   5.7  
At5g13700.1 68418.m01595 polyamine oxidase, putative similar to ...    27   9.9  

>At3g10680.1 68416.m01284 heat shock protein-related contains weak
           similarity to Pfam profile PF00011: Hsp20/alpha
           crystallin family
          Length = 490

 Score = 33.9 bits (74), Expect = 0.065
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
 Frame = +3

Query: 282 SYALFIPLPGVTADDIIVKS--KYRYVYITARRPLPLKP---YTEIKRLPKLVDVTQAYW 446
           S  L++ LPG   D I +K   + R V I  +RPL  +    ++E  R+P   D+T+   
Sbjct: 38  SIFLYVNLPGFYRDQIEIKKDERTRTVQIQGQRPLSAQTKARFSEAYRVPDTCDMTKLST 97

Query: 447 EYEDNELTVRF 479
            +    LT+ F
Sbjct: 98  SFSHGLLTIEF 108


>At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock
           protein (HSP26.5-P) contains Pfam profile: PF00011
           Hsp20/alpha crystallin family: identified in Scharf,
           K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237.
          Length = 134

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
 Frame = +3

Query: 237 NDYENAGTREMFGTYSYALFIPLPGVTADDIIVKSKYR-YVYI-TARRPL-----PLKPY 395
           N+Y+    R      S+   + LPG+  ++I V+ +   Y+ I T   P+     PLK +
Sbjct: 21  NNYQENHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTF 80

Query: 396 TEIKRLPKLVDVTQAYWEYEDNELTV 473
               RLP+ +D+      YED  LTV
Sbjct: 81  KRKFRLPESIDMIGISAGYEDGVLTV 106


>At5g52780.1 68418.m06550 expressed protein similar to unknown
           protein (pir||T04431)
          Length = 168

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -2

Query: 314 NSRERYEQRVTVGPEHFTSARVFIIVAQPPKTVVDSLQVPAQVFD 180
           N++ R+E ++  GP+ F S+R      +P     D   +P +VF+
Sbjct: 34  NNKPRWESKLHAGPKGFQSSRTSEKPGRPDPDPEDDPPIPQEVFE 78


>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
           hsp20 family protein contains Pfam profile: PF00011
           Hsp20/alpha crystallin family
          Length = 285

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 276 TYSYALFIPLPGVTADDIIVKSKYRYVYITARR 374
           T+SY + I LPG + +DI V+     + +T RR
Sbjct: 194 THSYVVAIELPGASINDIRVEVDNTNLTVTGRR 226


>At1g66980.1 68414.m07616 protein kinase family protein /
           glycerophosphoryl diester phosphodiesterase family
           protein similar to leaf rust resistance kinase Lr10
           GI:1680685 from [Triticum aestivum]; contains Pfam
           profiles PF03009: Glycerophosphoryl diester
           phosphodiesterase family, PF00069: Protein kinase domain
          Length = 1109

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 3   LLFLTLLTIVACCHHGRSHKCRHER 77
           +LFL LLT+V C H  R  + R ++
Sbjct: 752 VLFLVLLTLVFCFHRKRETRLRQQK 776


>At5g13700.1 68418.m01595 polyamine oxidase, putative similar to
           SP|O64411 Polyamine oxidase precursor (EC 1.5.3.11) from
           Zea mays
          Length = 472

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 86  VPSWW*TRLQRGQVDRTPRLQE 151
           VP WW  R QRG     P + +
Sbjct: 365 VPRWWNNRFQRGSYSNYPMISD 386


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,480,453
Number of Sequences: 28952
Number of extensions: 209673
Number of successful extensions: 554
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)